NZ_CP1161891..154454

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 154454 bp
Accession: NZ_CP116189        Location: 1..154454         Organism: Escherichia coli strain DETEC-E223       Replicon: plasmid pDETEC11


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PIC88_RS23920 (283) 283..477 + 195 Protein_0 IS200-IS605 family transposase IS200C Transposase
PIC88_RS23925 (606) 606..1547 - 942 WP_000974762.1 hypothetical protein -
PIC88_RS23930 (1782) 1782..3170 - 1389 Protein_2 ISNCY family transposase ISKpn21 Transposase
PIC88_RS23935 (3480) 3480..3629 - 150 Protein_3 IS3 family transposase IS2 Transposase
PIC88_RS23940 (3807) 3807..5000 - 1194 WP_000450494.1 GTP-binding protein -
PIC88_RS23950 (8078) 8078..8371 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
PIC88_RS23955 (8429) 8429..8628 - 200 Protein_7 lysis protein -
PIC88_RS23960 (9182) 9182..10209 + 1028 Protein_8 integrase core domain-containing protein -
PIC88_RS23965 (11520) 11520..12635 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
PIC88_RS23970 (12775) 12775..16434 + 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
PIC88_RS23975 (16538) 16538..17767 + 1230 WP_000933675.1 Enterochelin esterase VF
PIC88_RS23980 (17852) 17852..18808 + 957 WP_064055648.1 hypothetical protein VF
PIC88_RS23985 (18853) 18853..21030 - 2178 WP_001222186.1 Ferric enterobactin receptor VF
PIC88_RS23990 (21265) 21265..21962 + 698 WP_095033700.1 IS1 family transposase IS1R Transposase
PIC88_RS23995 (21979) 21979..22176 - 198 Protein_15 colicin V -
PIC88_RS24000 (22154) 22154..22390 - 237 WP_014640552.1 colicin V immunity protein -
PIC88_RS24005 (22932) 22932..23135 - 204 Protein_17 hypothetical protein -
PIC88_RS24010 (23308) 23308..23475 + 168 Protein_18 colicin-B -
PIC88_RS24015 (23493) 23493..24020 - 528 WP_000203272.1 colicin B immunity protein -
PIC88_RS24020 (24264) 24264..25079 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
PIC88_RS24025 (25129) 25129..25482 - 354 WP_000864812.1 colicin M immunity protein -
PIC88_RS24030 (25660) 25660..26451 - 792 WP_000016493.1 site-specific integrase -
PIC88_RS24035 (26448) 26448..27137 - 690 WP_000796228.1 hypothetical protein -
PIC88_RS24040 (27181) 27181..27531 - 351 WP_000493379.1 hypothetical protein -
PIC88_RS24045 (28063) 28063..31878 - 3816 WP_271293256.1 hypothetical protein -
PIC88_RS24050 (32104) 32104..32289 + 186 Protein_26 hypothetical protein -
PIC88_RS24055 (32307) 32307..32654 - 348 WP_000142450.1 DUF6404 family protein -
PIC88_RS24060 (32956) 32956..33438 - 483 WP_001311056.1 hypothetical protein -
PIC88_RS24065 (33555) 33555..34403 - 849 WP_023154360.1 3'-5' exonuclease -
PIC88_RS24070 (34449) 34449..34727 - 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB -
PIC88_RS24075 (34837) 34837..36588 - 1752 Protein_31 Tn3 family transposase TnpA_TnAs1 Transposase
PIC88_RS24080 (36592) 36592..36984 + 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
PIC88_RS24085 (37122) 37122..38006 + 885 WP_000058717.1 EamA family transporter -
PIC88_RS24090 (38038) 38038..39237 - 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
PIC88_RS24095 (39343) 39343..39993 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
PIC88_RS24100 (40025) 40025..40267 - 243 WP_000844627.1 transposase -
PIC88_RS24105 (40325) 40325..41839 - 1515 Protein_37 Tn3 family transposase TnpA_TnAs1 Transposase
PIC88_RS24110 (41905) 41905..42611 + 707 Protein_38 IS6 family transposase IS15DI Transposase
PIC88_RS24115 (42617) 42617..43363 + 747 WP_071448054.1 winged helix-turn-helix domain-containing protein -
PIC88_RS24120 (43363) 43363..43881 + 519 WP_014839979.1 FidL-like protein -
PIC88_RS24125 (43886) 43886..44302 - 417 WP_014839980.1 Glutathione transferase FosA ARG
PIC88_RS24130 (44562) 44562..44879 - 318 Protein_42 IS5 family transposase IS903B Transposase
PIC88_RS24135 (44914) 44914..45789 - 876 WP_001617865.1 Beta-lactamase CTX-M-97 ARG
PIC88_RS24140 (46092) 46092..46794 - 703 Protein_44 IS6 family transposase IS15DI Transposase
PIC88_RS24145 (46908) 46908..47684 + 777 WP_001199192.1 SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
PIC88_RS24150 (47913) 47913..48938 + 1026 WP_000742814.1 Hygromycin-B 4-O-kinase ARG
PIC88_RS24155 (49013) 49013..49252 + 240 Protein_47 AAC(3) family N-acetyltransferase -
PIC88_RS24160 (49360) 49360..50112 - 753 WP_000602738.1 IS6 family transposase ISRle7 Transposase
PIC88_RS24165 (50174) 50174..51697 + 1524 Protein_49 Tn3 family transposase TnpA_ISRsp12 Transposase
PIC88_RS24170 (51757) 51757..51885 + 129 WP_032073144.1 hypothetical protein -
PIC88_RS24175 (51923) 51923..52408 + 486 WP_006581703.1 hypothetical protein -
PIC88_RS24185 (53785) 53785..54600 + 816 WP_001043260.1 Dihydropteroate synthase ARG
PIC88_RS24190 (54687) 54687..54929 + 243 Protein_54 phosphoglucosamine mutase -
PIC88_RS24195 (55165) 55165..56658 - 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
PIC88_RS24200 (56770) 56770..57075 - 306 WP_001255015.1 HTH-type transcriptional regulator HdfR VF
PIC88_RS24205 (57103) 57103..58317 - 1215 WP_000214122.1 Bicyclomycin resistance protein ARG
PIC88_RS24210 (58534) 58534..59418 - 885 WP_001447541.1 DUF3363 domain-containing protein -
PIC88_RS24215 (59449) 59449..60279 - 831 Protein_59 IS91 family transposase ISVsa3 Transposase
PIC88_RS24220 (60343) 60343..61047 + 705 WP_001067784.1 IS6 family transposase IS1006 Transposase
PIC88_RS24225 (61132) 61132..61608 - 477 WP_223171565.1 hypothetical protein -
PIC88_RS24230 (61542) 61542..64493 - 2952 WP_015344976.1 Tn3 family transposase TnpA_TnAs3 Transposase
PIC88_RS24235 (64496) 64496..65056 - 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
PIC88_RS24240 (65182) 65182..65343 - 162 WP_050858800.1 DUF3330 domain-containing protein -
PIC88_RS24245 (65402) 65402..66106 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
PIC88_RS24250 (66160) 66160..66549 + 390 Protein_66 macrolide-binding transcriptional repressor MphR(A) -
PIC88_RS24255 (67042) 67042..67806 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
PIC88_RS24260 (67935) 67935..68639 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
PIC88_RS24265 (68703) 68703..70334 + 1632 Protein_69 Multifunctional conjugation protein TraI Relaxase
PIC88_RS24270 (70354) 70354..71100 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
PIC88_RS24275 (71159) 71159..72019 + 861 WP_000704514.1 Quorum-quenching protein AidA VF
PIC88_RS24280 (72122) 72122..72682 + 561 WP_000139315.1 fertility inhibition protein FinO -
PIC88_RS24285 (72818) 72818..73030 + 213 WP_001299730.1 ANR family transcriptional regulator -
PIC88_RS24290 (73276) 73276..73350 + 75 Protein_74 endonuclease -
- (73606) 73606..73667 - 62 NuclAT_1 - Antitoxin Detail
- (73606) 73606..73667 - 62 NuclAT_1 - Antitoxin Detail
- (73606) 73606..73667 - 62 NuclAT_1 - Antitoxin Detail
- (73606) 73606..73667 - 62 NuclAT_1 - Antitoxin Detail
PIC88_RS24295 (73711) 73711..73860 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
PIC88_RS24300 (74144) 74144..74401 + 258 WP_000083845.1 replication regulatory protein RepA -
PIC88_RS24305 (74418) 74418..74669 - 252 WP_223195197.1 replication protein RepA -
PIC88_RS24310 (74660) 74660..74707 + 48 WP_229471593.1 hypothetical protein -
PIC88_RS24315 (74700) 74700..75182 + 483 WP_001273588.1 hypothetical protein -
PIC88_RS24320 (75175) 75175..76032 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
PIC88_RS24325 (76308) 76308..77054 - 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
PIC88_RS24330 (77069) 77069..78610 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
PIC88_RS24335 (79558) 79558..80211 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
PIC88_RS24340 (80304) 80304..80561 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
PIC88_RS24345 (80494) 80494..80895 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
PIC88_RS24350 (81180) 81180..82490 + 1311 WP_001262765.1 DUF262 domain-containing protein -
PIC88_RS24355 (82519) 82519..82617 + 99 Protein_87 IS1 family transposase -
PIC88_RS24360 (82767) 82767..83627 - 861 WP_000027057.1 Beta-lactamase TEM ARG
PIC88_RS24365 (83763) 83763..84467 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
PIC88_RS24370 (84521) 84521..84721 - 201 Protein_90 DUF3330 domain-containing protein -
PIC88_RS24375 (84924) 84924..85937 - 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
PIC88_RS24380 (86082) 86082..86579 + 498 WP_001083725.1 IS1595 family transposase ISSsu9 ARG
PIC88_RS24385 (86691) 86691..86981 + 291 WP_001336345.1 DUF1010 domain-containing protein -
PIC88_RS24390 (86987) 86987..87825 + 839 Protein_94 Streptomycin 3''-adenylyltransferase ARG
PIC88_RS24395 (87942) 87942..88289 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
PIC88_RS24400 (88283) 88283..88615 + 333 Protein_96 IS6 family transposase IS15 Transposase
PIC88_RS24405 (88672) 88672..89376 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
PIC88_RS24410 (89428) 89428..91629 - 2202 Protein_98 conjugal transfer mating pair stabilization protein TraG -
PIC88_RS24415 (91626) 91626..92999 - 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
PIC88_RS24420 (92999) 92999..93379 - 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
PIC88_RS24425 (93366) 93366..93707 - 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
PIC88_RS24430 (93637) 93637..94182 - 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
PIC88_RS24435 (94169) 94169..94453 - 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
PIC88_RS24440 (94534) 94534..94848 + 315 WP_001324103.1 hypothetical protein -
PIC88_RS24445 (94850) 94850..95197 - 348 WP_001287910.1 conjugal transfer protein TrbA -
PIC88_RS24450 (95213) 95213..95956 - 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
PIC88_RS24455 (95949) 95949..96206 - 258 WP_000864318.1 conjugal transfer protein TrbE -
PIC88_RS24460 (96233) 96233..98041 - 1809 WP_000821841.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
PIC88_RS24465 (98038) 98038..98676 - 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
PIC88_RS24470 (98685) 98685..99677 - 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
PIC88_RS24475 (99674) 99674..100306 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
PIC88_RS24480 (100303) 100303..100689 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
PIC88_RS24485 (100686) 100686..103313 - 2628 WP_001064245.1 type IV secretion system protein TraC -
PIC88_RS24490 (103473) 103473..103694 - 222 WP_001278689.1 conjugal transfer protein TraR -
PIC88_RS24495 (103829) 103829..104344 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
PIC88_RS24500 (104341) 104341..104592 - 252 WP_001038342.1 conjugal transfer protein TrbG -
PIC88_RS24505 (104604) 104604..104801 - 198 WP_001324648.1 conjugal transfer protein TrbD -
PIC88_RS24510 (104788) 104788..105378 - 591 WP_001376242.1 conjugal transfer pilus-stabilizing protein TraP -
PIC88_RS24515 (105368) 105368..106795 - 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
PIC88_RS24520 (106795) 106795..107523 - 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
PIC88_RS24525 (107510) 107510..108076 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
PIC88_RS24530 (108098) 108098..108409 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
PIC88_RS24535 (108424) 108424..108789 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
PIC88_RS24540 (108822) 108822..109223 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
PIC88_RS24545 (109316) 109316..110005 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
PIC88_RS24550 (110192) 110192..110575 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
PIC88_RS24555 (110896) 110896..111498 + 603 WP_000243712.1 hypothetical protein VF
PIC88_RS24560 (111795) 111795..112616 - 822 WP_001234426.1 DUF932 domain-containing protein -
PIC88_RS24565 (112734) 112734..113021 - 288 WP_000107535.1 hypothetical protein -
PIC88_RS24570 (113046) 113046..113252 - 207 WP_000547968.1 hypothetical protein -
PIC88_RS24575 (113322) 113322..113494 + 173 Protein_131 hypothetical protein -
PIC88_RS24580 (113492) 113492..113722 - 231 WP_071586998.1 hypothetical protein -
PIC88_RS24585 (113942) 113942..114067 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
PIC88_RS24590 (114009) 114009..114158 - 150 Protein_134 plasmid maintenance protein Mok -
- (114144) 114144..114368 - 225 NuclAT_0 - Antitoxin Detail
- (114144) 114144..114368 - 225 NuclAT_0 - Antitoxin Detail
- (114144) 114144..114368 - 225 NuclAT_0 - Antitoxin Detail
- (114144) 114144..114368 - 225 NuclAT_0 - Antitoxin Detail
PIC88_RS24595 (114180) 114180..114368 + 189 WP_001299721.1 hypothetical protein -
PIC88_RS24600 (114337) 114337..115099 - 763 Protein_136 plasmid SOS inhibition protein A -
PIC88_RS24605 (115096) 115096..115530 - 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
PIC88_RS24610 (115585) 115585..115782 - 198 Protein_138 hypothetical protein -
PIC88_RS24615 (115810) 115810..116043 - 234 WP_000005987.1 DUF905 family protein -
PIC88_RS24620 (116111) 116111..116650 - 540 WP_000290840.1 single-stranded DNA-binding protein -
PIC88_RS24625 (116676) 116676..116882 - 207 WP_000275856.1 hypothetical protein -
PIC88_RS24630 (116952) 116952..117032 + 81 Protein_142 hypothetical protein -
PIC88_RS24635 (117215) 117215..117384 - 170 Protein_143 hypothetical protein -
PIC88_RS24640 (117978) 117978..118949 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
PIC88_RS24645 (118949) 118949..120115 - 1167 WP_001238646.1 hypothetical protein VF
PIC88_RS24655 (121597) 121597..123798 - 2202 WP_000973520.1 Ferric aerobactin receptor VF
PIC88_RS24660 (123824) 123824..125157 - 1334 Protein_148 L-lysine N6-monooxygenase VF
PIC88_RS24665 (125154) 125154..126896 - 1743 WP_001015721.1 Aerobactin synthase VF
PIC88_RS24670 (126896) 126896..127843 - 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
PIC88_RS24675 (127844) 127844..129568 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
PIC88_RS24680 (129704) 129704..130897 + 1194 WP_000095526.1 MFS transporter -
PIC88_RS24685 (131277) 131277..131657 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
PIC88_RS24690 (131998) 131998..132411 - 414 Protein_154 phosphopyruvate hydratase -
PIC88_RS24695 (132409) 132409..132666 + 258 Protein_155 Tn3 family transposase -
PIC88_RS24700 (132900) 132900..133757 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
PIC88_RS24705 (133754) 133754..134611 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
PIC88_RS24710 (134608) 134608..135435 - 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
PIC88_RS24715 (135435) 135435..136349 - 915 WP_000949004.1 putative periplasmic iron-binding protein VF
PIC88_RS24720 (136705) 136705..137402 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
PIC88_RS24725 (137582) 137582..138095 - 514 Protein_161 DUF4113 domain-containing protein -
PIC88_RS24730 (138156) 138156..138260 - 105 Protein_162 AAA family ATPase -
PIC88_RS24735 (138262) 138262..138585 - 324 Protein_163 IS21 family transposase IS21 Transposase
PIC88_RS24740 (139331) 139331..140308 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
PIC88_RS24745 (140593) 140593..141333 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
PIC88_RS24750 (141454) 141454..141642 - 189 WP_001324033.1 hypothetical protein -
PIC88_RS24755 (142017) 142017..142919 - 903 WP_001312822.1 hypothetical protein VF
PIC88_RS24760 (142988) 142988..144097 - 1110 WP_000771475.1 SDR family oxidoreductase -
PIC88_RS24765 (144530) 144530..145483 - 954 WP_000280980.1 Protease 7 VF
PIC88_RS24770 (146780) 146780..146959 - 180 Protein_170 integrase core domain-containing protein -
PIC88_RS24775 (147098) 147098..148311 + 1214 WP_162842477.1 IS3 family transposase IS629 Transposase
PIC88_RS24780 (148459) 148459..148784 - 326 Protein_172 IS3 family transposase ISLad1 Transposase
PIC88_RS24785 (148830) 148830..149170 + 341 Protein_173 IS3 family transposase -
PIC88_RS24790 (149765) 149765..150952 + 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
PIC88_RS24795 (150949) 150949..152889 + 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
PIC88_RS24800 (152893) 152893..154263 + 1371 WP_001312828.1 efflux transporter outer membrane subunit -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance