MGE detailed information
MGE type: Conjugative plasmid MGE length: 98708 bp
Accession: NZ_CP116068 Location: 1..98708 Organism: Escherichia coli strain DETEC-S792 Replicon: plasmid pDETEC43
Accession: NZ_CP116068 Location: 1..98708 Organism: Escherichia coli strain DETEC-S792 Replicon: plasmid pDETEC43
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS26630 (PID00_26630) | 494..1366 | + | 873 | WP_021561185.1 | incFII family plasmid replication initiator RepA | - |
| PID00_RS26635 (PID00_26635) | 2271..2555 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PID00_RS26640 (PID00_26640) | 2555..2830 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PID00_RS26645 (PID00_26645) | 2936..3148 | + | 213 | WP_016237858.1 | hypothetical protein | - |
| PID00_RS26650 (PID00_26650) | 3380..3646 | - | 267 | WP_016237857.1 | hypothetical protein | - |
| PID00_RS26655 (PID00_26655) | 3784..4386 | - | 603 | WP_048966960.1 | ProQ/FINO family protein | - |
| PID00_RS26660 (PID00_26660) | 4740..6086 | + | 1347 | WP_001132021.1 | protein YagA | - |
| PID00_RS26665 (PID00_26665) | 6629..6931 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| PID00_RS26670 (PID00_26670) | 6928..7554 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| PID00_RS26675 (PID00_26675) | 7750..9021 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| PID00_RS26680 (PID00_26680) | 9021..9458 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PID00_RS26685 (PID00_26685) | 9455..9703 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PID00_RS26690 (PID00_26690) | 10122..11024 | + | 903 | WP_077637849.1 | DUF1281 domain-containing protein | - |
| PID00_RS26695 (PID00_26695) | 11021..11332 | + | 312 | WP_032158362.1 | hypothetical protein | - |
| PID00_RS26700 (PID00_26700) | 11408..12091 | + | 684 | WP_012881149.1 | DNA methylase | - |
| PID00_RS26705 (PID00_26705) | 12092..12313 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PID00_RS26710 (PID00_26710) | 12243..12761 | + | 519 | WP_271290624.1 | DUF1380 family protein | - |
| PID00_RS26715 (PID00_26715) | 12806..13576 | + | 771 | WP_271290622.1 | hypothetical protein | - |
| PID00_RS26720 (PID00_26720) | 13990..14415 | + | 426 | WP_001546490.1 | antirestriction protein | - |
| PID00_RS26725 (PID00_26725) | 14462..14884 | + | 423 | WP_044706628.1 | DUF1380 family protein | - |
| PID00_RS26730 (PID00_26730) | 14881..15072 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PID00_RS26735 (PID00_26735) | 16044..16274 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| PID00_RS26740 (PID00_26740) | 16326..17685 | + | 1360 | Protein_22 | DUF3560 domain-containing protein | - |
| PID00_RS26745 (PID00_26745) | 17729..18290 | + | 562 | Protein_23 | class I SAM-dependent methyltransferase | - |
| PID00_RS26750 (PID00_26750) | 18376..18802 | - | 427 | Protein_24 | hypothetical protein | - |
| PID00_RS26755 (PID00_26755) | 19104..19631 | + | 528 | WP_049082421.1 | single-stranded DNA-binding protein | - |
| PID00_RS26760 (PID00_26760) | 19688..19921 | + | 234 | WP_016237213.1 | DUF905 domain-containing protein | - |
| PID00_RS26765 (PID00_26765) | 19983..21941 | + | 1959 | WP_016238141.1 | ParB/RepB/Spo0J family partition protein | - |
| PID00_RS26770 (PID00_26770) | 21996..22430 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| PID00_RS26775 (PID00_26775) | 22427..23146 | + | 720 | WP_001681703.1 | plasmid SOS inhibition protein A | - |
| PID00_RS26780 (PID00_26780) | 23143..23559 | + | 417 | Protein_30 | hypothetical protein | - |
| PID00_RS26785 (PID00_26785) | 24287..24721 | + | 435 | WP_001681708.1 | hypothetical protein | - |
| PID00_RS26790 (PID00_26790) | 24812..25078 | + | 267 | WP_001536681.1 | hypothetical protein | - |
| PID00_RS26795 (PID00_26795) | 25143..26057 | + | 915 | WP_001681709.1 | ISNCY family transposase ISSen7 | VF |
| PID00_RS26800 (PID00_26800) | 26118..26312 | + | 195 | WP_001681710.1 | hypothetical protein | - |
| PID00_RS26805 (PID00_26805) | 26343..26594 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| PID00_RS26810 (PID00_26810) | 26628..26930 | - | 303 | WP_016232730.1 | hypothetical protein | - |
| PID00_RS26815 (PID00_26815) | 27174..28022 | + | 849 | WP_271290623.1 | DUF4942 domain-containing protein | - |
| PID00_RS26820 (PID00_26820) | 28109..28444 | - | 336 | WP_001579791.1 | hypothetical protein | - |
| PID00_RS26825 (PID00_26825) | 28677..29009 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| PID00_RS26830 (PID00_26830) | 29021..31732 | + | 2712 | WP_048967111.1 | hypothetical protein | Relaxase |
| PID00_RS26835 (PID00_26835) | 31800..32231 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| PID00_RS26840 (PID00_26840) | 32290..33507 | + | 1218 | Protein_42 | relaxase NikB | - |
| PID00_RS26845 (PID00_26845) | 33533..34105 | + | 573 | WP_000332081.1 | hypothetical protein | - |
| PID00_RS26850 (PID00_26850) | 34148..36343 | - | 2196 | WP_001681738.1 | peptidase domain-containing ABC transporter | - |
| PID00_RS26855 (PID00_26855) | 36343..37596 | - | 1254 | WP_024187055.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PID00_RS26860 (PID00_26860) | 37699..38061 | - | 363 | WP_231548139.1 | CPBP family intramembrane metalloprotease | - |
| PID00_RS26865 (PID00_26865) | 39334..39759 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PID00_RS26870 (PID00_26870) | 39756..40013 | + | 258 | Protein_48 | IS66 family transposase ISEc23 | Transposase |
| PID00_RS26875 (PID00_26875) | 40136..40609 | - | 474 | Protein_49 | IS3 family transposase IS629 | Transposase |
| PID00_RS26880 (PID00_26880) | 40699..42205 | - | 1507 | Protein_50 | group II intron reverse transcriptase/maturase | - |
| PID00_RS26885 (PID00_26885) | 42878..43616 | - | 739 | Protein_51 | IS3 family transposase IS629 | Transposase |
| PID00_RS26890 (PID00_26890) | 43712..43942 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| PID00_RS26895 (PID00_26895) | 44409..46712 | - | 2304 | WP_001681749.1 | F-type conjugative transfer protein TrbC | - |
| PID00_RS26900 (PID00_26900) | 46693..47817 | - | 1125 | WP_000152385.1 | DsbC family protein | - |
| PID00_RS26905 (PID00_26905) | 47814..49148 | - | 1335 | WP_175125408.1 | IncI1-type conjugal transfer protein TrbA | - |
| PID00_RS26910 | 49647..49745 | + | 99 | WP_001681653.1 | DinQ-like type I toxin DqlB | - |
| PID00_RS26915 (PID00_26910) | 49805..49981 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| PID00_RS26920 (PID00_26915) | 50132..50599 | - | 468 | WP_001681654.1 | thermonuclease family protein | - |
| PID00_RS26925 (PID00_26920) | 50764..51387 | + | 624 | WP_024187057.1 | helix-turn-helix domain-containing protein | - |
| PID00_RS26930 (PID00_26925) | 51585..51797 | - | 213 | WP_016238185.1 | hypothetical protein | - |
| PID00_RS26935 (PID00_26930) | 51801..52169 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| PID00_RS26940 (PID00_26935) | 52181..52372 | - | 192 | WP_024187058.1 | hypothetical protein | - |
| PID00_RS26945 (PID00_26940) | 52468..52710 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| PID00_RS26950 (PID00_26945) | 53259..53909 | - | 651 | WP_001044247.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PID00_RS26955 (PID00_26950) | 53998..56163 | - | 2166 | WP_000691810.1 | DotA/TraY family protein | - |
| PID00_RS26960 (PID00_26955) | 56238..56807 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| PID00_RS26965 (PID00_26960) | 56804..58009 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| PID00_RS26970 (PID00_26965) | 57967..58587 | - | 621 | WP_048967127.1 | hypothetical protein | - |
| PID00_RS26975 (PID00_26970) | 58587..61631 | - | 3045 | WP_048967126.1 | conjugal transfer protein | - |
| PID00_RS26980 (PID00_26975) | 61807..62190 | - | 384 | WP_224471648.1 | hypothetical protein | - |
| PID00_RS26985 (PID00_26980) | 62187..62546 | - | 360 | WP_021529222.1 | hypothetical protein | - |
| PID00_RS26990 (PID00_26985) | 62601..63419 | - | 819 | WP_072153728.1 | conjugal transfer protein TraT | - |
| PID00_RS26995 (PID00_26990) | 63334..63585 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| PID00_RS27000 (PID00_26995) | 63642..64040 | - | 399 | WP_012605175.1 | hypothetical protein | - |
| PID00_RS27005 (PID00_27000) | 64088..64618 | - | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| PID00_RS27010 (PID00_27005) | 64615..65328 | - | 714 | WP_012605176.1 | conjugal transfer protein TraP | - |
| PID00_RS27015 (PID00_27010) | 65325..66662 | - | 1338 | WP_048967125.1 | conjugal transfer protein TraO | - |
| PID00_RS27020 (PID00_27015) | 66666..67640 | - | 975 | WP_001681667.1 | hypothetical protein | VF |
| PID00_RS27025 (PID00_27020) | 67651..68346 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| PID00_RS27030 (PID00_27025) | 68358..68708 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| PID00_RS27035 (PID00_27030) | 68725..72786 | - | 4062 | WP_001681671.1 | DUF5710 domain-containing protein | - |
| PID00_RS27040 (PID00_27035) | 72850..73140 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| PID00_RS27045 (PID00_27040) | 73137..74285 | - | 1149 | WP_021565170.1 | putative protein YggR | VF |
| PID00_RS27050 (PID00_27045) | 74269..75105 | - | 837 | WP_012605182.1 | hypothetical protein | VF |
| PID00_RS27055 (PID00_27050) | 75102..75560 | - | 459 | WP_048967124.1 | DotD/TraH family lipoprotein | - |
| PID00_RS27060 (PID00_27055) | 75664..76866 | - | 1203 | WP_032325924.1 | conjugal transfer protein TraF | - |
| PID00_RS27065 (PID00_27060) | 76968..77789 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| PID00_RS27070 (PID00_27065) | 78051..78389 | + | 339 | WP_001681677.1 | hypothetical protein | - |
| PID00_RS27075 (PID00_27070) | 78676..79800 | - | 1125 | WP_016237240.1 | site-specific integrase | - |
| PID00_RS27080 (PID00_27075) | 80127..81500 | - | 1374 | WP_096955011.1 | hypothetical protein | VF |
| PID00_RS27085 (PID00_27080) | 81497..82204 | - | 708 | WP_001114349.1 | A24 family peptidase | - |
| PID00_RS27090 (PID00_27085) | 82164..82646 | - | 483 | WP_048967178.1 | hypothetical protein | VF |
| PID00_RS27095 (PID00_27090) | 82694..83230 | - | 537 | WP_001011500.1 | type 4 pilus major pilin | - |
| PID00_RS27100 (PID00_27095) | 83280..84380 | - | 1101 | WP_001211427.1 | hypothetical protein | VF |
| PID00_RS27105 (PID00_27100) | 84382..85890 | - | 1509 | WP_108451519.1 | hypothetical protein | VF |
| PID00_RS27110 (PID00_27105) | 86081..86332 | + | 252 | WP_001681796.1 | hypothetical protein | Antitoxin Detail |
| PID00_RS27115 (PID00_27110) | 86322..86603 | + | 282 | WP_001681795.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PID00_RS27120 (PID00_27115) | 86913..87365 | - | 453 | WP_001681794.1 | hypothetical protein | VF |
| PID00_RS27125 (PID00_27120) | 87355..88650 | - | 1296 | WP_001681793.1 | type 4b pilus protein PilO2 | - |
| PID00_RS27130 (PID00_27125) | 88671..90290 | - | 1620 | WP_001681792.1 | Outer membrane lipoprotein BfpB | VF |
| PID00_RS27135 (PID00_27130) | 90321..90758 | - | 438 | WP_001681791.1 | type IV pilus biogenesis protein PilM | - |
| PID00_RS27140 (PID00_27135) | 90763..91830 | - | 1068 | WP_001681790.1 | hypothetical protein | VF |
| PID00_RS27145 (PID00_27140) | 91949..92377 | + | 429 | WP_016237239.1 | hypothetical protein | - |
| PID00_RS27150 (PID00_27145) | 92367..93254 | - | 888 | WP_032181980.1 | hypothetical protein | - |
| PID00_RS27155 (PID00_27150) | 93662..94009 | - | 348 | WP_001681787.1 | hypothetical protein | - |
| PID00_RS27160 (PID00_27155) | 94126..94368 | - | 243 | WP_001681786.1 | PilI type IV pilus biogenesis protein | - |
| PID00_RS27165 (PID00_27160) | 94449..96143 | - | 1695 | WP_001681785.1 | flotillin family protein | - |
| PID00_RS27170 (PID00_27165) | 96170..96790 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| PID00_RS27175 (PID00_27170) | 97057..97719 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| PID00_RS27180 (PID00_27175) | 97859..98365 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|