NZ_CP1172011..196862

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 196862 bp
Accession: NZ_CP117201        Location: 1..196862         Organism: Pantoea sp. SS70       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PO881_RS23145 (PO881_23145) 1..2937 + 2937 WP_280173414.1 hypothetical protein -
PO881_RS23150 (PO881_23150) 2939..3388 + 450 WP_280173415.1 hypothetical protein -
PO881_RS23155 (PO881_23155) 3388..4548 + 1161 WP_280173416.1 hypothetical protein -
PO881_RS23160 (PO881_23160) 4668..5570 - 903 WP_280173417.1 ISNCY family transposase ISRor2 VF
PO881_RS23165 (PO881_23165) 5574..6689 - 1116 WP_280173418.1 conjugal transfer protein TraE -
PO881_RS23170 (PO881_23170) 6918..9152 - 2235 WP_280173419.1 P-loop NTPase fold protein -
PO881_RS23175 (PO881_23175) 9154..10239 - 1086 WP_280173420.1 hypothetical protein -
PO881_RS23180 (PO881_23180) 10693..10920 + 228 WP_280173421.1 EexN family lipoprotein -
PO881_RS23185 (PO881_23185) 11270..11647 + 378 WP_280173422.1 peptidase -
PO881_RS23190 (PO881_23190) 11650..12912 + 1263 WP_280173423.1 translesion error-prone DNA polymerase V subunit UmuC -
PO881_RS23195 (PO881_23195) 13069..13737 - 669 WP_280173424.1 SOS response-associated peptidase family protein -
PO881_RS23200 (PO881_23200) 13792..14037 + 246 WP_280173425.1 DNA polymerase III subunit theta -
PO881_RS23205 (PO881_23205) 14093..14326 - 234 WP_280173426.1 hypothetical protein -
PO881_RS23210 (PO881_23210) 14349..14882 - 534 Protein_13 ISNCY family transposase ISRor2 VF
PO881_RS23215 (PO881_23215) 15023..15283 + 261 WP_280173427.1 hypothetical protein -
PO881_RS23220 (PO881_23220) 16292..16603 - 312 WP_280173428.1 hypothetical protein -
PO881_RS23225 (PO881_23225) 17147..17386 - 240 WP_280173429.1 hypothetical protein -
PO881_RS23230 (PO881_23230) 18393..18650 + 258 WP_280173430.1 hypothetical protein -
PO881_RS23235 (PO881_23235) 18933..19175 + 243 WP_280173431.1 regulatory protein YcgZ -
PO881_RS23240 (PO881_23240) 19282..19554 + 273 WP_280173432.1 hypothetical protein -
PO881_RS23245 (PO881_23245) 20042..20239 - 198 WP_280173433.1 hypothetical protein -
PO881_RS23250 (PO881_23250) 20311..20571 - 261 WP_280173434.1 hypothetical protein -
PO881_RS23255 (PO881_23255) 21037..21309 + 273 WP_280173435.1 hypothetical protein -
PO881_RS23260 (PO881_23260) 21390..22550 - 1161 WP_280173436.1 diguanylate phosphodiesterase -
PO881_RS23265 (PO881_23265) 22791..23042 + 252 WP_280173437.1 antitoxin -
PO881_RS23270 (PO881_23270) 23039..23324 + 286 Protein_25 type II toxin-antitoxin system RelE/ParE family toxin -
PO881_RS23275 (PO881_23275) 23785..24243 + 459 WP_280173438.1 helix-turn-helix domain-containing protein Antitoxin Detail
PO881_RS23280 (PO881_23280) 24240..24815 + 576 WP_280173439.1 PIN domain-containing protein Toxin Detail
PO881_RS23285 (PO881_23285) 24824..25858 - 1035 WP_280173440.1 tyrosine-type recombinase/integrase -
PO881_RS23290 (PO881_23290) 26720..27634 + 915 WP_280173441.1 hypothetical protein -
PO881_RS23295 (PO881_23295) 27679..28290 + 612 WP_280173442.1 hypothetical protein -
PO881_RS23300 (PO881_23300) 28722..29792 - 1071 Protein_31 alanine racemase -
PO881_RS23305 (PO881_23305) 29802..31010 - 1209 Protein_32 D-amino acid dehydrogenase -
PO881_RS23310 (PO881_23310) 31660..33936 + 2277 WP_280173443.1 ATP-binding protein -
PO881_RS23315 (PO881_23315) 34061..36373 + 2313 WP_280173444.1 Sensor histidine kinase RcsC VF
PO881_RS23320 (PO881_23320) 36339..37043 - 705 WP_280173445.1 Transcriptional regulatory protein RcsB VF
PO881_RS23325 (PO881_23325) 37621..38010 + 390 WP_280173446.1 hypothetical protein -
PO881_RS23330 (PO881_23330) 38018..38845 + 828 WP_280173447.1 hypothetical protein VF
PO881_RS23335 (PO881_23335) 38842..40230 + 1389 WP_280173448.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
PO881_RS23340 (PO881_23340) 40530..41066 + 537 WP_280173449.1 hypothetical protein -
PO881_RS23345 (PO881_23345) 41091..41615 + 525 WP_280173450.1 fimbrial protein -
PO881_RS23350 (PO881_23350) 41674..42399 + 726 WP_280173451.1 putative fimbrial chaperone LpfB VF
PO881_RS23355 (PO881_23355) 42536..45046 + 2511 WP_280173452.1 Outer membrane usher protein FimD VF
PO881_RS23360 (PO881_23360) 45048..46127 + 1080 WP_280173453.1 hypothetical protein -
PO881_RS23365 (PO881_23365) 46146..46766 + 621 WP_280173454.1 response regulator transcription factor -
PO881_RS23370 (PO881_23370) 47084..47374 - 291 Protein_45 IS3 family transposase -
PO881_RS23375 (PO881_23375) 47648..48388 + 741 WP_280173455.1 hypothetical protein -
PO881_RS23380 (PO881_23380) 48492..48773 + 282 Protein_47 IS3 family transposase ISAs6 Transposase
PO881_RS23385 (PO881_23385) 48875..49123 + 249 Protein_48 integrase core domain-containing protein -
PO881_RS23390 (PO881_23390) 50227..51129 - 903 WP_280173456.1 hypothetical protein VF
PO881_RS23395 (PO881_23395) 51379..51939 + 561 WP_280173457.1 Tn3 family transposase TnpR_ISMex38 Transposase
PO881_RS23400 (PO881_23400) 51923..53587 + 1665 Protein_51 IS481 family transposase ISAzs36 Transposase
PO881_RS23405 (PO881_23405) 53520..54545 + 1026 Protein_52 IS481 family transposase ISAzs36 VF
PO881_RS23410 (PO881_23410) 55406..56125 - 720 WP_280173458.1 hypothetical protein -
PO881_RS23415 (PO881_23415) 56671..57234 + 564 WP_280173459.1 hypothetical protein -
PO881_RS23420 (PO881_23420) 57994..58485 + 492 WP_280173460.1 type VI secretion system tube protein Hcp -
PO881_RS23425 (PO881_23425) 58678..59160 + 483 WP_280173461.1 hypothetical protein VF
PO881_RS23430 (PO881_23430) 59157..60638 + 1482 WP_280173462.1 hypothetical protein VF
PO881_RS23435 (PO881_23435) 61052..61468 + 417 WP_280173463.1 hypothetical protein -
PO881_RS23440 (PO881_23440) 61476..63275 + 1800 WP_280173464.1 type VI secretion system baseplate subunit TssF -
PO881_RS23445 (PO881_23445) 63266..64219 + 954 WP_280173465.1 type VI secretion system baseplate subunit TssG -
PO881_RS23450 (PO881_23450) 64207..66150 + 1944 WP_280173466.1 type VI secretion system tip protein TssI/VgrG -
PO881_RS23455 (PO881_23455) 66163..66462 + 300 WP_280173467.1 PAAR domain-containing protein -
PO881_RS23460 (PO881_23460) 66470..67522 + 1053 WP_280173468.1 type VI secretion system protein TssA -
PO881_RS23465 (PO881_23465) 67528..68112 + 585 WP_280173469.1 hypothetical protein VF
PO881_RS23470 (PO881_23470) 68114..69505 + 1392 WP_280173470.1 hypothetical protein VF
PO881_RS23475 (PO881_23475) 69505..70122 + 618 WP_280173471.1 hypothetical protein VF
PO881_RS23480 (PO881_23480) 70277..73564 + 3288 WP_280173472.1 hypothetical protein VF
PO881_RS23485 (PO881_23485) 73574..76120 + 2547 WP_280173473.1 Protein ClpV1 VF
PO881_RS23490 (PO881_23490) 76117..77412 + 1296 WP_280173474.1 VasL domain-containing protein -
PO881_RS23495 (PO881_23495) 77733..78242 + 510 WP_280173475.1 hypothetical protein -
PO881_RS23500 (PO881_23500) 79168..79425 - 258 WP_280173476.1 hypothetical protein -
PO881_RS23505 (PO881_23505) 79980..80615 - 636 WP_280173477.1 hypothetical protein -
PO881_RS23510 (PO881_23510) 81156..81269 + 114 Protein_73 IS3 family transposase ISEhe4 Transposase
PO881_RS23515 (PO881_23515) 81761..83293 - 1533 Protein_74 IS3 family transposase ISKpn38 Transposase
PO881_RS23520 (PO881_23520) 83446..83787 + 342 WP_280173478.1 recombinase family protein -
PO881_RS23525 (PO881_23525) 84570..86231 + 1662 WP_280173479.1 hypothetical protein VF
PO881_RS23530 (PO881_23530) 87995..90121 - 2127 WP_280173485.1 hypothetical protein VF
PO881_RS23535 (PO881_23535) 90649..90888 - 240 WP_280173486.1 transcriptional regulator -
PO881_RS23540 (PO881_23540) 91246..91455 + 210 WP_280173480.1 DUF3606 domain-containing protein -
PO881_RS23545 (PO881_23545) 91449..92906 - 1458 WP_280173481.1 hypothetical protein VF
PO881_RS23550 (PO881_23550) 93247..95028 + 1782 WP_280173482.1 hypothetical protein VF
PO881_RS23555 (PO881_23555) 95918..96208 - 291 WP_280173483.1 hypothetical protein -
PO881_RS23560 (PO881_23560) 96478..98052 - 1575 WP_280173484.1 hypothetical protein VF
PO881_RS23565 (PO881_23565) 98465..98919 - 455 Protein_84 IS3 family transposase -
PO881_RS23570 (PO881_23570) 98936..99646 + 711 WP_280173329.1 tyrosine-type recombinase/integrase -
PO881_RS23575 (PO881_23575) 99803..100021 + 219 WP_280173330.1 hypothetical protein -
PO881_RS23580 (PO881_23580) 100236..100823 - 588 WP_280173331.1 hypothetical protein -
PO881_RS23585 (PO881_23585) 100820..101527 - 708 WP_280173332.1 hypothetical protein -
PO881_RS23590 (PO881_23590) 101846..102409 + 564 WP_280173333.1 hypothetical protein -
PO881_RS23595 (PO881_23595) 103816..104889 - 1074 WP_280173334.1 RepB family plasmid replication initiator protein -
PO881_RS23600 (PO881_23600) 106200..107245 + 1046 Protein_91 IS3 family transposase -
PO881_RS23605 (PO881_23605) 107484..108467 - 984 WP_280173335.1 ParB family protein -
PO881_RS23610 (PO881_23610) 108464..109672 - 1209 WP_280173336.1 Plasmid partition protein A VF
PO881_RS23615 (PO881_23615) 110845..112119 - 1275 WP_280173487.1 translesion error-prone DNA polymerase V subunit UmuC -
PO881_RS23620 (PO881_23620) 112128..112577 - 450 WP_280173337.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
PO881_RS23625 (PO881_23625) 113894..114688 - 795 WP_280173338.1 malate dehydrogenase -
PO881_RS23630 (PO881_23630) 114799..115569 - 771 WP_280173339.1 hypothetical protein -
PO881_RS23635 (PO881_23635) 115733..116104 + 372 WP_280173340.1 hypothetical protein -
PO881_RS23640 (PO881_23640) 116173..116787 - 615 WP_280173341.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
PO881_RS23645 (PO881_23645) 117690..119234 + 1545 WP_280173342.1 hypothetical protein VF
PO881_RS23650 (PO881_23650) 119483..120232 - 750 WP_147199095.1 alpha/beta hydrolase -
PO881_RS23655 (PO881_23655) 120471..120701 - 231 WP_280173343.1 hypothetical protein -
PO881_RS23660 (PO881_23660) 120999..121928 + 930 WP_280173344.1 DUF1281 domain-containing protein -
PO881_RS23665 (PO881_23665) 121965..122210 + 246 WP_280173345.1 hypothetical protein -
PO881_RS23670 (PO881_23670) 122531..123175 + 645 WP_280173346.1 DNA methyltransferase -
PO881_RS23675 (PO881_23675) 123189..123422 + 234 WP_280173347.1 hypothetical protein -
PO881_RS23680 (PO881_23680) 123739..124377 + 639 WP_280173348.1 TetR/AcrR family transcriptional regulator -
PO881_RS23685 (PO881_23685) 124719..124898 - 180 WP_280173349.1 GrpB family protein -
PO881_RS23690 (PO881_23690) 124990..126125 + 1136 WP_277975161.1 IS3 family transposase ISEc15 Transposase
PO881_RS23695 (PO881_23695) 126281..126649 - 369 WP_280173350.1 DUF4440 domain-containing protein -
PO881_RS23700 (PO881_23700) 126795..127766 - 972 WP_280173351.1 IS110 family transposase ISOt5 Transposase
PO881_RS23705 (PO881_23705) 128382..128816 + 435 WP_280173352.1 antirestriction protein -
PO881_RS23710 (PO881_23710) 128860..129237 + 378 WP_280173353.1 DUF1380 family protein -
PO881_RS23715 (PO881_23715) 130217..130735 + 519 WP_280173488.1 JAB domain-containing protein -
PO881_RS23720 (PO881_23720) 130831..131277 + 447 WP_280173354.1 conjugation system SOS inhibitor PsiB family protein -
PO881_RS23725 (PO881_23725) 131274..132026 + 753 WP_280173355.1 plasmid SOS inhibition protein A -
PO881_RS23730 (PO881_23730) 132080..132424 + 345 WP_094111544.1 toxin Toxin Detail
PO881_RS23735 (PO881_23735) 132417..132731 + 315 WP_280173356.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin Detail
PO881_RS23740 (PO881_23740) 132810..133208 + 399 WP_280173357.1 hypothetical protein -
PO881_RS23745 (PO881_23745) 133685..134422 + 738 WP_280173358.1 DUF905 family protein -
PO881_RS23750 (PO881_23750) 134507..134656 + 150 WP_280173359.1 succinate dehydrogenase flavoprotein subunit -
PO881_RS23755 (PO881_23755) 134653..135225 + 573 WP_280173360.1 hypothetical protein -
PO881_RS23760 (PO881_23760) 135316..135642 + 327 WP_280173361.1 hypothetical protein -
PO881_RS23765 (PO881_23765) 135647..135838 + 192 WP_280173362.1 hypothetical protein -
PO881_RS23770 (PO881_23770) 136553..136813 + 261 WP_280173363.1 hypothetical protein -
PO881_RS23775 (PO881_23775) 136912..137160 + 249 WP_222235171.1 hypothetical protein -
PO881_RS23780 (PO881_23780) 137224..138045 + 822 WP_280173489.1 DUF932 domain-containing protein -
PO881_RS23785 (PO881_23785) 138087..138416 - 330 WP_280173364.1 hypothetical protein -
PO881_RS23790 (PO881_23790) 138673..139014 + 342 WP_280173365.1 plasmid mobilization protein MobA -
PO881_RS23795 (PO881_23795) 139014..140981 + 1968 WP_280173366.1 hypothetical protein Relaxase
PO881_RS23800 (PO881_23800) 141092..141619 + 528 WP_280173367.1 hypothetical protein -
PO881_RS23805 (PO881_23805) 141846..142052 + 207 WP_280173368.1 TraY domain-containing protein -
PO881_RS23810 (PO881_23810) 142654..143076 + 423 WP_280173369.1 HNH endonuclease -
PO881_RS23815 (PO881_23815) 143203..143808 + 606 WP_280173370.1 hypothetical protein -
PO881_RS23820 (PO881_23820) 144136..145182 + 1047 WP_280173371.1 hypothetical protein VF
PO881_RS23825 (PO881_23825) 145185..146894 + 1710 WP_280173372.1 hypothetical protein VF
PO881_RS23830 (PO881_23830) 146900..148255 + 1356 WP_280173373.1 type 4b pilus protein PilO2 -
PO881_RS23835 (PO881_23835) 148242..148667 + 426 WP_280173374.1 type IV pilus biogenesis protein PilP -
PO881_RS23840 (PO881_23840) 148677..150197 + 1521 WP_280173375.1 hypothetical protein VF
PO881_RS23845 (PO881_23845) 150194..151261 + 1068 WP_280173376.1 type II secretion system F family protein -
PO881_RS23850 (PO881_23850) 151361..151864 + 504 WP_222213928.1 hypothetical protein VF
PO881_RS23855 (PO881_23855) 151911..152849 + 939 WP_280173377.1 hypothetical protein VF
PO881_RS23860 (PO881_23860) 152862..154082 + 1221 WP_280173490.1 shufflon system plasmid conjugative transfer pilus tip adhesin PilV -
PO881_RS23865 (PO881_23865) 154362..155483 + 1122 WP_280173378.1 site-specific integrase -
PO881_RS23870 (PO881_23870) 155593..156021 + 429 WP_280173379.1 type IV pilus biogenesis protein PilM -
PO881_RS23875 (PO881_23875) 156023..156637 + 615 WP_280173380.1 prepilin peptidase -
PO881_RS23880 (PO881_23880) 156622..157095 + 474 WP_280173381.1 hypothetical protein VF
PO881_RS23885 (PO881_23885) 157158..157628 + 471 WP_280173382.1 hypothetical protein VF
PO881_RS23890 (PO881_23890) 157680..158153 + 474 WP_280173383.1 hypothetical protein VF
PO881_RS23895 (PO881_23895) 158150..158974 + 825 WP_280173384.1 hypothetical protein VF
PO881_RS23900 (PO881_23900) 158974..160140 + 1167 WP_280173385.1 hypothetical protein VF
PO881_RS23905 (PO881_23905) 160137..160427 + 291 WP_280173386.1 conjugal transfer protein -
PO881_RS23910 (PO881_23910) 160458..165128 + 4671 WP_280173387.1 DUF5710 domain-containing protein -
PO881_RS23915 (PO881_23915) 165154..165501 + 348 WP_280173388.1 conjugal transfer protein -
PO881_RS23920 (PO881_23920) 165512..166204 + 693 WP_280173389.1 hypothetical protein VF
PO881_RS23925 (PO881_23925) 166209..167216 + 1008 WP_280173390.1 DotH/IcmK family type IV secretion protein -
PO881_RS23930 (PO881_23930) 167219..168523 + 1305 WP_280173391.1 hypothetical protein VF
PO881_RS23935 (PO881_23935) 168516..169262 + 747 WP_280173392.1 conjugal transfer protein TraP -
PO881_RS23940 (PO881_23940) 169272..169811 + 540 WP_280173393.1 conjugal transfer protein TraQ -
PO881_RS23945 (PO881_23945) 169889..170275 + 387 WP_280173394.1 conjugal transfer protein -
PO881_RS23950 (PO881_23950) 170367..170990 + 624 WP_280173395.1 conjugal transfer protein -
PO881_RS23955 (PO881_23955) 170962..174012 + 3051 WP_280173396.1 ATP-binding protein -
PO881_RS23960 (PO881_23960) 174031..175254 + 1224 WP_280173397.1 conjugal transfer protein TraW -
PO881_RS23965 (PO881_23965) 175273..176034 + 762 WP_280173398.1 prepilin peptidase-dependent protein -
PO881_RS23970 (PO881_23970) 176031..176603 + 573 WP_280173399.1 conjugal transfer protein TraX -
PO881_RS23975 (PO881_23975) 176615..176791 + 177 WP_280173400.1 hypothetical protein -
PO881_RS23980 (PO881_23980) 176772..176990 + 219 WP_280173401.1 hypothetical protein -
PO881_RS23985 (PO881_23985) 177020..177442 + 423 WP_280173402.1 hypothetical protein -
PO881_RS23990 (PO881_23990) 177439..177642 + 204 WP_222213606.1 Hha/YmoA family nucleoid-associated regulatory protein -
PO881_RS23995 (PO881_23995) 177731..179869 + 2139 WP_280173403.1 DotA/TraY family protein -
PO881_RS24000 (PO881_24000) 179936..180598 + 663 WP_280173404.1 plasmid IncI1-type surface exclusion protein ExcA -
PO881_RS24005 (PO881_24005) 180709..181923 + 1215 WP_280173405.1 conjugal transfer protein -
PO881_RS24010 (PO881_24010) 181939..183081 + 1143 WP_280173406.1 thioredoxin fold domain-containing protein -
PO881_RS24015 (PO881_24015) 183068..185260 + 2193 WP_280173407.1 hypothetical protein VF
PO881_RS24020 (PO881_24020) 185515..186021 + 507 WP_280173491.1 hypothetical protein VF
PO881_RS24025 (PO881_24025) 186156..186410 + 255 WP_280173408.1 replication regulatory protein RepA -
PO881_RS24030 (PO881_24030) 186702..187568 + 867 WP_280173409.1 plasmid replication initiator RepA -
PO881_RS24035 (PO881_24035) 188838..189755 - 918 WP_010670295.1 AraC family transcriptional regulator -
PO881_RS24040 (PO881_24040) 189770..190921 + 1152 WP_262419640.1 aldo/keto reductase -
PO881_RS24045 (PO881_24045) 191631..192650 + 1020 WP_280173410.1 LacI family DNA-binding transcriptional regulator -
PO881_RS24050 (PO881_24050) 193433..194170 - 738 WP_280173411.1 metallophosphoesterase -
PO881_RS24055 (PO881_24055) 194178..195179 - 1002 WP_280173492.1 IS110 family transposase IS1663 Transposase
PO881_RS24060 (PO881_24060) 195666..196028 + 363 WP_280173412.1 hypothetical protein -
PO881_RS24065 (PO881_24065) 196254..196490 + 237 WP_280173413.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance