MGE detailed information
MGE type: Genomic_island MGE length: 72371 bp
Accession: NZ_CP116241 Location: 2629727..2702097 Organism: Escherichia coli strain 7.1994/NIST0056 Replicon: chromosome
Accession: NZ_CP116241 Location: 2629727..2702097 Organism: Escherichia coli strain 7.1994/NIST0056 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PH192_RS12810 (2625098) | 2625098..2626282 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| PH192_RS12815 (2626432) | 2626432..2627442 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| PH192_RS12820 (2627538) | 2627538..2629664 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| PH192_RS12825 (2629727) | 2629727..2631004 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| PH192_RS12830 (2631004) | 2631004..2632434 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| PH192_RS12835 (2632629) | 2632629..2634023 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| PH192_RS12840 (2634601) | 2634601..2634888 | - | 288 | Protein_2517 | integrase core domain-containing protein | - |
| PH192_RS12845 (2634877) | 2634877..2635238 | - | 362 | Protein_2518 | IS1 family transposase IS1A | Transposase |
| PH192_RS12850 (2635288) | 2635288..2636322 | + | 1035 | WP_032307461.1 | tetratricopeptide repeat family protein | - |
| PH192_RS12855 (2636466) | 2636466..2638139 | - | 1674 | WP_058128117.1 | sulfatase-like hydrolase/transferase | - |
| PH192_RS12860 (2638192) | 2638192..2638389 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| PH192_RS12865 (2638529) | 2638529..2638795 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| PH192_RS12870 (2638792) | 2638792..2640363 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| PH192_RS12875 (2640410) | 2640410..2641489 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| PH192_RS12880 (2641538) | 2641538..2642434 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| PH192_RS12885 (2642854) | 2642854..2643591 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| PH192_RS12890 (2643821) | 2643821..2643999 | + | 179 | Protein_2527 | integrase | - |
| PH192_RS12895 (2644222) | 2644222..2645118 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| PH192_RS12900 (2645118) | 2645118..2646740 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| PH192_RS12905 (2646749) | 2646749..2647891 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| PH192_RS12910 (2647888) | 2647888..2649522 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| PH192_RS12915 (2649586) | 2649586..2652999 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| PH192_RS12920 (2653607) | 2653607..2654121 | + | 515 | Protein_2533 | ISL3 family transposase ISEc38 | Transposase |
| PH192_RS12925 (2654421) | 2654421..2654687 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| PH192_RS12930 (2655154) | 2655154..2656236 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| PH192_RS12935 (2656239) | 2656239..2657183 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| PH192_RS12940 (2657180) | 2657180..2658160 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| PH192_RS12945 (2658328) | 2658328..2659489 | + | 1162 | Protein_2538 | IS3 family transposase IS3 | Transposase |
| PH192_RS12950 (2659622) | 2659622..2660482 | - | 861 | Protein_2539 | VENN motif pre-toxin domain-containing protein | - |
| PH192_RS12955 (2661189) | 2661189..2662409 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| PH192_RS12960 (2662420) | 2662420..2663331 | + | 912 | WP_001564269.1 | carbamate kinase | - |
| PH192_RS12965 (2663416) | 2663416..2664420 | + | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| PH192_RS12970 (2664468) | 2664468..2665871 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| PH192_RS12975 (2665952) | 2665952..2666431 | + | 480 | WP_024191448.1 | ArgR family transcriptional regulator | - |
| PH192_RS12980 (2666505) | 2666505..2666666 | + | 162 | WP_088459633.1 | pyrBI operon leader peptide | - |
| PH192_RS12985 (2666669) | 2666669..2666926 | + | 258 | WP_029402540.1 | hypothetical protein | - |
| PH192_RS12990 (2667078) | 2667078..2667437 | - | 360 | WP_029402539.1 | hypothetical protein | VF |
| PH192_RS12995 (2667450) | 2667450..2669216 | - | 1767 | WP_029402537.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| PH192_RS13000 (2669580) | 2669580..2669813 | - | 234 | WP_029402536.1 | hypothetical protein | - |
| PH192_RS13005 (2669910) | 2669910..2670533 | - | 624 | WP_029402534.1 | hypothetical protein | - |
| PH192_RS13010 (2670622) | 2670622..2671134 | - | 513 | WP_058128118.1 | hypothetical protein | - |
| PH192_RS13015 (2671403) | 2671403..2671639 | - | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
| PH192_RS13020 (2671708) | 2671708..2672280 | - | 573 | WP_202852180.1 | hypothetical protein | - |
| PH192_RS13025 (2672527) | 2672527..2673093 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| PH192_RS13030 (2674690) | 2674690..2676294 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| PH192_RS13035 (2676728) | 2676728..2676934 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| PH192_RS13040 (2676946) | 2676946..2677206 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| PH192_RS13045 (2677230) | 2677230..2677385 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| PH192_RS13050 (2677479) | 2677479..2678210 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| PH192_RS13055 (2679961) | 2679961..2680770 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| PH192_RS13060 (2680767) | 2680767..2681699 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| PH192_RS13065 (2681806) | 2681806..2682690 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| PH192_RS13070 (2682809) | 2682809..2683486 | + | 678 | WP_120136232.1 | hypothetical protein | - |
| PH192_RS13075 (2683492) | 2683492..2683725 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| PH192_RS13080 (2683854) | 2683854..2684536 | + | 683 | Protein_2565 | IS66-like element accessory protein TnpA | - |
| PH192_RS13085 (2684536) | 2684536..2684883 | + | 348 | WP_211140355.1 | IS66 family transposase ISCro1 | Transposase |
| PH192_RS13090 (2685071) | 2685071..2685610 | + | 540 | WP_271356484.1 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| PH192_RS13095 (2685510) | 2685510..2686346 | + | 837 | Protein_2568 | IS66 family transposase ISCro1 | Transposase |
| PH192_RS13100 (2686368) | 2686368..2686475 | + | 108 | WP_032282290.1 | IS66 family transposase ISCro1 | Transposase |
| PH192_RS13105 (2686528) | 2686528..2687346 | + | 819 | WP_001175148.1 | DUF932 domain-containing protein | - |
| PH192_RS13110 (2687428) | 2687428..2687907 | + | 480 | WP_120136233.1 | antirestriction protein | - |
| PH192_RS13115 (2687923) | 2687923..2688399 | + | 477 | WP_001366855.1 | RadC family protein | - |
| PH192_RS13120 (2688462) | 2688462..2688683 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| PH192_RS13125 (2688763) | 2688763..2689137 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PH192_RS13130 (2689184) | 2689184..2689561 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| PH192_RS13135 (2689558) | 2689558..2690046 | + | 489 | WP_000761677.1 | DUF5983 family protein | - |
| PH192_RS13140 (2690058) | 2690058..2690255 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| PH192_RS13145 (2690340) | 2690340..2691206 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| PH192_RS13150 (2691278) | 2691278..2691541 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PH192_RS13155 (2691538) | 2691538..2691864 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PH192_RS13160 (2692747) | 2692747..2694285 | + | 1539 | WP_001187200.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PH192_RS13165 (2694650) | 2694650..2695984 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PH192_RS13170 (2696064) | 2696064..2698211 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PH192_RS13175 (2698270) | 2698270..2699727 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| PH192_RS13180 (2699964) | 2699964..2701481 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| PH192_RS13185 (2701600) | 2701600..2701773 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PH192_RS13190 (2701801) | 2701801..2702097 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PH192_RS13195 (2702324) | 2702324..2702596 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PH192_RS13200 (2702608) | 2702608..2702838 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PH192_RS13205 (2703019) | 2703019..2704650 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| PH192_RS13210 (2704647) | 2704647..2705366 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|