Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-DnaT |
| Location | 86081..86603 | Replicon | plasmid pDETEC43 |
| Accession | NZ_CP116068 | ||
| Organism | Escherichia coli strain DETEC-S792 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | S1PVW2 |
| Locus tag | PID00_RS27115 | Protein ID | WP_001681795.1 |
| Coordinates | 86322..86603 (+) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | S1Q9V6 |
| Locus tag | PID00_RS27110 | Protein ID | WP_001681796.1 |
| Coordinates | 86081..86332 (+) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS27085 (PID00_27080) | 81497..82204 | - | 708 | WP_001114349.1 | A24 family peptidase | - |
| PID00_RS27090 (PID00_27085) | 82164..82646 | - | 483 | WP_048967178.1 | lytic transglycosylase domain-containing protein | - |
| PID00_RS27095 (PID00_27090) | 82694..83230 | - | 537 | WP_001011500.1 | type 4 pilus major pilin | - |
| PID00_RS27100 (PID00_27095) | 83280..84380 | - | 1101 | WP_001211427.1 | type II secretion system F family protein | - |
| PID00_RS27105 (PID00_27100) | 84382..85890 | - | 1509 | WP_108451519.1 | ATPase, T2SS/T4P/T4SS family | - |
| PID00_RS27110 (PID00_27105) | 86081..86332 | + | 252 | WP_001681796.1 | hypothetical protein | Antitoxin |
| PID00_RS27115 (PID00_27110) | 86322..86603 | + | 282 | WP_001681795.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| PID00_RS27120 (PID00_27115) | 86913..87365 | - | 453 | WP_001681794.1 | type IV pilus biogenesis protein PilP | - |
| PID00_RS27125 (PID00_27120) | 87355..88650 | - | 1296 | WP_001681793.1 | type 4b pilus protein PilO2 | - |
| PID00_RS27130 (PID00_27125) | 88671..90290 | - | 1620 | WP_001681792.1 | PilN family type IVB pilus formation outer membrane protein | - |
| PID00_RS27135 (PID00_27130) | 90321..90758 | - | 438 | WP_001681791.1 | type IV pilus biogenesis protein PilM | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Conjugative plasmid | - | - | 1..98708 | 98708 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|