MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85083 bp
Accession: NZ_CP116494 Location: 1..85083 Organism: Klebsiella pneumoniae strain XY05-03 Replicon: plasmid unnamed3
Accession: NZ_CP116494 Location: 1..85083 Organism: Klebsiella pneumoniae strain XY05-03 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB23_RS29175 (406) | 406..1503 | + | 1098 | Protein_1 | TonB-dependent receptor | - |
| PIB23_RS29180 (1571) | 1571..2047 | - | 477 | Protein_2 | PAS domain-containing protein | - |
| PIB23_RS29185 (2100) | 2100..2804 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29190 (2870) | 2870..3154 | + | 285 | Protein_4 | PAS domain-containing protein | - |
| PIB23_RS29195 (3218) | 3218..3922 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29200 (3976) | 3976..4299 | - | 324 | Protein_6 | class II aldolase/adducin family protein | - |
| PIB23_RS29205 (4292) | 4292..5544 | - | 1253 | Protein_7 | four-carbon acid sugar kinase family protein | - |
| PIB23_RS29210 (5556) | 5556..6458 | - | 903 | WP_002903955.1 | NAD(P)-dependent oxidoreductase | - |
| PIB23_RS29215 (6720) | 6720..7481 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PIB23_RS29220 (7502) | 7502..8362 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| PIB23_RS29225 (8499) | 8499..8567 | + | 69 | Protein_11 | IS6 family transposase | - |
| PIB23_RS29230 (8603) | 8603..11569 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PIB23_RS29235 (11573) | 11573..12133 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| PIB23_RS29240 (12525) | 12525..13142 | + | 618 | Protein_14 | replication protein | - |
| PIB23_RS29245 (13676) | 13676..13954 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| PIB23_RS29250 (14065) | 14065..14490 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| PIB23_RS29255 (14618) | 14618..14773 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| PIB23_RS29260 (14819) | 14819..15115 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| PIB23_RS29265 (15219) | 15219..16100 | + | 882 | Protein_19 | IS1182 family transposase ISKpn6 | Transposase |
| PIB23_RS29270 (16350) | 16350..17231 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| PIB23_RS29275 (17507) | 17507..18487 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| PIB23_RS29280 (18610) | 18610..19071 | - | 462 | Protein_22 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PIB23_RS29285 (19123) | 19123..19827 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29290 (19892) | 19892..21064 | - | 1173 | Protein_24 | transposase | - |
| PIB23_RS29295 (21139) | 21139..21807 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| PIB23_RS29300 (21843) | 21843..22079 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| PIB23_RS29305 (22076) | 22076..22438 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| PIB23_RS29310 (22456) | 22456..24150 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| PIB23_RS29315 (24202) | 24202..24624 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| PIB23_RS29320 (24660) | 24660..24935 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| PIB23_RS29325 (24949) | 24949..25299 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| PIB23_RS29330 (25371) | 25371..25805 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| PIB23_RS29335 (25884) | 25884..26888 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| PIB23_RS29340 (27168) | 27168..27440 | - | 273 | Protein_34 | transposase | - |
| PIB23_RS29350 (28422) | 28422..29444 | - | 1023 | WP_000361404.1 | helicase UvrD | - |
| PIB23_RS29355 (29429) | 29429..30991 | - | 1563 | WP_004206609.1 | AAA family ATPase | - |
| PIB23_RS29360 (31065) | 31065..31481 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIB23_RS29365 (31478) | 31478..31708 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIB23_RS29370 (31665) | 31665..32126 | + | 462 | WP_014343465.1 | hypothetical protein | - |
| PIB23_RS29375 (32287) | 32287..33231 | + | 945 | WP_011977810.1 | hypothetical protein | - |
| PIB23_RS29380 (33268) | 33268..33660 | + | 393 | WP_011977811.1 | hypothetical protein | - |
| PIB23_RS29385 (33718) | 33718..34239 | + | 522 | WP_013214008.1 | hypothetical protein | - |
| PIB23_RS29390 (34285) | 34285..34488 | + | 204 | WP_011977813.1 | hypothetical protein | - |
| PIB23_RS29395 (34518) | 34518..35522 | + | 1005 | WP_011977814.1 | hypothetical protein | - |
| PIB23_RS29400 (35706) | 35706..36485 | + | 780 | WP_013214009.1 | site-specific integrase | - |
| PIB23_RS29405 (36531) | 36531..36788 | - | 258 | WP_013214010.1 | hypothetical protein | - |
| PIB23_RS29410 (36917) | 36917..37030 | - | 114 | WP_014343462.1 | hypothetical protein | - |
| PIB23_RS29415 (37566) | 37566..38432 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| PIB23_RS29420 (39542) | 39542..40747 | + | 1206 | WP_011977818.1 | AAA family ATPase | - |
| PIB23_RS29425 (40747) | 40747..41721 | + | 975 | WP_011977819.1 | ParB family protein | - |
| PIB23_RS29430 (41803) | 41803..43074 | - | 1272 | WP_013214011.1 | Y-family DNA polymerase | - |
| PIB23_RS29435 (43074) | 43074..43505 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIB23_RS29440 (43912) | 43912..45399 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| PIB23_RS29445 (45648) | 45648..46619 | + | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| PIB23_RS29450 (46622) | 46622..47293 | + | 672 | WP_013214012.1 | plasmid partitioning/stability family protein | - |
| PIB23_RS29455 (47356) | 47356..47586 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| PIB23_RS29460 (47782) | 47782..47951 | + | 170 | Protein_58 | hypothetical protein | - |
| PIB23_RS29465 (48023) | 48023..48724 | + | 702 | WP_001568041.1 | DNA methylase | - |
| PIB23_RS29470 (48724) | 48724..48945 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| PIB23_RS29475 (48955) | 48955..49374 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| PIB23_RS29480 (49428) | 49428..50195 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| PIB23_RS29485 (50876) | 50876..51304 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| PIB23_RS29490 (51347) | 51347..51853 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| PIB23_RS29495 (51896) | 51896..52087 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| PIB23_RS29500 (52275) | 52275..52529 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| PIB23_RS29505 (52564) | 52564..52884 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| PIB23_RS29510 (53564) | 53564..53791 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| PIB23_RS29515 (53883) | 53883..54113 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| PIB23_RS29520 (54165) | 54165..55520 | + | 1356 | WP_014343515.1 | DUF3560 domain-containing protein | - |
| PIB23_RS29525 (55568) | 55568..56131 | + | 564 | WP_014343514.1 | methyltransferase | - |
| PIB23_RS29530 (56964) | 56964..57506 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| PIB23_RS29535 (57555) | 57555..57803 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| PIB23_RS29540 (57873) | 57873..59930 | + | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| PIB23_RS29545 (59975) | 59975..60406 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| PIB23_RS29550 (60403) | 60403..61131 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| PIB23_RS29555 (61128) | 61128..61454 | + | 327 | WP_013023807.1 | hypothetical protein | - |
| PIB23_RS29560 (61510) | 61510..61884 | + | 375 | WP_014343510.1 | hypothetical protein | - |
| PIB23_RS29565 (62054) | 62054..62206 | + | 153 | WP_004150508.1 | DUF5431 family protein | - |
| PIB23_RS29570 (62151) | 62151..62270 | + | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| PIB23_RS29575 (62963) | 62963..63235 | + | 273 | WP_040245921.1 | hypothetical protein | - |
| PIB23_RS29580 (63232) | 63232..63582 | + | 351 | WP_040245917.1 | hypothetical protein | - |
| PIB23_RS29585 (63597) | 63597..63914 | + | 318 | WP_014343505.1 | hypothetical protein | - |
| PIB23_RS29590 (64755) | 64755..65111 | + | 357 | WP_014343501.1 | hypothetical protein | - |
| PIB23_RS29595 (65172) | 65172..65384 | + | 213 | WP_014343500.1 | hypothetical protein | - |
| PIB23_RS29600 (65395) | 65395..65619 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| PIB23_RS29605 (65700) | 65700..66020 | + | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIB23_RS29610 (66010) | 66010..66288 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| PIB23_RS29615 (66292) | 66292..66396 | + | 105 | Protein_89 | transcriptional regulator | - |
| PIB23_RS29620 (67225) | 67225..68046 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| PIB23_RS29625 (68079) | 68079..68408 | + | 330 | WP_013214015.1 | DUF5983 family protein | - |
| PIB23_RS29630 (68441) | 68441..68926 | - | 486 | WP_014343495.1 | hypothetical protein | VF |
| PIB23_RS29635 (69317) | 69317..69733 | + | 417 | WP_014343494.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PIB23_RS29640 (69933) | 69933..70670 | + | 738 | WP_154244330.1 | conjugal transfer protein TrbJ | - |
| PIB23_RS29645 (70785) | 70785..70991 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| PIB23_RS29650 (71053) | 71053..71421 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| PIB23_RS29655 (71435) | 71435..71740 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| PIB23_RS29660 (71760) | 71760..72125 | + | 366 | Protein_98 | type IV conjugative transfer system protein TraE | - |
| PIB23_RS29665 (72180) | 72180..72524 | - | 345 | Protein_99 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29670 (72576) | 72576..73280 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29675 (73305) | 73305..73505 | + | 201 | WP_072354025.1 | hypothetical protein | - |
| PIB23_RS29680 (73525) | 73525..74271 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| PIB23_RS29685 (74326) | 74326..74886 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| PIB23_RS29690 (75018) | 75018..75218 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| PIB23_RS29695 (75604) | 75604..76203 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| PIB23_RS29700 (76265) | 76265..76597 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| - (76798) | 76798..76857 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (76798) | 76798..76857 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (76798) | 76798..76857 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (76798) | 76798..76857 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| PIB23_RS29705 (76902) | 76902..77051 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| PIB23_RS29710 (77335) | 77335..77583 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| PIB23_RS29715 (77828) | 77828..77902 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| PIB23_RS29720 (77895) | 77895..78752 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| PIB23_RS29725 (79691) | 79691..80344 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIB23_RS29730 (80437) | 80437..80694 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIB23_RS29735 (80627) | 80627..81028 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIB23_RS29740 (81277) | 81277..81692 | + | 416 | Protein_114 | IS1 family transposase IS1R | Transposase |
| PIB23_RS29745 (81728) | 81728..82273 | - | 546 | Protein_115 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PIB23_RS29750 (82339) | 82339..83043 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB23_RS29755 (83113) | 83113..83304 | + | 192 | Protein_117 | IS1380 family transposase | - |
| PIB23_RS29760 (83554) | 83554..84429 | + | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|