MGE detailed information
MGE type: Genomic_island MGE length: 24397 bp
Accession: NZ_CP116409 Location: 4710658..4735054 Organism: Escherichia coli strain HH97 Replicon: chromosome
Accession: NZ_CP116409 Location: 4710658..4735054 Organism: Escherichia coli strain HH97 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL329_RS23020 (4706585) | 4706585..4707657 | + | 1073 | Protein_4494 | AraC family transcriptional regulator | - |
| PL329_RS23025 (4707781) | 4707781..4708943 | + | 1163 | Protein_4495 | methionine adenosyltransferase | - |
| PL329_RS23030 (4708989) | 4708989..4709535 | + | 547 | Protein_4496 | propanediol utilization system shell hexameric protein GrpS | - |
| PL329_RS23035 (4710658) | 4710658..4710768 | - | 111 | WP_271711330.1 | HTH-type transcriptional regulator TtgR | VF |
| PL329_RS23040 (4710995) | 4710995..4712159 | - | 1165 | Protein_4498 | efflux RND transporter permease subunit | - |
| PL329_RS23045 (4712259) | 4712259..4712520 | + | 262 | Protein_4499 | transposase | - |
| PL329_RS23050 (4712707) | 4712707..4712832 | - | 126 | WP_271711070.1 | hypothetical protein | - |
| PL329_RS23055 (4712829) | 4712829..4713062 | - | 234 | WP_271711071.1 | AlpA family transcriptional regulator | - |
| PL329_RS23060 (4713086) | 4713086..4713715 | - | 630 | Protein_4502 | hypothetical protein | - |
| PL329_RS23065 (4714064) | 4714064..4714814 | - | 751 | Protein_4503 | inovirus-type Gp2 protein | - |
| PL329_RS23070 (4716278) | 4716278..4717502 | - | 1225 | Protein_4504 | hypothetical protein | - |
| PL329_RS23075 (4717603) | 4717603..4718487 | + | 885 | WP_001116794.1 | YfjP family GTPase | - |
| PL329_RS23080 (4718690) | 4718690..4719370 | + | 681 | WP_271711072.1 | WYL domain-containing protein | - |
| PL329_RS23085 (4719521) | 4719521..4720198 | + | 678 | WP_001097565.1 | hypothetical protein | - |
| PL329_RS23090 (4720204) | 4720204..4720437 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| PL329_RS23095 (4720527) | 4720527..4721345 | + | 819 | WP_271711073.1 | DUF932 domain-containing protein | - |
| PL329_RS23100 (4721611) | 4721611..4722090 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| PL329_RS23105 (4722105) | 4722105..4722581 | + | 477 | WP_001186194.1 | RadC family protein | - |
| PL329_RS23110 (4722668) | 4722668..4722889 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| PL329_RS23115 (4722969) | 4722969..4723337 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PL329_RS23120 (4723426) | 4723426..4723803 | + | 378 | WP_000854811.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| PL329_RS23125 (4723800) | 4723800..4723949 | + | 150 | Protein_4515 | DUF5983 family protein | - |
| PL329_RS23130 (4724025) | 4724025..4724222 | + | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| PL329_RS23135 (4724307) | 4724307..4724867 | + | 561 | Protein_4517 | DUF4942 domain-containing protein | - |
| PL329_RS23140 (4725703) | 4725703..4727241 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PL329_RS23145 (4727607) | 4727607..4728941 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PL329_RS23150 (4729021) | 4729021..4731168 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PL329_RS23155 (4731227) | 4731227..4732684 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| PL329_RS23160 (4732921) | 4732921..4734438 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| PL329_RS23165 (4734557) | 4734557..4734730 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PL329_RS23170 (4734758) | 4734758..4735054 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PL329_RS23175 (4735281) | 4735281..4735553 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| PL329_RS23180 (4735565) | 4735565..4735795 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PL329_RS23185 (4735976) | 4735976..4737607 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PL329_RS23190 (4737604) | 4737604..4738323 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|