MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP116110 Location: 2313864..2326673 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Accession: NZ_CP116110 Location: 2313864..2326673 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC84_RS11425 (2313864) | 2313864..2314130 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| PIC84_RS11430 (2314130) | 2314130..2315452 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| PIC84_RS11435 (2315764) | 2315764..2315972 | + | 209 | Protein_2235 | AraC family transcriptional regulator | - |
| PIC84_RS11440 (2316227) | 2316227..2317453 | + | 1227 | Protein_2236 | Outer membrane usher protein FimD | VF |
| PIC84_RS11445 (2317467) | 2317467..2317997 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| PIC84_RS11450 (2318010) | 2318010..2318513 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| PIC84_RS11455 (2318572) | 2318572..2319486 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| PIC84_RS11460 (2319820) | 2319820..2322099 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| PIC84_RS11465 (2322347) | 2322347..2322544 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| PIC84_RS11470 (2322619) | 2322619..2323380 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| PIC84_RS11475 (2323782) | 2323782..2325464 | + | 1683 | WP_001295684.1 | sulfatase | - |
| PIC84_RS11480 (2325516) | 2325516..2326673 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| PIC84_RS11485 (2326639) | 2326639..2326761 | - | 123 | WP_123039029.1 | hypothetical protein | - |
| PIC84_RS11490 (2326964) | 2326964..2328649 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| PIC84_RS11495 (2328687) | 2328687..2331059 | + | 2373 | WP_049284067.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |