MGE detailed information
MGE type: Genomic_island MGE length: 12382 bp
Accession: NZ_CP116046 Location: 3411948..3424329 Organism: Escherichia coli strain EC812A1 Replicon: chromosome
Accession: NZ_CP116046 Location: 3411948..3424329 Organism: Escherichia coli strain EC812A1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIH14_RS16445 (3408355) | 3408355..3409074 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| PIH14_RS16450 (3409071) | 3409071..3410702 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PIH14_RS16455 (3410883) | 3410883..3411113 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIH14_RS16460 (3411125) | 3411125..3411397 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| PIH14_RS16465 (3411624) | 3411624..3411920 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| PIH14_RS16470 (3411948) | 3411948..3412121 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| PIH14_RS16475 (3412240) | 3412240..3413757 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| PIH14_RS16480 (3413994) | 3413994..3415451 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| PIH14_RS16485 (3415510) | 3415510..3417657 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PIH14_RS16490 (3417737) | 3417737..3419071 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIH14_RS16495 (3419436) | 3419436..3420974 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIH14_RS16500 (3421723) | 3421723..3422076 | - | 354 | WP_071685956.1 | DUF5983 family protein | - |
| PIH14_RS16505 (3422073) | 3422073..3422447 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIH14_RS16510 (3422537) | 3422537..3422905 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PIH14_RS16515 (3423068) | 3423068..3423289 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PIH14_RS16520 (3423352) | 3423352..3423828 | - | 477 | WP_001186770.1 | RadC family protein | - |
| PIH14_RS16525 (3423844) | 3423844..3424329 | - | 486 | WP_000849576.1 | antirestriction protein | - |
| PIH14_RS16530 (3424384) | 3424384..3425202 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| PIH14_RS16535 (3425302) | 3425302..3425535 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| PIH14_RS16540 (3425614) | 3425614..3426069 | - | 456 | WP_000581504.1 | IrmA family protein | - |
| PIH14_RS16545 (3426145) | 3426145..3428661 | - | 2517 | WP_001348608.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |