MGE detailed information
MGE type: Genomic_island MGE length: 24410 bp
Accession: NZ_CP116136 Location: 4494597..4519006 Organism: Escherichia coli strain DETEC-P649 Replicon: chromosome
Accession: NZ_CP116136 Location: 4494597..4519006 Organism: Escherichia coli strain DETEC-P649 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB66_RS21385 (4491222) | 4491222..4492316 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| PIB66_RS21390 (4492335) | 4492335..4493585 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| PIB66_RS21395 (4493669) | 4493669..4494604 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| PIB66_RS21400 (4494597) | 4494597..4495532 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| PIB66_RS21405 (4496068) | 4496068..4496520 | - | 453 | WP_000558152.1 | acyltransferase | - |
| PIB66_RS21410 (4497041) | 4497041..4497772 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| PIB66_RS21415 (4498442) | 4498442..4498972 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| PIB66_RS21420 (4500135) | 4500135..4501358 | - | 1224 | WP_001107215.1 | hypothetical protein | - |
| PIB66_RS21425 (4501459) | 4501459..4502343 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| PIB66_RS21430 (4502546) | 4502546..4503226 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIB66_RS21435 (4503374) | 4503374..4504051 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| PIB66_RS21440 (4504057) | 4504057..4504290 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| PIB66_RS21445 (4504380) | 4504380..4505198 | + | 819 | WP_023909075.1 | DUF932 domain-containing protein | - |
| PIB66_RS21450 (4505290) | 4505290..4505775 | + | 486 | WP_001586019.1 | antirestriction protein | - |
| PIB66_RS21455 (4505791) | 4505791..4506267 | + | 477 | WP_001186773.1 | RadC family protein | - |
| PIB66_RS21460 (4506330) | 4506330..4506551 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PIB66_RS21465 (4506714) | 4506714..4507082 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIB66_RS21470 (4507172) | 4507172..4507546 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIB66_RS21475 (4507543) | 4507543..4508031 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| PIB66_RS21480 (4508043) | 4508043..4508240 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PIB66_RS21485 (4508337) | 4508337..4508906 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| PIB66_RS21490 (4509655) | 4509655..4511193 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIB66_RS21495 (4511559) | 4511559..4512893 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIB66_RS21500 (4512973) | 4512973..4515120 | + | 2148 | WP_089423814.1 | lysine decarboxylase CadA | - |
| PIB66_RS21505 (4515179) | 4515179..4516636 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| PIB66_RS21510 (4516873) | 4516873..4518390 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| PIB66_RS21515 (4518509) | 4518509..4518682 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIB66_RS21520 (4518710) | 4518710..4519006 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIB66_RS21525 (4519235) | 4519235..4519507 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIB66_RS21530 (4519519) | 4519519..4519749 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIB66_RS21535 (4519929) | 4519929..4521560 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PIB66_RS21540 (4521557) | 4521557..4522276 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|