MGE detailed information
MGE type: Prophage MGE length: 39729 bp
Accession: NZ_CP117033 Location: 2105754..2145482 Organism: Salmonella enterica strain PIW95_S14_0299 Replicon: chromosome
Accession: NZ_CP117033 Location: 2105754..2145482 Organism: Salmonella enterica strain PIW95_S14_0299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP07_RS10320 () | 2101947..2102843 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| PQP07_RS10325 () | 2103263..2103874 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PQP07_RS10330 () | 2103883..2104893 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PQP07_RS10335 () | 2104972..2105757 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| PQP07_RS10340 () | 2105754..2106509 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| PQP07_RS10345 () | 2106588..2107532 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PQP07_RS10350 () | 2107548..2108867 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| PQP07_RS10355 () | 2108984..2109955 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PQP07_RS10360 () | 2110028..2111470 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| PQP07_RS10365 () | 2111594..2112463 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| PQP07_RS10370 () | 2112805..2114280 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| PQP07_RS10375 () | 2114515..2116326 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PQP07_RS10380 () | 2116364..2117005 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP07_RS10385 () | 2117105..2118283 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP07_RS10390 () | 2118414..2118704 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP07_RS10395 () | 2118772..2119125 | + | 354 | WP_001042119.1 | protein YebF | - |
| PQP07_RS10400 () | 2119219..2119878 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| PQP07_RS10405 () | 2120091..2122142 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| PQP07_RS10410 () | 2122177..2122875 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PQP07_RS10415 () | 2122899..2123555 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| PQP07_RS10420 () | 2123663..2123893 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP07_RS10425 () | 2124031..2124405 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PQP07_RS10430 () | 2124406..2125281 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| PQP07_RS10435 () | 2125298..2125651 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2125751..2125896 | - | 146 | - | - | Antitoxin Detail |
| - | 2125791..2125894 | + | 104 | - | - | Toxin Detail |
| PQP07_RS10440 () | 2126025..2126948 | - | 924 | Protein_2042 | hypothetical protein ; Integrase | Integrase |
| PQP07_RS10445 () | 2127212..2127673 | - | 462 | Protein_2043 | DNA breaking-rejoining protein | - |
| PQP07_RS10450 () | 2127662..2127853 | + | 192 | Protein_2044 | glycoside hydrolase family 19 protein | - |
| PQP07_RS10455 () | 2127907..2128440 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| PQP07_RS10460 () | 2128697..2128864 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP07_RS10465 () | 2128929..2129117 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| PQP07_RS10470 () | 2129172..2129432 | + | 261 | Protein_2048 | DUF1441 family protein | - |
| PQP07_RS10475 () | 2129647..2129991 | + | 345 | Protein_2049 | macro domain-containing protein | - |
| PQP07_RS10480 () | 2130001..2130471 | + | 471 | Protein_2050 | tail fiber assembly protein | - |
| PQP07_RS10485 () | 2130568..2130768 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQP07_RS10490 () | 2131158..2131338 | - | 181 | Protein_2052 | IS3 family transposase | - |
| PQP07_RS10495 () | 2131338..2131463 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| PQP07_RS10500 () | 2131977..2132123 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| PQP07_RS10505 () | 2132117..2132284 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP07_RS10510 () | 2132611..2133225 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQP07_RS10515 () | 2133235..2133393 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP07_RS10520 () | 2133526..2134440 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| PQP07_RS10525 () | 2135753..2136175 | - | 423 | Protein_2059 | hypothetical protein ; Integrase | Integrase |
| PQP07_RS10530 () | 2136245..2137439 | + | 1195 | Protein_2060 | IS256 family transposase IS285 | Transposase |
| PQP07_RS10535 () | 2137585..2137725 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP07_RS10540 () | 2137891..2138160 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP07_RS10545 () | 2138530..2138949 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| PQP07_RS10550 () | 2139337..2139813 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| PQP07_RS10555 () | 2140143..2140538 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| PQP07_RS10560 () | 2141221..2141943 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQP07_RS10565 () | 2142228..2142392 | + | 165 | WP_001134856.1 | membrane protein | - |
| PQP07_RS10570 () | 2142616..2143266 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| PQP07_RS10575 () | 2143285..2143476 | - | 192 | WP_000457836.1 | YebW family protein | - |
| PQP07_RS10580 () | 2143587..2143823 | - | 237 | WP_024131108.1 | YebV family protein | - |
| PQP07_RS10585 () | 2143941..2145380 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP07_RS10590 () | 2145458..2148091 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| PQP07_RS10595 () | 2148060..2149343 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP07_RS10600 () | 2149472..2149969 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.004 |