MGE detailed information
MGE type: Conjugative plasmid MGE length: 132207 bp
Accession: NZ_CP116072 Location: 1..132207 Organism: Escherichia coli strain DETEC-S589 Replicon: plasmid pDETEC77
Accession: NZ_CP116072 Location: 1..132207 Organism: Escherichia coli strain DETEC-S589 Replicon: plasmid pDETEC77
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC30_RS25810 (283) | 283..477 | + | 195 | Protein_0 | IS200-IS605 family transposase IS200C | Transposase |
| PIC30_RS25815 (606) | 606..1547 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| PIC30_RS25820 (1782) | 1782..3171 | - | 1390 | Protein_2 | ISNCY family transposase ISKpn21 | Transposase |
| PIC30_RS25825 (3481) | 3481..3630 | - | 150 | Protein_3 | IS3 family transposase IS2 | Transposase |
| PIC30_RS25830 (3808) | 3808..5001 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| PIC30_RS25835 (6243) | 6243..6980 | - | 738 | Protein_5 | IS3 family transposase IS2 | Transposase |
| PIC30_RS25840 (7033) | 7033..8195 | + | 1163 | WP_088846059.1 | IS3 family transposase ISEc17 | Transposase |
| PIC30_RS25845 (8212) | 8212..8732 | - | 521 | Protein_7 | IS3 family transposase IS2 | Transposase |
| PIC30_RS25850 (9357) | 9357..9650 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| PIC30_RS25855 (9708) | 9708..9907 | - | 200 | Protein_9 | lysis protein | - |
| PIC30_RS25860 (10461) | 10461..11485 | + | 1025 | Protein_10 | integrase core domain-containing protein | - |
| PIC30_RS25865 (12796) | 12796..13911 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| PIC30_RS25870 (14051) | 14051..17710 | + | 3660 | WP_169052417.1 | Multidrug efflux ATP-binding/permease protein | VF |
| PIC30_RS25875 (17814) | 17814..19043 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| PIC30_RS25880 (19128) | 19128..20084 | + | 957 | WP_271287428.1 | hypothetical protein | VF |
| PIC30_RS25885 (20129) | 20129..22306 | - | 2178 | WP_097733400.1 | Ferric enterobactin receptor | VF |
| PIC30_RS25890 (23172) | 23172..24206 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| PIC30_RS25895 (24387) | 24387..24688 | + | 302 | Protein_17 | hypothetical protein | - |
| PIC30_RS25900 (24766) | 24766..25074 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| PIC30_RS25905 (25227) | 25227..25352 | - | 126 | Protein_19 | type II toxin-antitoxin system toxin YacB | - |
| PIC30_RS25910 (25352) | 25352..25620 | - | 269 | Protein_20 | type II toxin-antitoxin system antitoxin YacA | - |
| PIC30_RS25915 (26231) | 26231..27505 | + | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| PIC30_RS25920 (27498) | 27498..29594 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| PIC30_RS25925 (29764) | 29764..30075 | - | 312 | WP_001259758.1 | colicin V | - |
| PIC30_RS25930 (30053) | 30053..30289 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| PIC30_RS25935 (30408) | 30408..30851 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| PIC30_RS25940 (30823) | 30823..31227 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| PIC30_RS25945 (31229) | 31229..31498 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| PIC30_RS25950 (31495) | 31495..32475 | + | 981 | WP_001017346.1 | NAD(P)-binding domain-containing protein | - |
| PIC30_RS25955 (32551) | 32551..32931 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| PIC30_RS25960 (32928) | 32928..33275 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| PIC30_RS25965 (33325) | 33325..34185 | + | 861 | Protein_31 | IS66 family transposase ISEc8 | Transposase |
| PIC30_RS25970 (34221) | 34221..37226 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PIC30_RS25975 (37390) | 37390..37947 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PIC30_RS25980 (38130) | 38130..38990 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIC30_RS25985 (39139) | 39139..39816 | + | 678 | Protein_35 | IS4 family transposase IS10R | Transposase |
| PIC30_RS25990 (39826) | 39826..40242 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| PIC30_RS25995 (40330) | 40330..40923 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| PIC30_RS26000 (41036) | 41036..42241 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| PIC30_RS26005 (42323) | 42323..42946 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| PIC30_RS26010 (42924) | 42924..43610 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| PIC30_RS26015 (43618) | 43618..44004 | - | 387 | WP_000460653.1 | hypothetical protein | - |
| PIC30_RS26020 (43997) | 43997..44317 | - | 321 | WP_000562367.1 | antibiotic biosynthesis monooxygenase | - |
| PIC30_RS26025 (44761) | 44761..45966 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| PIC30_RS26030 (46197) | 46197..46316 | + | 120 | Protein_44 | LysR family transcriptional regulator | - |
| PIC30_RS26035 (46332) | 46332..47540 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| PIC30_RS26040 (47701) | 47701..47928 | + | 228 | Protein_46 | CatA-like O-acetyltransferase | - |
| PIC30_RS26050 (48890) | 48890..49291 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIC30_RS26055 (49224) | 49224..49481 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIC30_RS26060 (49574) | 49574..50227 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIC30_RS26065 (50325) | 50325..50465 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| PIC30_RS26070 (51166) | 51166..52023 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| PIC30_RS26075 (52016) | 52016..52498 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| PIC30_RS26080 (52491) | 52491..52538 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| PIC30_RS26085 (52529) | 52529..52780 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| PIC30_RS26090 (52797) | 52797..53054 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| PIC30_RS26095 (53338) | 53338..53487 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (53531) | 53531..53592 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (53531) | 53531..53592 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (53531) | 53531..53592 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (53531) | 53531..53592 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| PIC30_RS26100 (53848) | 53848..53922 | - | 75 | Protein_58 | endonuclease | - |
| PIC30_RS26105 (54168) | 54168..54380 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| PIC30_RS26110 (54516) | 54516..55076 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| PIC30_RS26115 (55179) | 55179..56039 | - | 861 | WP_000704514.1 | Quorum-quenching protein AidA | VF |
| PIC30_RS26120 (56098) | 56098..56844 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| PIC30_RS26125 (56864) | 56864..62134 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| PIC30_RS26130 (62216) | 62216..62443 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PIC30_RS26135 (62443) | 62443..62841 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIC30_RS26140 (62850) | 62850..65003 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| PIC30_RS26145 (65256) | 65256..65987 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| PIC30_RS26150 (66019) | 66019..66516 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| PIC30_RS26155 (66532) | 66532..69354 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PIC30_RS26160 (69351) | 69351..70724 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| PIC30_RS26165 (70724) | 70724..71104 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| PIC30_RS26170 (71091) | 71091..71432 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| PIC30_RS26175 (71362) | 71362..71907 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PIC30_RS26180 (71894) | 71894..72178 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PIC30_RS26185 (72259) | 72259..72573 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| PIC30_RS26190 (72575) | 72575..72922 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| PIC30_RS26195 (72938) | 72938..73681 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PIC30_RS26200 (73674) | 73674..73931 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| PIC30_RS26205 (73958) | 73958..75766 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PIC30_RS26210 (75763) | 75763..76401 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PIC30_RS26215 (76410) | 76410..77402 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| PIC30_RS26220 (77399) | 77399..78031 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PIC30_RS26225 (78028) | 78028..78414 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| PIC30_RS26230 (78411) | 78411..81038 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| PIC30_RS26235 (81198) | 81198..81419 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| PIC30_RS26240 (81554) | 81554..82069 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PIC30_RS26245 (82066) | 82066..82317 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| PIC30_RS26250 (82329) | 82329..82526 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PIC30_RS26255 (82513) | 82513..83103 | - | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PIC30_RS26260 (83093) | 83093..84520 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PIC30_RS26265 (84520) | 84520..85248 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PIC30_RS26270 (85235) | 85235..85801 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PIC30_RS26275 (85823) | 85823..86134 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PIC30_RS26280 (86149) | 86149..86514 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| PIC30_RS26285 (86547) | 86547..86948 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PIC30_RS26290 (87041) | 87041..87730 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| PIC30_RS26295 (87917) | 87917..88300 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PIC30_RS26300 (88621) | 88621..89223 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| PIC30_RS26305 (89520) | 89520..90341 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| PIC30_RS26310 (90459) | 90459..90746 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| PIC30_RS26315 (90771) | 90771..90977 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| PIC30_RS26320 (91047) | 91047..91219 | + | 173 | Protein_102 | hypothetical protein | - |
| PIC30_RS26325 (91217) | 91217..91447 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| PIC30_RS26330 (91667) | 91667..91792 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PIC30_RS26335 (91734) | 91734..91883 | - | 150 | Protein_105 | plasmid maintenance protein Mok | - |
| - (91869) | 91869..92093 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91869) | 91869..92093 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91869) | 91869..92093 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (91869) | 91869..92093 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| PIC30_RS26340 (91905) | 91905..92093 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| PIC30_RS26345 (92062) | 92062..92824 | - | 763 | Protein_107 | plasmid SOS inhibition protein A | - |
| PIC30_RS26350 (92821) | 92821..93255 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| PIC30_RS26355 (93310) | 93310..93507 | - | 198 | Protein_109 | hypothetical protein | - |
| PIC30_RS26360 (93535) | 93535..93768 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| PIC30_RS26365 (93836) | 93836..94375 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| PIC30_RS26370 (94401) | 94401..94607 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| PIC30_RS26375 (94677) | 94677..94757 | + | 81 | Protein_113 | hypothetical protein | - |
| PIC30_RS26380 (94940) | 94940..95109 | - | 170 | Protein_114 | hypothetical protein | - |
| PIC30_RS26385 (95746) | 95746..96717 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PIC30_RS26390 (96717) | 96717..97883 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| PIC30_RS26400 (99365) | 99365..101566 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| PIC30_RS26405 (101592) | 101592..102925 | - | 1334 | Protein_119 | L-lysine N6-monooxygenase | VF |
| PIC30_RS26410 (102922) | 102922..104664 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| PIC30_RS26415 (104664) | 104664..105611 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| PIC30_RS26420 (105612) | 105612..107336 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| PIC30_RS26425 (107472) | 107472..108665 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| PIC30_RS26430 (109045) | 109045..109425 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| PIC30_RS26435 (109766) | 109766..110179 | - | 414 | Protein_125 | phosphopyruvate hydratase | - |
| PIC30_RS26440 (110177) | 110177..110434 | + | 258 | Protein_126 | Tn3 family transposase | - |
| PIC30_RS26445 (110668) | 110668..111525 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| PIC30_RS26450 (111522) | 111522..112379 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| PIC30_RS26455 (112376) | 112376..113203 | - | 828 | WP_021565963.1 | Manganese transport system ATP-binding protein MntB | VF |
| PIC30_RS26460 (113203) | 113203..114117 | - | 915 | WP_021526583.1 | putative periplasmic iron-binding protein | VF |
| PIC30_RS26465 (114473) | 114473..115170 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| PIC30_RS26470 (115350) | 115350..115863 | - | 514 | Protein_132 | DUF4113 domain-containing protein | - |
| PIC30_RS26475 (115924) | 115924..116028 | - | 105 | Protein_133 | AAA family ATPase | - |
| PIC30_RS26480 (116030) | 116030..116353 | - | 324 | Protein_134 | IS21 family transposase IS21 | Transposase |
| PIC30_RS26485 (117099) | 117099..118076 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| PIC30_RS26490 (118361) | 118361..119101 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| PIC30_RS26495 (119222) | 119222..119410 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| PIC30_RS26500 (119784) | 119784..120686 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| PIC30_RS26505 (120755) | 120755..121864 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| PIC30_RS26510 (122297) | 122297..123250 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| PIC30_RS26515 (124547) | 124547..124726 | - | 180 | Protein_141 | integrase core domain-containing protein | - |
| PIC30_RS26520 (124865) | 124865..126064 | + | 1200 | Protein_142 | IS3 family transposase IS629 | Transposase |
| PIC30_RS26525 (126212) | 126212..126537 | - | 326 | Protein_143 | IS3 family transposase ISLad1 | Transposase |
| PIC30_RS26530 (126583) | 126583..126923 | + | 341 | Protein_144 | IS3 family transposase | - |
| PIC30_RS26535 (127518) | 127518..128705 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PIC30_RS26540 (128702) | 128702..130642 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| PIC30_RS26545 (130646) | 130646..132016 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|