MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108072 bp
Accession: NZ_CP116192 Location: 1..108072 Organism: Escherichia coli strain DETEC-E1070 Replicon: plasmid pDETEC3
Accession: NZ_CP116192 Location: 1..108072 Organism: Escherichia coli strain DETEC-E1070 Replicon: plasmid pDETEC3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC72_RS24175 (PIC72_24175) | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| PIC72_RS24180 (PIC72_24180) | 1221..1961 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| PIC72_RS24185 (PIC72_24185) | 2082..2270 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| PIC72_RS24190 (PIC72_24190) | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| PIC72_RS24195 (PIC72_24195) | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| PIC72_RS24200 (PIC72_24200) | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| PIC72_RS24205 (PIC72_24205) | 5462..5886 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| PIC72_RS24210 (PIC72_24210) | 6168..8138 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| PIC72_RS24215 (PIC72_24215) | 8145..8936 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| PIC72_RS24220 (PIC72_24220) | 8999..9607 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| PIC72_RS24225 (PIC72_24225) | 9675..10457 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| PIC72_RS24230 (PIC72_24230) | 10454..11476 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| PIC72_RS24235 (PIC72_24235) | 11562..12507 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| PIC72_RS24240 (PIC72_24240) | 12556..12903 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| PIC72_RS24245 (PIC72_24245) | 12900..13304 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| PIC72_RS24250 (PIC72_24250) | 13384..13722 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| PIC72_RS24255 (PIC72_24255) | 13806..15314 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| PIC72_RS24260 (PIC72_24260) | 15987..16726 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| PIC72_RS24265 (PIC72_24265) | 16828..17088 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| PIC72_RS24270 (PIC72_24270) | 17085..17594 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| PIC72_RS24275 (PIC72_24275) | 17614..17961 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| PIC72_RS24280 (PIC72_24280) | 18090..18425 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| PIC72_RS24285 (PIC72_24285) | 19877..20502 | + | 626 | Protein_22 | replication initiation protein | - |
| PIC72_RS24290 (PIC72_24290) | 20876..21751 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| PIC72_RS24295 (PIC72_24295) | 21759..22535 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| PIC72_RS24300 (PIC72_24300) | 22704..24965 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| PIC72_RS24305 (PIC72_24305) | 25034..26209 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| PIC72_RS24310 (PIC72_24310) | 26732..27037 | - | 306 | Protein_27 | IS91 family transposase ISSbo1 | Transposase |
| PIC72_RS24315 (PIC72_24315) | 27063..27802 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| PIC72_RS24320 (PIC72_24320) | 28475..28789 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| PIC72_RS24325 (PIC72_24325) | 28790..28963 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| PIC72_RS24330 (PIC72_24330) | 29113..29746 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| PIC72_RS24335 (PIC72_24335) | 29868..30353 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| PIC72_RS24340 (PIC72_24340) | 30378..30863 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| PIC72_RS24345 (PIC72_24345) | 30850..31545 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PIC72_RS24350 (PIC72_24350) | 31550..32680 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| PIC72_RS24355 (PIC72_24355) | 32670..33953 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| PIC72_RS24360 (PIC72_24360) | 33956..35335 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| PIC72_RS24365 (PIC72_24365) | 35439..35966 | - | 528 | WP_000178050.1 | iron transporter | - |
| PIC72_RS24370 (PIC72_24370) | 36007..37893 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| PIC72_RS24375 (PIC72_24375) | 38240..39001 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| PIC72_RS24380 (PIC72_24380) | 39238..39744 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| PIC72_RS24385 (PIC72_24385) | 39734..39904 | - | 171 | Protein_42 | DsbA family protein | - |
| PIC72_RS24390 (PIC72_24390) | 40042..40155 | - | 114 | Protein_43 | IS6 family transposase IS15DI | Transposase |
| PIC72_RS24395 (PIC72_24395) | 40355..40962 | + | 608 | Protein_44 | IS1 family transposase | - |
| PIC72_RS24400 (PIC72_24400) | 41016..41720 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24405 (PIC72_24405) | 41785..42048 | + | 264 | Protein_46 | IS6 family transposase IS6100 | Transposase |
| PIC72_RS24410 (PIC72_24410) | 42541..43125 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| PIC72_RS24415 (PIC72_24415) | 43125..44363 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| PIC72_RS24420 (PIC72_24420) | 44360..45265 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| PIC72_RS24425 (PIC72_24425) | 45387..46091 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24430 (PIC72_24430) | 46261..46542 | - | 282 | Protein_51 | transposase zinc-binding domain-containing protein | - |
| PIC72_RS24435 (PIC72_24435) | 46689..47549 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIC72_RS24440 (PIC72_24440) | 47732..48070 | - | 339 | Protein_53 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PIC72_RS24445 (PIC72_24445) | 48134..48838 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24450 (PIC72_24450) | 49133..52099 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| PIC72_RS24455 (PIC72_24455) | 52102..52662 | - | 561 | WP_021532377.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PIC72_RS24460 (PIC72_24460) | 52702..53406 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24465 (PIC72_24465) | 53471..53566 | + | 96 | Protein_58 | IS1 family transposase | - |
| PIC72_RS24470 (PIC72_24470) | 53581..54744 | + | 1164 | Protein_59 | IS4 family transposase IS10R | Transposase |
| PIC72_RS24475 (PIC72_24475) | 54754..55170 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| PIC72_RS24480 (PIC72_24480) | 55258..55851 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| PIC72_RS24485 (PIC72_24485) | 55964..57169 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| PIC72_RS24490 (PIC72_24490) | 57251..57874 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| PIC72_RS24495 (PIC72_24495) | 57852..57944 | - | 93 | Protein_64 | transcriptional regulator | - |
| PIC72_RS24500 (PIC72_24500) | 57995..58692 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| PIC72_RS24505 (PIC72_24505) | 58742..59215 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| PIC72_RS24510 (PIC72_24510) | 59373..60386 | + | 1014 | WP_000845046.1 | IS91 family transposase ISAzo26 | Transposase |
| PIC72_RS24515 (PIC72_24515) | 60589..60939 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| PIC72_RS24520 (PIC72_24520) | 61149..61853 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24525 (PIC72_24525) | 61903..62622 | + | 720 | Protein_70 | helicase RepA family protein | - |
| PIC72_RS24530 (PIC72_24530) | 62609..63460 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| PIC72_RS24535 (PIC72_24535) | 63768..64583 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| PIC72_RS24540 (PIC72_24540) | 64644..65447 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PIC72_RS24545 (PIC72_24545) | 65447..66283 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PIC72_RS24550 (PIC72_24550) | 66344..67048 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC72_RS24555 (PIC72_24555) | 67113..68363 | - | 1251 | Protein_76 | transposase | - |
| PIC72_RS24560 (PIC72_24560) | 68438..69106 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| PIC72_RS24565 (PIC72_24565) | 69142..69378 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| PIC72_RS24570 (PIC72_24570) | 69375..69737 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| PIC72_RS24575 (PIC72_24575) | 69755..71449 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| PIC72_RS24580 (PIC72_24580) | 71501..71923 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| PIC72_RS24585 (PIC72_24585) | 71959..72234 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| PIC72_RS24590 (PIC72_24590) | 72248..72598 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| PIC72_RS24595 (PIC72_24595) | 72670..73104 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| PIC72_RS24605 (PIC72_24605) | 74157..74558 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIC72_RS24610 (PIC72_24610) | 74491..74748 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIC72_RS24615 (PIC72_24615) | 74841..75494 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIC72_RS24620 (PIC72_24620) | 75957..76496 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| PIC72_RS24625 (PIC72_24625) | 76522..76728 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| PIC72_RS24630 (PIC72_24630) | 76969..77238 | - | 270 | WP_071977877.1 | hypothetical protein | - |
| PIC72_RS24635 (PIC72_24635) | 77139..77372 | - | 234 | WP_271291450.1 | hypothetical protein | - |
| PIC72_RS24640 (PIC72_24640) | 77372..77935 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| PIC72_RS24645 (PIC72_24645) | 77983..79343 | - | 1361 | Protein_94 | DUF3560 domain-containing protein | - |
| PIC72_RS24650 (PIC72_24650) | 79395..79625 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| PIC72_RS24655 (PIC72_24655) | 80660..80851 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| PIC72_RS24660 (PIC72_24660) | 80848..81270 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| PIC72_RS24665 (PIC72_24665) | 81317..81742 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| PIC72_RS24670 (PIC72_24670) | 82159..82935 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| PIC72_RS24675 (PIC72_24675) | 82986..83504 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| PIC72_RS24680 (PIC72_24680) | 83434..83655 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| PIC72_RS24685 (PIC72_24685) | 83656..84339 | - | 684 | WP_000086185.1 | DNA methylase | - |
| PIC72_RS24690 (PIC72_24690) | 84416..84727 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| PIC72_RS24695 (PIC72_24695) | 84724..85626 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| PIC72_RS24700 (PIC72_24700) | 86493..87464 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PIC72_RS24705 (PIC72_24705) | 87464..88630 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| PIC72_RS24710 (PIC72_24710) | 89218..89973 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| PIC72_RS24715 (PIC72_24715) | 90747..91553 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| PIC72_RS24720 (PIC72_24720) | 91554..91859 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PIC72_RS24725 (PIC72_24725) | 91861..92079 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PIC72_RS24730 (PIC72_24730) | 92646..93158 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| PIC72_RS24735 (PIC72_24735) | 93192..94325 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| PIC72_RS24740 (PIC72_24740) | 94492..95265 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| PIC72_RS24745 (PIC72_24745) | 95278..95778 | - | 501 | WP_001773886.1 | HEPN family nuclease | - |
| PIC72_RS24750 (PIC72_24750) | 96043..96273 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIC72_RS24755 (PIC72_24755) | 96270..96686 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIC72_RS24760 (PIC72_24760) | 96731..100525 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| PIC72_RS24765 (PIC72_24765) | 100906..101136 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIC72_RS24770 (PIC72_24770) | 101133..101549 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIC72_RS24775 (PIC72_24775) | 101624..103189 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| PIC72_RS24780 (PIC72_24780) | 103174..104196 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| PIC72_RS24790 (PIC72_24790) | 105450..106147 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| PIC72_RS24795 (PIC72_24795) | 106327..106840 | - | 514 | Protein_124 | DUF4113 domain-containing protein | - |
| PIC72_RS24800 (PIC72_24800) | 106901..107005 | - | 105 | Protein_125 | AAA family ATPase | - |
| PIC72_RS24805 (PIC72_24805) | 107007..107330 | - | 324 | Protein_126 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|