MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98478 bp
Accession: NZ_CP116124 Location: 1..98478 Organism: Escherichia coli strain DETEC-P666 Replicon: plasmid pDETEC32
Accession: NZ_CP116124 Location: 1..98478 Organism: Escherichia coli strain DETEC-P666 Replicon: plasmid pDETEC32
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB57_RS23805 (1301) | 1301..2041 | - | 741 | WP_016238487.1 | tyrosine-type recombinase/integrase | - |
| PIB57_RS23810 (2411) | 2411..2700 | - | 290 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIB57_RS23815 (2687) | 2687..2955 | - | 269 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| PIB57_RS23820 (3487) | 3487..4656 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| PIB57_RS23825 (4689) | 4689..4817 | + | 129 | Protein_5 | IS481 family transposase | - |
| PIB57_RS23830 (4942) | 4942..5145 | - | 204 | Protein_6 | hypothetical protein | - |
| PIB57_RS23835 (5251) | 5251..5526 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PIB57_RS23840 (5526) | 5526..5810 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PIB57_RS23845 (6415) | 6415..7167 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| PIB57_RS23850 (7213) | 7213..8178 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| PIB57_RS23855 (8211) | 8211..8591 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| PIB57_RS23860 (8616) | 8616..9506 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| PIB57_RS23865 (9907) | 9907..10347 | + | 441 | Protein_13 | zinc-binding dehydrogenase | - |
| PIB57_RS23870 (10478) | 10478..11356 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| PIB57_RS23875 (11346) | 11346..12233 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| PIB57_RS23880 (12244) | 12244..13068 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| PIB57_RS23885 (13074) | 13074..14147 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PIB57_RS23890 (14140) | 14140..15450 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| PIB57_RS23895 (15509) | 15509..15817 | - | 309 | Protein_19 | IS4 family transposase ISEc13 | Transposase |
| PIB57_RS23900 (15894) | 15894..16067 | - | 174 | WP_000338295.1 | Tn3 family transposase ISPsy39 | Transposase |
| PIB57_RS23905 (16149) | 16149..16629 | - | 481 | Protein_21 | IS3 family transposase IS629 | Transposase |
| PIB57_RS23910 (16713) | 16713..18221 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| PIB57_RS23915 (18894) | 18894..19615 | - | 722 | Protein_23 | IS3 family transposase IS629 | Transposase |
| PIB57_RS23920 (19640) | 19640..20344 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| PIB57_RS23925 (20402) | 20402..20932 | - | 531 | Protein_25 | histidine-type phosphatase | - |
| PIB57_RS23930 (21054) | 21054..21539 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| PIB57_RS23935 (21564) | 21564..22049 | - | 486 | WP_001267177.1 | TlpA disulfide reductase family protein | - |
| PIB57_RS23940 (22036) | 22036..22731 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PIB57_RS23945 (22736) | 22736..23866 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| PIB57_RS23950 (23856) | 23856..25139 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| PIB57_RS23955 (25142) | 25142..26521 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| PIB57_RS23960 (26625) | 26625..27152 | - | 528 | WP_000178050.1 | iron transporter | - |
| PIB57_RS23965 (27193) | 27193..29079 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| PIB57_RS23970 (29426) | 29426..30187 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| PIB57_RS23975 (30424) | 30424..30930 | - | 507 | WP_080177532.1 | protein disulfide oxidoreductase | - |
| PIB57_RS23980 (30920) | 30920..31090 | - | 171 | Protein_36 | DsbA family protein | - |
| PIB57_RS23985 (31228) | 31228..31341 | - | 114 | Protein_37 | IS6 family transposase | - |
| PIB57_RS23990 (31541) | 31541..32238 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| PIB57_RS23995 (32256) | 32256..32825 | + | 570 | Protein_39 | IS4-like element ISVsa5 family transposase | - |
| PIB57_RS24000 (32874) | 32874..33578 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIB57_RS24005 (33820) | 33820..34680 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIB57_RS24010 (34830) | 34830..34928 | - | 99 | Protein_42 | IS1 family transposase | - |
| PIB57_RS24015 (34957) | 34957..36267 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| PIB57_RS24020 (36552) | 36552..36953 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIB57_RS24025 (36886) | 36886..37143 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIB57_RS24030 (37236) | 37236..37889 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIB57_RS24035 (38829) | 38829..39677 | - | 849 | WP_139471275.1 | incFII family plasmid replication initiator RepA | - |
| PIB57_RS24040 (39670) | 39670..39744 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| PIB57_RS24045 (39981) | 39981..40235 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| PIB57_RS24050 (40532) | 40532..40666 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (40711) | 40711..40771 | + | 61 | NuclAT_2 | - | - |
| - (40711) | 40711..40771 | + | 61 | NuclAT_2 | - | - |
| - (40711) | 40711..40771 | + | 61 | NuclAT_2 | - | - |
| - (40711) | 40711..40771 | + | 61 | NuclAT_2 | - | - |
| PIB57_RS24055 (40738) | 40738..41024 | - | 287 | Protein_51 | DUF2726 domain-containing protein | - |
| PIB57_RS24060 (41537) | 41537..41749 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| PIB57_RS24065 (41880) | 41880..42440 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| PIB57_RS24070 (42495) | 42495..43241 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| PIB57_RS24075 (43261) | 43261..48531 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| PIB57_RS24080 (48531) | 48531..50729 | - | 2199 | WP_024623315.1 | type IV conjugative transfer system coupling protein TraD | - |
| PIB57_RS24085 (50726) | 50726..51505 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| PIB57_RS24090 (51708) | 51708..52439 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| PIB57_RS24095 (52471) | 52471..52968 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| PIB57_RS24100 (52987) | 52987..55806 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PIB57_RS24105 (55803) | 55803..57176 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| PIB57_RS24110 (57163) | 57163..57555 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| PIB57_RS24115 (57536) | 57536..57883 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| PIB57_RS24120 (57813) | 57813..58358 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PIB57_RS24125 (58345) | 58345..58629 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PIB57_RS24130 (58756) | 58756..59076 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| PIB57_RS24140 (60058) | 60058..60345 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| PIB57_RS24145 (60370) | 60370..60576 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| PIB57_RS24150 (60646) | 60646..60819 | + | 174 | Protein_70 | hypothetical protein | - |
| PIB57_RS24155 (60817) | 60817..61047 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| PIB57_RS24160 (61267) | 61267..61392 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PIB57_RS24165 (61334) | 61334..61483 | - | 150 | Protein_73 | plasmid maintenance protein Mok | - |
| - (61469) | 61469..61596 | - | 128 | NuclAT_0 | - | - |
| - (61469) | 61469..61596 | - | 128 | NuclAT_0 | - | - |
| - (61469) | 61469..61596 | - | 128 | NuclAT_0 | - | - |
| - (61469) | 61469..61596 | - | 128 | NuclAT_0 | - | - |
| - (63038) | 63038..63140 | - | 103 | NuclAT_1 | - | - |
| - (63038) | 63038..63140 | - | 103 | NuclAT_1 | - | - |
| - (63038) | 63038..63140 | - | 103 | NuclAT_1 | - | - |
| - (63038) | 63038..63140 | - | 103 | NuclAT_1 | - | - |
| PIB57_RS24175 (63109) | 63109..63871 | - | 763 | Protein_75 | plasmid SOS inhibition protein A | - |
| PIB57_RS24180 (63868) | 63868..64302 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| PIB57_RS24185 (64357) | 64357..66315 | - | 1959 | WP_113519520.1 | ParB/RepB/Spo0J family partition protein | - |
| PIB57_RS24190 (66381) | 66381..66614 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| PIB57_RS24195 (66677) | 66677..67216 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| PIB57_RS24200 (67242) | 67242..67448 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| PIB57_RS24205 (67689) | 67689..67952 | - | 264 | WP_071781663.1 | hypothetical protein | - |
| PIB57_RS24210 (67859) | 67859..68077 | - | 219 | WP_001496291.1 | hypothetical protein | - |
| PIB57_RS24215 (68103) | 68103..68666 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| PIB57_RS24220 (68714) | 68714..70075 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| PIB57_RS24225 (70127) | 70127..70357 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| PIB57_RS24230 (71392) | 71392..71583 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| PIB57_RS24235 (71580) | 71580..72002 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| PIB57_RS24240 (72049) | 72049..72474 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| PIB57_RS24245 (72891) | 72891..73667 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| PIB57_RS24250 (73718) | 73718..74236 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| PIB57_RS24255 (74166) | 74166..74387 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| PIB57_RS24260 (74388) | 74388..75071 | - | 684 | WP_000086185.1 | DNA methylase | - |
| PIB57_RS24265 (75148) | 75148..75459 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| PIB57_RS24270 (75456) | 75456..76358 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| PIB57_RS24275 (77225) | 77225..78196 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PIB57_RS24280 (78196) | 78196..79362 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| PIB57_RS24285 (79950) | 79950..80705 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| PIB57_RS24290 (81479) | 81479..82285 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| PIB57_RS24295 (82286) | 82286..82591 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PIB57_RS24300 (82593) | 82593..82811 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PIB57_RS24305 (83519) | 83519..84514 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| PIB57_RS24310 (84518) | 84518..85450 | + | 933 | WP_000991831.1 | S-4TM family putative pore-forming effector | - |
| PIB57_RS24315 (85748) | 85748..86836 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| PIB57_RS24320 (86829) | 86829..87707 | + | 879 | WP_225522546.1 | hypothetical protein | - |
| PIB57_RS24325 (87764) | 87764..89329 | - | 1566 | WP_001586226.1 | AAA family ATPase | - |
| PIB57_RS24330 (89640) | 89640..90128 | + | 489 | WP_024190173.1 | hypothetical protein | - |
| PIB57_RS24335 (90162) | 90162..91295 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| PIB57_RS24340 (91462) | 91462..91851 | - | 390 | WP_001403960.1 | hypothetical protein | - |
| PIB57_RS24345 (91797) | 91797..92234 | - | 438 | WP_016238492.1 | hypothetical protein | - |
| PIB57_RS24350 (92247) | 92247..92748 | - | 502 | Protein_110 | HEPN family nuclease | - |
| PIB57_RS24355 (93139) | 93139..95760 | + | 2622 | WP_016238490.1 | hypothetical protein | - |
| PIB57_RS24360 (95959) | 95959..96189 | + | 231 | WP_016238489.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| PIB57_RS24365 (96186) | 96186..96502 | + | 317 | Protein_113 | type II toxin-antitoxin system VapC family toxin | - |
| PIB57_RS24370 (96558) | 96558..96775 | - | 218 | Protein_114 | transposase | - |
| PIB57_RS24375 (96776) | 96776..97306 | - | 531 | WP_000348884.1 | GNAT family N-acetyltransferase | - |
| PIB57_RS24380 (97310) | 97310..97579 | - | 270 | WP_016238488.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|