MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NZ_CP117235 Location: 1927008..1928228 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP117235 Location: 1927008..1928228 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ28_RS09490 (1922039) | 1922039..1923397 | + | 1359 | WP_000019194.1 | putrescine/proton symporter PlaP | - |
| PQQ28_RS09495 (1923471) | 1923471..1924898 | - | 1428 | WP_000980604.1 | exodeoxyribonuclease I | - |
| PQQ28_RS09500 (1925107) | 1925107..1926273 | + | 1167 | WP_001297905.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| PQQ28_RS09505 (1926471) | 1926471..1926989 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| PQQ28_RS09510 (1927008) | 1927008..1928228 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| PQQ28_RS09515 (1928285) | 1928285..1928758 | + | 474 | WP_001105376.1 | DNA gyrase inhibitor SbmC | - |
| PQQ28_RS09520 (1928956) | 1928956..1930014 | + | 1059 | WP_001200890.1 | FUSC family protein | - |
| PQQ28_RS09525 (1930186) | 1930186..1930515 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| PQQ28_RS09530 (1930616) | 1930616..1930972 | - | 357 | WP_000929389.1 | EutP/PduV family microcompartment system protein | - |
| PQQ28_RS09535 (1931287) | 1931287..1931367 | - | 81 | Protein_1792 | hypothetical protein | - |
| PQQ28_RS09540 (1931413) | 1931413..1931607 | - | 195 | WP_000988601.1 | DUF5983 family protein | - |
| PQQ28_RS09545 (1931604) | 1931604..1931978 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| PQQ28_RS09550 (1932067) | 1932067..1932435 | - | 369 | WP_001285586.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PQQ28_RS09555 (1932509) | 1932509..1932730 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | IS/Tn | TA47049 | NZ_CP007799 | 4503424..4504644 | 0 |