MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP116042 Location: 2464360..2476445 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 Replicon: chromosome
Accession: NZ_CP116042 Location: 2464360..2476445 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGC28_RS12140 (2460281) | 2460281..2461483 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PGC28_RS12145 (2461496) | 2461496..2462947 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PGC28_RS12150 (2463091) | 2463091..2464098 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PGC28_RS12155 (2464357) | 2464357..2465823 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PGC28_RS12160 (2466631) | 2466631..2467345 | + | 715 | Protein_2379 | helix-turn-helix domain-containing protein | - |
| PGC28_RS12165 (2467401) | 2467401..2468309 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PGC28_RS12170 (2468452) | 2468452..2468784 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PGC28_RS12175 (2468774) | 2468774..2468989 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PGC28_RS12180 (2469141) | 2469141..2469389 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PGC28_RS12185 (2469379) | 2469379..2469663 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PGC28_RS12190 (2469834) | 2469834..2470223 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PGC28_RS12195 (2470275) | 2470275..2471354 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PGC28_RS12200 (2471547) | 2471547..2472035 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PGC28_RS12205 (2472080) | 2472080..2473588 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PGC28_RS12210 (2473578) | 2473578..2474819 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PGC28_RS12215 (2474889) | 2474889..2476445 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PGC28_RS12220 (2476622) | 2476622..2477908 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PGC28_RS12225 (2477883) | 2477883..2478908 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PGC28_RS12230 (2478967) | 2478967..2479758 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PGC28_RS12235 (2479804) | 2479804..2480895 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |