MGE detailed information
MGE type: Genomic_island MGE length: 41686 bp
Accession: NZ_CP116159 Location: 3701022..3742707 Organism: Escherichia coli strain DETEC-P351 Replicon: chromosome
Accession: NZ_CP116159 Location: 3701022..3742707 Organism: Escherichia coli strain DETEC-P351 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC26_RS17875 (3696410) | 3696410..3697636 | + | 1227 | WP_050019106.1 | restriction endonuclease subunit S | - |
| PIC26_RS17880 (3697758) | 3697758..3700874 | + | 3117 | WP_000149676.1 | HsdR family type I site-specific deoxyribonuclease | - |
| PIC26_RS17885 (3701022) | 3701022..3701924 | - | 903 | Protein_3499 | IS5 family transposase ISKpn26 | Transposase |
| PIC26_RS17890 (3701925) | 3701925..3702777 | + | 853 | Protein_3500 | N-6 DNA methylase | - |
| PIC26_RS17895 (3702767) | 3702767..3703105 | + | 339 | WP_000090302.1 | hypothetical protein | - |
| PIC26_RS17900 (3703054) | 3703054..3703476 | + | 423 | Protein_3502 | IS3 family transposase ISLad1 | Transposase |
| PIC26_RS17905 (3703501) | 3703501..3704952 | + | 1452 | WP_000443938.1 | DUF262 domain-containing protein | - |
| PIC26_RS17910 (3704945) | 3704945..3706987 | + | 2043 | WP_000995975.1 | DUF262 domain-containing protein | - |
| PIC26_RS17915 (3707174) | 3707174..3712909 | + | 5736 | WP_000108720.1 | DUF4011 domain-containing protein | - |
| PIC26_RS17920 (3713130) | 3713130..3713588 | - | 459 | Protein_3506 | IS3 family transposase ISEc14 | Transposase |
| PIC26_RS17925 (3713669) | 3713669..3714535 | - | 867 | Protein_3507 | reverse transcriptase domain-containing protein | - |
| PIC26_RS17930 (3714591) | 3714591..3715288 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| PIC26_RS17935 (3715326) | 3715326..3716957 | + | 1632 | WP_070749884.1 | hypothetical protein | - |
| PIC26_RS17940 (3717050) | 3717050..3717645 | - | 596 | Protein_3510 | hypothetical protein | - |
| PIC26_RS17950 (3718146) | 3718146..3719399 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PIC26_RS17955 (3719411) | 3719411..3720514 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PIC26_RS17960 (3720802) | 3720802..3721857 | + | 1056 | WP_039023169.1 | phosphoporin PhoE | - |
| PIC26_RS17965 (3721896) | 3721896..3722297 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3723015) | 3723015..3723095 | - | 81 | NuclAT_11 | - | - |
| - (3723015) | 3723015..3723095 | - | 81 | NuclAT_11 | - | - |
| - (3723015) | 3723015..3723095 | - | 81 | NuclAT_11 | - | - |
| - (3723015) | 3723015..3723095 | - | 81 | NuclAT_11 | - | - |
| PIC26_RS17970 (3722355) | 3722355..3723599 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| PIC26_RS17975 (3723691) | 3723691..3724149 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| PIC26_RS17980 (3724410) | 3724410..3725867 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| PIC26_RS17985 (3725924) | 3725924..3726445 | - | 522 | Protein_3518 | peptide chain release factor H | - |
| PIC26_RS17990 (3726441) | 3726441..3726647 | - | 207 | Protein_3519 | RtcB family protein | - |
| PIC26_RS17995 (3726965) | 3726965..3727417 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| PIC26_RS18000 (3727427) | 3727427..3727825 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| PIC26_RS18005 (3727828) | 3727828..3728121 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| PIC26_RS18010 (3728173) | 3728173..3729228 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| PIC26_RS18015 (3729299) | 3729299..3730084 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| PIC26_RS18020 (3730056) | 3730056..3731768 | + | 1713 | Protein_3525 | Flagellar biosynthesis protein FlhA | VF |
| PIC26_RS18025 (3731992) | 3731992..3732489 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| PIC26_RS18030 (3732665) | 3732665..3733414 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| PIC26_RS18035 (3733624) | 3733624..3733884 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PIC26_RS18040 (3733887) | 3733887..3734165 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PIC26_RS18045 (3734321) | 3734321..3735061 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PIC26_RS18050 (3735032) | 3735032..3735799 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PIC26_RS18055 (3736005) | 3736005..3736583 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PIC26_RS18060 (3736823) | 3736823..3739267 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| PIC26_RS18065 (3739310) | 3739310..3739756 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PIC26_RS18070 (3739937) | 3739937..3740707 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| PIC26_RS18075 (3740748) | 3740748..3741884 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| PIC26_RS18080 (3742315) | 3742315..3742707 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| PIC26_RS18085 (3742685) | 3742685..3746917 | - | 4233 | WP_039023185.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|