MGE detailed information
MGE type: Conjugative plasmid MGE length: 90243 bp
Accession: NZ_CP116170 Location: 1..90243 Organism: Escherichia coli strain DETEC-P1056 Replicon: plasmid pDETEC81
Accession: NZ_CP116170 Location: 1..90243 Organism: Escherichia coli strain DETEC-P1056 Replicon: plasmid pDETEC81
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC86_RS23165 (446) | 446..928 | - | 483 | WP_074149688.1 | hypothetical protein | - |
| PIC86_RS23170 (921) | 921..968 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| PIC86_RS23175 (959) | 959..1210 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| PIC86_RS23180 (1227) | 1227..1484 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| PIC86_RS23185 (1747) | 1747..1893 | - | 147 | Protein_5 | Hok/Gef family protein | - |
| - (1937) | 1937..1998 | + | 62 | NuclAT_1 | - | - |
| - (1937) | 1937..1998 | + | 62 | NuclAT_1 | - | - |
| - (1937) | 1937..1998 | + | 62 | NuclAT_1 | - | - |
| - (1937) | 1937..1998 | + | 62 | NuclAT_1 | - | - |
| PIC86_RS23190 (2581) | 2581..2793 | - | 213 | WP_032084501.1 | hypothetical protein | - |
| PIC86_RS23195 (2927) | 2927..3487 | - | 561 | WP_063073483.1 | fertility inhibition protein FinO | - |
| PIC86_RS23200 (3542) | 3542..4288 | - | 747 | WP_063073482.1 | conjugal transfer pilus acetylase TraX | - |
| PIC86_RS23205 (4308) | 4308..9578 | - | 5271 | WP_271292792.1 | Multifunctional conjugation protein TraI | Relaxase |
| PIC86_RS23210 (9578) | 9578..11740 | - | 2163 | WP_001332348.1 | type IV conjugative transfer system coupling protein TraD | - |
| PIC86_RS23215 (11992) | 11992..12723 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PIC86_RS23220 (12737) | 12737..13246 | - | 510 | WP_063073480.1 | conjugal transfer entry exclusion protein TraS | - |
| PIC86_RS23225 (13243) | 13243..16068 | - | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PIC86_RS23230 (16065) | 16065..17438 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| PIC86_RS23235 (17438) | 17438..17800 | - | 363 | WP_074149687.1 | P-type conjugative transfer protein TrbJ | - |
| PIC86_RS23240 (17730) | 17730..18275 | - | 546 | WP_000052614.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PIC86_RS23245 (18262) | 18262..18546 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PIC86_RS23250 (18665) | 18665..19012 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| PIC86_RS23255 (19028) | 19028..19771 | - | 744 | WP_063073478.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PIC86_RS23260 (19764) | 19764..20021 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| PIC86_RS23265 (20048) | 20048..21856 | - | 1809 | WP_033804337.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PIC86_RS23270 (21853) | 21853..22491 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PIC86_RS23275 (22500) | 22500..23492 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PIC86_RS23280 (23489) | 23489..24121 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PIC86_RS23285 (24118) | 24118..24504 | - | 387 | WP_001585100.1 | type-F conjugative transfer system protein TrbI | - |
| PIC86_RS23290 (24501) | 24501..27128 | - | 2628 | WP_033804336.1 | type IV secretion system protein TraC | - |
| PIC86_RS23295 (27287) | 27287..27508 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| PIC86_RS23300 (27643) | 27643..28158 | - | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PIC86_RS23305 (28158) | 28158..28475 | - | 318 | WP_024189706.1 | conjugal transfer protein TrbD | - |
| PIC86_RS23310 (28462) | 28462..29049 | - | 588 | WP_063073477.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PIC86_RS23315 (29039) | 29039..30466 | - | 1428 | WP_000146636.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PIC86_RS23320 (30466) | 30466..31194 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PIC86_RS23325 (31181) | 31181..31747 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PIC86_RS23330 (31769) | 31769..32080 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PIC86_RS23335 (32095) | 32095..32460 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| PIC86_RS23340 (32494) | 32494..32721 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| PIC86_RS23345 (32816) | 32816..33502 | - | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| PIC86_RS23350 (33693) | 33693..34076 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PIC86_RS23355 (34353) | 34353..35000 | + | 648 | WP_148726238.1 | hypothetical protein | VF |
| PIC86_RS23360 (35297) | 35297..36118 | - | 822 | WP_033804334.1 | DUF932 domain-containing protein | - |
| PIC86_RS23365 (36237) | 36237..36524 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| PIC86_RS23370 (36549) | 36549..36755 | - | 207 | WP_033804333.1 | hypothetical protein | - |
| PIC86_RS23375 (36825) | 36825..36998 | + | 174 | Protein_43 | hypothetical protein | - |
| PIC86_RS23380 (36996) | 36996..37226 | - | 231 | WP_071845785.1 | hypothetical protein | - |
| PIC86_RS23385 (37446) | 37446..37571 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PIC86_RS23390 (37513) | 37513..37662 | - | 150 | Protein_46 | plasmid maintenance protein Mok | - |
| - (37648) | 37648..37872 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (37648) | 37648..37872 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (37648) | 37648..37872 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (37648) | 37648..37872 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| PIC86_RS23395 (37841) | 37841..38603 | - | 763 | Protein_47 | plasmid SOS inhibition protein A | - |
| PIC86_RS23400 (38600) | 38600..39034 | - | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| PIC86_RS23405 (39089) | 39089..41047 | - | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| PIC86_RS23410 (41112) | 41112..41345 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| PIC86_RS23415 (41407) | 41407..41859 | - | 453 | WP_000290842.1 | single-stranded DNA-binding protein | - |
| PIC86_RS23420 (41885) | 41885..42091 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| PIC86_RS23425 (42332) | 42332..42601 | - | 270 | WP_071977877.1 | hypothetical protein | - |
| PIC86_RS23430 (42502) | 42502..42726 | - | 225 | WP_016238251.1 | hypothetical protein | - |
| PIC86_RS23435 (42752) | 42752..43315 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| PIC86_RS23440 (43363) | 43363..44724 | - | 1362 | WP_014106968.1 | DUF3560 domain-containing protein | - |
| PIC86_RS23445 (44776) | 44776..45006 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| PIC86_RS23450 (46044) | 46044..46235 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| PIC86_RS23455 (46232) | 46232..46666 | - | 435 | WP_014106967.1 | DUF1380 family protein | - |
| PIC86_RS23460 (46713) | 46713..47138 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| PIC86_RS23465 (47555) | 47555..48331 | - | 777 | WP_063073488.1 | hypothetical protein | - |
| PIC86_RS23470 (48382) | 48382..48900 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| PIC86_RS23475 (48830) | 48830..49051 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| PIC86_RS23480 (49052) | 49052..49735 | - | 684 | WP_001775017.1 | DNA methylase | - |
| PIC86_RS23485 (49812) | 49812..50117 | - | 306 | WP_063073472.1 | hypothetical protein | - |
| PIC86_RS23490 (50121) | 50121..51023 | - | 903 | WP_148934335.1 | DUF1281 domain-containing protein | - |
| PIC86_RS23495 (51441) | 51441..51689 | + | 249 | WP_001775014.1 | DinI-like family protein | - |
| PIC86_RS23500 (51686) | 51686..52123 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIC86_RS23505 (52123) | 52123..53393 | + | 1271 | Protein_69 | Y-family DNA polymerase | - |
| PIC86_RS23510 (53398) | 53398..53790 | - | 393 | WP_063073471.1 | plasmid partitioning/stability family protein | - |
| PIC86_RS23515 (53795) | 53795..54766 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| PIC86_RS23520 (54995) | 54995..55639 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| PIC86_RS23525 (55633) | 55633..55908 | + | 276 | WP_050858693.1 | hypothetical protein | - |
| PIC86_RS23530 (56060) | 56060..56851 | - | 792 | WP_000016494.1 | site-specific integrase | - |
| PIC86_RS23535 (56848) | 56848..57354 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| PIC86_RS23540 (57345) | 57345..58049 | + | 705 | WP_001775011.1 | IS6 family transposase IS15DI | Transposase |
| PIC86_RS23545 (58196) | 58196..58372 | - | 177 | Protein_77 | hypothetical protein | - |
| PIC86_RS23550 (58329) | 58329..58559 | + | 231 | WP_063073411.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIC86_RS23555 (58556) | 58556..58972 | + | 417 | WP_063073410.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIC86_RS23560 (59046) | 59046..60608 | + | 1563 | WP_063073409.1 | AAA family ATPase | - |
| PIC86_RS23565 (60593) | 60593..61615 | + | 1023 | WP_063073408.1 | hypothetical protein | - |
| PIC86_RS23570 (61902) | 61902..62132 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| PIC86_RS23575 (62129) | 62129..62224 | + | 96 | Protein_83 | VapC toxin family PIN domain ribonuclease | - |
| PIC86_RS23580 (62283) | 62283..63067 | - | 785 | Protein_84 | IS21-like element helper ATPase IstB | - |
| PIC86_RS23585 (63067) | 63067..63720 | - | 654 | Protein_85 | IS21 family transposase IS21 | Transposase |
| PIC86_RS23590 (65476) | 65476..66117 | + | 642 | WP_089533208.1 | hypothetical protein | - |
| PIC86_RS23595 (67292) | 67292..68269 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| PIC86_RS23600 (68554) | 68554..69294 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| PIC86_RS23605 (69415) | 69415..69549 | - | 135 | Protein_89 | serine/threonine protein kinase | - |
| PIC86_RS23610 (70051) | 70051..71550 | - | 1500 | WP_063073405.1 | alpha/beta hydrolase | - |
| PIC86_RS23615 (71643) | 71643..72592 | - | 950 | Protein_91 | Outer membrane protease OmpP | VF |
| PIC86_RS23625 (74392) | 74392..75360 | - | 969 | WP_020219382.1 | IS5 family transposase IS903B | Transposase |
| PIC86_RS23630 (75643) | 75643..79830 | + | 4188 | WP_223384816.1 | hypothetical protein | VF |
| PIC86_RS23635 (79932) | 79932..80912 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| PIC86_RS23645 (82048) | 82048..82305 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| PIC86_RS23650 (82374) | 82374..84071 | - | 1698 | WP_000401034.1 | sulfatase | - |
| PIC86_RS23655 (84167) | 84167..85303 | - | 1137 | WP_033804283.1 | Outer membrane porin protein OmpD | VF |
| PIC86_RS23660 (85857) | 85857..87085 | + | 1229 | WP_167654659.1 | IS3 family transposase IS2 | Transposase |
| PIC86_RS23665 (87154) | 87154..87343 | + | 190 | Protein_101 | IS66 family insertion sequence element accessory protein TnpB | - |
| PIC86_RS23670 (87346) | 87346..87534 | - | 189 | WP_063073487.1 | DUF1187 family protein | - |
| PIC86_RS23675 (87614) | 87614..88102 | + | 489 | Protein_103 | IS91 family transposase ISSbo1 | Transposase |
| PIC86_RS23680 (88369) | 88369..88644 | - | 276 | WP_063073486.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIC86_RS23685 (88644) | 88644..88928 | - | 285 | WP_062894229.1 | ribbon-helix-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|