MGE detailed information
MGE type: Genomic_island MGE length: 33812 bp
Accession: NZ_CP116094 Location: 833649..867460 Organism: Escherichia coli strain DETEC-S560 Replicon: chromosome
Accession: NZ_CP116094 Location: 833649..867460 Organism: Escherichia coli strain DETEC-S560 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC78_RS03975 (832826) | 832826..833218 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| PIC78_RS03980 (833649) | 833649..834269 | + | 621 | Protein_768 | ISAs1 family transposase ISEc1 | Transposase |
| PIC78_RS03985 (834327) | 834327..835295 | - | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| PIC78_RS03990 (835330) | 835330..835851 | + | 522 | Protein_770 | ISAs1 family transposase ISEc1 | Transposase |
| PIC78_RS03995 (835892) | 835892..836662 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| PIC78_RS04000 (836843) | 836843..837289 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PIC78_RS04005 (837332) | 837332..839776 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| PIC78_RS04010 (840016) | 840016..840594 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PIC78_RS04015 (840800) | 840800..841567 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PIC78_RS04020 (841538) | 841538..842278 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PIC78_RS04025 (842434) | 842434..842712 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PIC78_RS04030 (842715) | 842715..842975 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PIC78_RS04035 (843185) | 843185..843934 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| PIC78_RS04040 (844110) | 844110..844607 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| PIC78_RS04045 (844831) | 844831..846543 | - | 1713 | Protein_781 | Flagellar biosynthesis protein FlhA | VF |
| PIC78_RS04050 (846515) | 846515..847300 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| PIC78_RS04055 (847371) | 847371..848426 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| PIC78_RS04060 (848478) | 848478..848771 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| PIC78_RS04065 (848774) | 848774..849172 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| PIC78_RS04070 (849182) | 849182..849634 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| PIC78_RS04075 (849952) | 849952..850158 | + | 207 | Protein_787 | RtcB family protein | - |
| PIC78_RS04080 (850154) | 850154..850675 | + | 522 | Protein_788 | peptide chain release factor H | - |
| PIC78_RS04085 (850732) | 850732..852189 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| PIC78_RS04090 (852450) | 852450..852908 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (853504) | 853504..853584 | + | 81 | NuclAT_11 | - | - |
| - (853504) | 853504..853584 | + | 81 | NuclAT_11 | - | - |
| - (853504) | 853504..853584 | + | 81 | NuclAT_11 | - | - |
| - (853504) | 853504..853584 | + | 81 | NuclAT_11 | - | - |
| PIC78_RS04095 (853000) | 853000..854244 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| PIC78_RS04100 (854302) | 854302..854703 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| PIC78_RS04105 (854742) | 854742..855797 | - | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| PIC78_RS04110 (856085) | 856085..857188 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PIC78_RS04115 (857200) | 857200..858453 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PIC78_RS04125 (858807) | 858807..860015 | + | 1209 | WP_000772656.1 | Prophage integrase IntS ; Integrase | Integrase |
| PIC78_RS04130 (860257) | 860257..861465 | + | 1209 | WP_001087767.1 | N-6 DNA methylase | - |
| PIC78_RS04135 (861458) | 861458..863164 | + | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| PIC78_RS04140 (863142) | 863142..864212 | + | 1071 | WP_000920172.1 | hypothetical protein | - |
| PIC78_RS04145 (865201) | 865201..865455 | - | 255 | Protein_800 | IS21 family transposase ISSen3 | Transposase |
| PIC78_RS04150 (865452) | 865452..866473 | - | 1022 | Protein_801 | IS21 family transposase IS100kyp | Transposase |
| PIC78_RS04155 (866557) | 866557..866826 | - | 270 | Protein_802 | class I SAM-dependent methyltransferase | - |
| PIC78_RS04160 (866837) | 866837..867094 | - | 258 | WP_001333700.1 | YjhX family toxin | - |
| PIC78_RS04165 (867392) | 867392..867460 | - | 69 | Protein_804 | VOC family protein | - |
| PIC78_RS04170 (867469) | 867469..868212 | - | 744 | WP_001081495.1 | epimerase | - |
| PIC78_RS04175 (868223) | 868223..868513 | - | 291 | WP_000558519.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| PIC78_RS04180 (868562) | 868562..869437 | - | 876 | WP_000774142.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| PIC78_RS04185 (869466) | 869466..870488 | - | 1023 | WP_000155278.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| PIC78_RS04190 (870515) | 870515..871513 | - | 999 | WP_000197460.1 | autoinducer 2 ABC transporter permease LsrD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|