MGE detailed information
MGE type: Conjugative plasmid MGE length: 101216 bp
Accession: NZ_CP116972 Location: 1..101216 Organism: Escherichia coli strain CUVM3 Replicon: plasmid pCUVM3.2
Accession: NZ_CP116972 Location: 1..101216 Organism: Escherichia coli strain CUVM3 Replicon: plasmid pCUVM3.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP09_RS24965 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| PQP09_RS24970 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| PQP09_RS24975 (1986) | 1986..2255 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PQP09_RS24980 (2255) | 2255..2533 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PQP09_RS24985 (2573) | 2573..3421 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| PQP09_RS24990 (3538) | 3538..3729 | + | 192 | Protein_5 | hypothetical protein | - |
| PQP09_RS24995 (3823) | 3823..4203 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| PQP09_RS25000 (4200) | 4200..4547 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| PQP09_RS25005 (4597) | 4597..6135 | + | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| PQP09_RS25010 (6249) | 6249..6461 | + | 213 | WP_032151770.1 | hypothetical protein | - |
| PQP09_RS25015 (6938) | 6938..7204 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| PQP09_RS25020 (7204) | 7204..7698 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| PQP09_RS25025 (7754) | 7754..8356 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| PQP09_RS25030 (8710) | 8710..10056 | + | 1347 | WP_001132032.1 | protein YagA | - |
| PQP09_RS25035 (10335) | 10335..12215 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| PQP09_RS25040 (12233) | 12233..12580 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| PQP09_RS25045 (12699) | 12699..12905 | + | 207 | Protein_16 | DUF6404 family protein | - |
| PQP09_RS25050 (13088) | 13088..14350 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQP09_RS25055 (14674) | 14674..15819 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQP09_RS25060 (15980) | 15980..16129 | + | 150 | Protein_19 | DUF6404 family protein | - |
| PQP09_RS25065 (16147) | 16147..16737 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| PQP09_RS25070 (16737) | 16737..16991 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| PQP09_RS25075 (17343) | 17343..18344 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| PQP09_RS25080 (18520) | 18520..18864 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| PQP09_RS25085 (19363) | 19363..19617 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| PQP09_RS25090 (19662) | 19662..20588 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| PQP09_RS25095 (21120) | 21120..21533 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| PQP09_RS25100 (21535) | 21535..22314 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| PQP09_RS25105 (22494) | 22494..23138 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PQP09_RS25110 (23225) | 23225..23533 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| PQP09_RS25115 (23947) | 23947..24927 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PQP09_RS25120 (24920) | 24920..25336 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PQP09_RS25125 (25338) | 25338..26612 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| PQP09_RS25130 (26612) | 26612..27049 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP09_RS25135 (27046) | 27046..27294 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PQP09_RS25140 (27712) | 27712..28614 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| PQP09_RS25145 (28611) | 28611..28922 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| PQP09_RS25150 (28999) | 28999..29682 | + | 684 | WP_000086178.1 | DNA methylase | - |
| PQP09_RS25155 (29683) | 29683..29904 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| PQP09_RS25160 (29864) | 29864..30350 | + | 487 | Protein_39 | DUF1380 family protein | - |
| PQP09_RS25165 (30401) | 30401..31171 | + | 771 | WP_181365400.1 | hypothetical protein | - |
| PQP09_RS25170 (31589) | 31589..32014 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| PQP09_RS25175 (32061) | 32061..32483 | + | 423 | WP_001613000.1 | DUF1380 family protein | - |
| PQP09_RS25180 (32480) | 32480..32671 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| PQP09_RS25185 (32862) | 32862..33239 | - | 378 | WP_052987349.1 | hypothetical protein | - |
| PQP09_RS25190 (33441) | 33441..33968 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| PQP09_RS25195 (34026) | 34026..34259 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| PQP09_RS25200 (34318) | 34318..36276 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| PQP09_RS25205 (36331) | 36331..36765 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| PQP09_RS25210 (36762) | 36762..37481 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| PQP09_RS25215 (37611) | 37611..38786 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| PQP09_RS25220 (39233) | 39233..39733 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| PQP09_RS25225 (39873) | 39873..40157 | - | 285 | WP_021013251.1 | hypothetical protein | - |
| PQP09_RS25230 (40462) | 40462..40896 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| PQP09_RS25235 (40988) | 40988..41254 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PQP09_RS25240 (41319) | 41319..42221 | + | 903 | WP_039005633.1 | ISNCY family transposase ISRor2 | VF |
| PQP09_RS25245 (42221) | 42221..42514 | + | 294 | WP_077250487.1 | hypothetical protein | VF |
| PQP09_RS25250 (42545) | 42545..42796 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| PQP09_RS25255 (43377) | 43377..44225 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| PQP09_RS25260 (44311) | 44311..44646 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PQP09_RS25265 (44880) | 44880..45212 | + | 333 | WP_052940647.1 | IncI1-type relaxosome accessory protein NikA | - |
| PQP09_RS25270 (45223) | 45223..47922 | + | 2700 | WP_001474686.1 | hypothetical protein | Relaxase |
| PQP09_RS25275 (47959) | 47959..50250 | - | 2292 | WP_001289271.1 | F-type conjugative transfer protein TrbC | - |
| PQP09_RS25280 (50243) | 50243..51313 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| PQP09_RS25285 (51332) | 51332..52540 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| PQP09_RS25290 (52722) | 52722..54293 | - | 1572 | WP_094083869.1 | IS66 family transposase ISCro1 | Transposase |
| PQP09_RS25295 (54313) | 54313..54660 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PQP09_RS25300 (54660) | 54660..55310 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| - (55432) | 55432..55494 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55432) | 55432..55494 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55432) | 55432..55494 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55432) | 55432..55494 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| PQP09_RS25305 (55544) | 55544..55696 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| PQP09_RS25310 (55768) | 55768..56019 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (56406) | 56406..56457 | - | 52 | NuclAT_1 | - | - |
| - (56406) | 56406..56457 | - | 52 | NuclAT_1 | - | - |
| - (56406) | 56406..56457 | - | 52 | NuclAT_1 | - | - |
| - (56406) | 56406..56457 | - | 52 | NuclAT_1 | - | - |
| PQP09_RS25315 (56943) | 56943..57119 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| PQP09_RS25320 (57511) | 57511..57720 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| PQP09_RS25325 (57792) | 57792..58454 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PQP09_RS25330 (58525) | 58525..60693 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| PQP09_RS25335 (60790) | 60790..61374 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| PQP09_RS25340 (61403) | 61403..62605 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| PQP09_RS25345 (62572) | 62572..63186 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| PQP09_RS25350 (63186) | 63186..66230 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| PQP09_RS25355 (66320) | 66320..67120 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| PQP09_RS25360 (67104) | 67104..67292 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| PQP09_RS25365 (67356) | 67356..67760 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| PQP09_RS25370 (67811) | 67811..68338 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| PQP09_RS25375 (68338) | 68338..69042 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| PQP09_RS25380 (69042) | 69042..70331 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| PQP09_RS25385 (70334) | 70334..71317 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| PQP09_RS25390 (71328) | 71328..72020 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| PQP09_RS25395 (72017) | 72017..72364 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| PQP09_RS25400 (72382) | 72382..76149 | - | 3768 | WP_001141535.1 | DUF5710 domain-containing protein | - |
| PQP09_RS25405 (76239) | 76239..76790 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| PQP09_RS25410 (76805) | 76805..77095 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| PQP09_RS25415 (77092) | 77092..78240 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| PQP09_RS25420 (78237) | 78237..79055 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| PQP09_RS25425 (79052) | 79052..79510 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| PQP09_RS25430 (79905) | 79905..80489 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| PQP09_RS25435 (80549) | 80549..81751 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| PQP09_RS25440 (81837) | 81837..82661 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| PQP09_RS25445 (82812) | 82812..83966 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| PQP09_RS25450 (84657) | 84657..84905 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| PQP09_RS25455 (84902) | 84902..86194 | - | 1293 | WP_032274560.1 | hypothetical protein | VF |
| PQP09_RS25460 (86194) | 86194..86850 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| PQP09_RS25465 (86835) | 86835..87395 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| PQP09_RS25470 (87405) | 87405..88019 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| PQP09_RS25475 (88037) | 88037..89134 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| PQP09_RS25480 (89147) | 89147..90700 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| PQP09_RS25485 (90711) | 90711..91163 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| PQP09_RS25490 (91150) | 91150..92445 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| PQP09_RS25495 (92438) | 92438..94120 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| PQP09_RS25500 (94134) | 94134..94571 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| PQP09_RS25505 (94571) | 94571..95638 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| PQP09_RS25510 (96312) | 96312..96764 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| PQP09_RS25515 (96807) | 96807..97061 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| PQP09_RS25520 (97329) | 97329..97895 | - | 567 | WP_000776428.1 | protein TraD | - |
| PQP09_RS25525 (97909) | 97909..98592 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| PQP09_RS25530 (98846) | 98846..99379 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| PQP09_RS25535 (99821) | 99821..100108 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| PQP09_RS25540 (100026) | 100026..100256 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|