MGE detailed information
MGE type: Genomic_island MGE length: 24720 bp
Accession: NZ_CP116197 Location: 4376382..4401101 Organism: Escherichia coli strain DETEC-C31 Replicon: chromosome
Accession: NZ_CP116197 Location: 4376382..4401101 Organism: Escherichia coli strain DETEC-C31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB97_RS20900 (4371753) | 4371753..4372937 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| PIB97_RS20905 (4373087) | 4373087..4374097 | + | 1011 | WP_000053333.1 | substrate-binding domain-containing protein | - |
| PIB97_RS20910 (4374193) | 4374193..4376319 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| PIB97_RS20915 (4376382) | 4376382..4377659 | + | 1278 | WP_001083367.1 | MFS transporter | - |
| PIB97_RS20920 (4377659) | 4377659..4379089 | + | 1431 | WP_000813679.1 | glycoside hydrolase family 32 protein | - |
| PIB97_RS20925 (4379284) | 4379284..4380678 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| PIB97_RS20930 (4380752) | 4380752..4380928 | + | 177 | WP_162843692.1 | hypothetical protein | - |
| PIB97_RS20940 (4381920) | 4381920..4382624 | - | 705 | WP_250908626.1 | hypothetical protein | - |
| PIB97_RS20945 (4382809) | 4382809..4383693 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| PIB97_RS20950 (4383896) | 4383896..4384576 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIB97_RS20955 (4384724) | 4384724..4385401 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| PIB97_RS20960 (4385431) | 4385431..4385640 | + | 210 | WP_174402685.1 | DUF905 family protein | - |
| PIB97_RS20965 (4385730) | 4385730..4386548 | + | 819 | WP_001175175.1 | DUF932 domain-containing protein | - |
| PIB97_RS20970 (4386640) | 4386640..4387125 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| PIB97_RS20975 (4387140) | 4387140..4387616 | + | 477 | WP_001384029.1 | RadC family protein | - |
| PIB97_RS20980 (4387703) | 4387703..4387924 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| PIB97_RS20985 (4388004) | 4388004..4388372 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIB97_RS20990 (4388462) | 4388462..4388839 | + | 378 | WP_039023548.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIB97_RS20995 (4388836) | 4388836..4388985 | + | 150 | Protein_4109 | DUF5983 family protein | - |
| PIB97_RS21000 (4389061) | 4389061..4389258 | + | 198 | WP_088172489.1 | DUF957 domain-containing protein | - |
| PIB97_RS21005 (4389343) | 4389343..4390209 | + | 867 | WP_039023551.1 | DUF4942 domain-containing protein | - |
| PIB97_RS21010 (4390281) | 4390281..4390544 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PIB97_RS21015 (4390541) | 4390541..4390867 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIB97_RS21020 (4391750) | 4391750..4393288 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIB97_RS21025 (4393654) | 4393654..4394988 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIB97_RS21030 (4395068) | 4395068..4397215 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PIB97_RS21035 (4397274) | 4397274..4398731 | + | 1458 | WP_021557456.1 | dipeptide/tripeptide permease DtpC | - |
| PIB97_RS21040 (4398968) | 4398968..4400485 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| PIB97_RS21045 (4400604) | 4400604..4400777 | - | 174 | WP_001672275.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIB97_RS21050 (4400805) | 4400805..4401101 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIB97_RS21055 (4401328) | 4401328..4401600 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIB97_RS21060 (4401612) | 4401612..4401842 | - | 231 | WP_021557455.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIB97_RS21065 (4402023) | 4402023..4403654 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PIB97_RS21070 (4403651) | 4403651..4404370 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|