MGE detailed information
MGE type: Prophage MGE length: 49816 bp
Accession: NZ_CP116071 Location: 2027149..2076964 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Accession: NZ_CP116071 Location: 2027149..2076964 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC30_RS09590 (2026023) | 2026023..2026982 | - | 960 | WP_000140405.1 | yersiniabactin transcriptional regulator YbtA | - |
| PIC30_RS09595 (2027239) | 2027239..2028951 | + | 1713 | WP_001327954.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PIC30_RS09600 (2028938) | 2028938..2030740 | + | 1803 | WP_001304269.1 | Putative multidrug export ATP-binding/permease protein | VF |
| PIC30_RS09605 (2030733) | 2030733..2032013 | + | 1281 | WP_001286281.1 | Anhydromuropeptide permease | VF |
| PIC30_RS09610 (2032041) | 2032041..2033345 | + | 1305 | WP_000703040.1 | Salicylate synthase | VF |
| PIC30_RS09615 (2033539) | 2033539..2034801 | - | 1263 | Protein_1882 | Prophage integrase IntA ; Integrase | Integrase |
| PIC30_RS09625 (2035139) | 2035139..2035936 | - | 798 | WP_001350677.1 | DgsA anti-repressor MtfA | - |
| PIC30_RS09635 (2036147) | 2036147..2037197 | - | 1051 | Protein_1884 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PIC30_RS09640 (2037197) | 2037197..2037400 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| PIC30_RS09645 (2037459) | 2037459..2039939 | - | 2481 | WP_000048602.1 | exonuclease | - |
| PIC30_RS09650 (2040083) | 2040083..2040304 | - | 222 | WP_000560231.1 | cell division protein FtsZ | - |
| PIC30_RS09655 (2040350) | 2040350..2041198 | - | 849 | WP_000935606.1 | Rha family phage regulatory protein | - |
| PIC30_RS09660 (2041766) | 2041766..2041987 | + | 222 | WP_000202161.1 | hypothetical protein | - |
| PIC30_RS09670 (2042835) | 2042835..2043128 | - | 294 | WP_097494701.1 | hypothetical protein | - |
| PIC30_RS09675 (2043140) | 2043140..2043292 | - | 153 | WP_000379609.1 | DUF1391 family protein | - |
| PIC30_RS09680 (2043564) | 2043564..2043851 | - | 288 | WP_000936799.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PIC30_RS09685 (2043851) | 2043851..2044042 | - | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| PIC30_RS09690 (2044070) | 2044070..2044471 | - | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| PIC30_RS09695 (2044581) | 2044581..2044853 | + | 273 | WP_000887447.1 | YdaS family helix-turn-helix protein | - |
| PIC30_RS09700 (2044837) | 2044837..2045262 | + | 426 | WP_000693918.1 | toxin YdaT family protein | - |
| PIC30_RS09705 (2045334) | 2045334..2046404 | + | 1071 | WP_001262355.1 | hypothetical protein | - |
| PIC30_RS09710 (2046445) | 2046445..2046870 | + | 426 | WP_001151152.1 | DUF977 family protein | - |
| PIC30_RS09715 (2047045) | 2047045..2047710 | + | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| PIC30_RS09720 (2047948) | 2047948..2048103 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PIC30_RS09725 (2048271) | 2048271..2048549 | + | 279 | WP_024193993.1 | hypothetical protein | - |
| PIC30_RS09730 (2048551) | 2048551..2049600 | + | 1050 | WP_001265292.1 | DUF968 domain-containing protein | - |
| PIC30_RS09735 (2049613) | 2049613..2049987 | + | 375 | WP_001217427.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PIC30_RS09740 (2049984) | 2049984..2050805 | + | 822 | WP_001235237.1 | antitermination protein | - |
| PIC30_RS09745 (2051051) | 2051051..2051764 | + | 714 | WP_000342820.1 | hypothetical protein | - |
| PIC30_RS09770 (2052489) | 2052489..2052704 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| PIC30_RS09775 (2052709) | 2052709..2053023 | + | 315 | WP_000193273.1 | YdfR family protein | - |
| PIC30_RS09780 (2053079) | 2053079..2053612 | + | 534 | WP_001274707.1 | lysozyme | - |
| PIC30_RS09785 (2053829) | 2053829..2054011 | + | 183 | WP_032145233.1 | Rz1 family lipoprotein | - |
| PIC30_RS09790 (2054116) | 2054116..2054466 | + | 351 | WP_001140109.1 | HNH endonuclease signature motif containing protein | - |
| PIC30_RS09795 (2054614) | 2054614..2055096 | + | 483 | WP_271287403.1 | phage terminase small subunit P27 family | - |
| PIC30_RS09800 (2055096) | 2055096..2056853 | + | 1758 | WP_001140907.1 | terminase large subunit | - |
| PIC30_RS09805 (2056850) | 2056850..2057011 | + | 162 | WP_000811487.1 | hypothetical protein | - |
| PIC30_RS09810 (2057001) | 2057001..2058227 | + | 1227 | WP_000923131.1 | phage portal protein | - |
| PIC30_RS09815 (2058220) | 2058220..2058819 | + | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| PIC30_RS09820 (2058834) | 2058834..2060051 | + | 1218 | WP_000766108.1 | phage major capsid protein | - |
| PIC30_RS09825 (2060128) | 2060128..2060445 | + | 318 | WP_000719066.1 | head-tail connector protein | - |
| PIC30_RS09830 (2060454) | 2060454..2060792 | + | 339 | WP_001147814.1 | phage head closure protein | - |
| PIC30_RS09835 (2060792) | 2060792..2061238 | + | 447 | WP_000347792.1 | HK97 gp10 family phage protein | - |
| PIC30_RS09840 (2061235) | 2061235..2061579 | + | 345 | WP_001206306.1 | DUF3168 domain-containing protein | - |
| PIC30_RS09845 (2061640) | 2061640..2062344 | + | 705 | WP_000097526.1 | immunoglobulin domain-containing protein | - |
| PIC30_RS09850 (2062359) | 2062359..2062730 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| PIC30_RS09855 (2062742) | 2062742..2063032 | + | 291 | WP_001211636.1 | DUF4035 domain-containing protein | - |
| PIC30_RS09860 (2063079) | 2063079..2066306 | + | 3228 | WP_001552446.1 | phage tail tape measure protein | - |
| PIC30_RS09865 (2066284) | 2066284..2066640 | + | 357 | WP_001330090.1 | phage tail protein | - |
| PIC30_RS09870 (2066640) | 2066640..2067338 | + | 699 | WP_001152449.1 | phage minor tail protein L | - |
| PIC30_RS09875 (2067344) | 2067344..2068087 | + | 744 | WP_000140743.1 | C40 family peptidase | - |
| PIC30_RS09880 (2068084) | 2068084..2068632 | + | 549 | WP_000847631.1 | tail assembly protein | - |
| PIC30_RS09885 (2068693) | 2068693..2072391 | + | 3699 | WP_000515673.1 | phage tail protein | - |
| PIC30_RS09890 (2072459) | 2072459..2073045 | + | 587 | Protein_1931 | hypothetical protein | VF |
| PIC30_RS09895 (2073110) | 2073110..2075176 | + | 2067 | WP_001552192.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PIC30_RS09900 (2075173) | 2075173..2075451 | + | 279 | WP_001204579.1 | hypothetical protein | - |
| PIC30_RS09905 (2075461) | 2075461..2075751 | + | 291 | WP_000355702.1 | hypothetical protein | - |
| PIC30_RS09910 (2076251) | 2076251..2076964 | + | 714 | WP_000358619.1 | hypothetical protein | VF |
| PIC30_RS09915 (2076961) | 2076961..2077782 | + | 822 | WP_000734593.1 | cytolethal distending toxin type I nuclease subunit CdtB | - |
| PIC30_RS09920 (2077779) | 2077779..2078351 | + | 573 | WP_000859544.1 | cytolethal distending toxin type I subunit CdtC | - |
| PIC30_RS09925 (2079421) | 2079421..2080071 | - | 651 | WP_001007783.1 | metal-binding protein ZinT | - |
| PIC30_RS09930 (2080328) | 2080328..2080963 | - | 636 | WP_001240073.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|