MGE detailed information
MGE type: Genomic_island MGE length: 8364 bp
Accession: NZ_CP116923 Location: 4209783..4218146 Organism: Escherichia coli strain MLI104K1 Replicon: chromosome
Accession: NZ_CP116923 Location: 4209783..4218146 Organism: Escherichia coli strain MLI104K1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL419_RS21395 (4205374) | 4205374..4205712 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| NL419_RS21400 (4205688) | 4205688..4207385 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| NL419_RS21405 (4207422) | 4207422..4207997 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| NL419_RS21415 (4208796) | 4208796..4210334 | + | 1539 | Protein_4095 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NL419_RS21420 (4210699) | 4210699..4212033 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NL419_RS21425 (4212113) | 4212113..4214260 | + | 2148 | WP_255055503.1 | lysine decarboxylase CadA | - |
| NL419_RS21430 (4214319) | 4214319..4215776 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| NL419_RS21435 (4216013) | 4216013..4217530 | + | 1518 | WP_072667412.1 | lysine--tRNA ligase | - |
| NL419_RS21440 (4217649) | 4217649..4217822 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NL419_RS21445 (4217850) | 4217850..4218146 | - | 297 | WP_255055505.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NL419_RS21450 (4218373) | 4218373..4218645 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| NL419_RS21455 (4218657) | 4218657..4218887 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NL419_RS21460 (4219068) | 4219068..4220699 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| NL419_RS21465 (4220696) | 4220696..4221415 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.003 |