MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82743 bp
Accession: NZ_CP116037 Location: 1..82743 Organism: Escherichia coli strain FAH Replicon: plasmid unnamed2
Accession: NZ_CP116037 Location: 1..82743 Organism: Escherichia coli strain FAH Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGH49_RS25440 (PGH49_25440) | 1..705 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PGH49_RS25445 (PGH49_25445) | 759..1366 | - | 608 | Protein_1 | IS1 family transposase | - |
| PGH49_RS25450 (PGH49_25450) | 1566..1679 | + | 114 | Protein_2 | IS6 family transposase | - |
| PGH49_RS25455 (PGH49_25455) | 1817..1987 | + | 171 | Protein_3 | DsbA family protein | - |
| PGH49_RS25460 (PGH49_25460) | 1977..2483 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| PGH49_RS25465 (PGH49_25465) | 2666..3481 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| PGH49_RS25470 (PGH49_25470) | 3828..5714 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| PGH49_RS25475 (PGH49_25475) | 5755..6282 | + | 528 | WP_000178050.1 | iron transporter | - |
| PGH49_RS25480 (PGH49_25480) | 6386..7765 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| PGH49_RS25485 (PGH49_25485) | 7768..9051 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| PGH49_RS25490 (PGH49_25490) | 9041..10171 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| PGH49_RS25495 (PGH49_25495) | 10176..10871 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PGH49_RS25500 (PGH49_25500) | 10858..11343 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| PGH49_RS25505 (PGH49_25505) | 11368..11853 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| PGH49_RS25510 (PGH49_25510) | 11975..12608 | + | 634 | Protein_14 | histidine-type phosphatase | - |
| PGH49_RS25515 (PGH49_25515) | 12758..12931 | - | 174 | Protein_15 | IS5 family transposase ISKpn26 | Transposase |
| PGH49_RS25520 (PGH49_25520) | 12932..13246 | - | 315 | Protein_16 | IS5 family transposase ISKpn26 | Transposase |
| PGH49_RS25525 (PGH49_25525) | 13919..14658 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| PGH49_RS25530 (PGH49_25530) | 14684..14989 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| PGH49_RS25535 (PGH49_25535) | 15512..16687 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| PGH49_RS25540 (PGH49_25540) | 16756..19017 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| PGH49_RS25545 (PGH49_25545) | 19186..19962 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| PGH49_RS25550 (PGH49_25550) | 19970..20845 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| PGH49_RS25555 (PGH49_25555) | 21219..21844 | - | 626 | Protein_23 | replication initiation protein | - |
| PGH49_RS25560 (PGH49_25560) | 23296..23631 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| PGH49_RS25565 (PGH49_25565) | 23760..24107 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| PGH49_RS25570 (PGH49_25570) | 24127..24636 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| PGH49_RS25575 (PGH49_25575) | 24633..24893 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| PGH49_RS25580 (PGH49_25580) | 24995..25734 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| PGH49_RS25585 (PGH49_25585) | 26407..27915 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| PGH49_RS25590 (PGH49_25590) | 27999..28337 | + | 339 | Protein_30 | IS3 family transposase IS629 | Transposase |
| PGH49_RS25595 (PGH49_25595) | 28417..28821 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| PGH49_RS25600 (PGH49_25600) | 28818..29165 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| PGH49_RS25605 (PGH49_25605) | 29214..30159 | + | 946 | Protein_33 | IS66 family transposase ISEc8 | Transposase |
| PGH49_RS25610 (PGH49_25610) | 30245..31267 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| PGH49_RS25615 (PGH49_25615) | 31264..32046 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| PGH49_RS25620 (PGH49_25620) | 32114..32722 | + | 609 | Protein_36 | IS66 family transposase ISEc22 | Transposase |
| PGH49_RS25625 (PGH49_25625) | 32785..33576 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| PGH49_RS25630 (PGH49_25630) | 33583..35553 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| PGH49_RS25635 (PGH49_25635) | 35835..36259 | + | 425 | Protein_39 | IS3 family transposase IS2 | Transposase |
| PGH49_RS25640 (PGH49_25640) | 36796..37068 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| PGH49_RS25645 (PGH49_25645) | 37514..37689 | + | 176 | Protein_41 | IS3 family transposase | - |
| PGH49_RS25650 (PGH49_25650) | 37915..39084 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| PGH49_RS25655 (PGH49_25655) | 39451..39639 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| PGH49_RS25660 (PGH49_25660) | 39760..40500 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| PGH49_RS25665 (PGH49_25665) | 40743..41720 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| PGH49_RS25670 (PGH49_25670) | 42463..42786 | + | 324 | Protein_46 | IS21 family transposase IS21 | Transposase |
| PGH49_RS25675 (PGH49_25675) | 42788..42892 | + | 105 | Protein_47 | AAA family ATPase | - |
| PGH49_RS25680 (PGH49_25680) | 42953..43466 | + | 514 | Protein_48 | DUF4113 domain-containing protein | - |
| PGH49_RS25690 (PGH49_25690) | 44646..45343 | + | 698 | WP_223155668.1 | IS1 family transposase IS1A | Transposase |
| PGH49_RS25695 (PGH49_25695) | 45597..46619 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| PGH49_RS25700 (PGH49_25700) | 46604..48169 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| PGH49_RS25705 (PGH49_25705) | 48244..48660 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PGH49_RS25710 (PGH49_25710) | 48657..48887 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PGH49_RS25715 (PGH49_25715) | 49268..53062 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| PGH49_RS25720 (PGH49_25720) | 53107..53523 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PGH49_RS25725 (PGH49_25725) | 53520..53750 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PGH49_RS25730 (PGH49_25730) | 54015..54515 | + | 501 | WP_001773886.1 | HEPN family nuclease | - |
| PGH49_RS25735 (PGH49_25735) | 54528..55301 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| PGH49_RS25740 (PGH49_25740) | 55468..56601 | + | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| PGH49_RS25745 (PGH49_25745) | 56635..57147 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| PGH49_RS25750 (PGH49_25750) | 57714..57932 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PGH49_RS25755 (PGH49_25755) | 57934..58239 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PGH49_RS25760 (PGH49_25760) | 58240..59046 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| PGH49_RS25765 (PGH49_25765) | 59820..60575 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| PGH49_RS25770 (PGH49_25770) | 61163..62329 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| PGH49_RS25775 (PGH49_25775) | 62329..63300 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PGH49_RS25780 (PGH49_25780) | 64167..65069 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| PGH49_RS25785 (PGH49_25785) | 65066..65377 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| PGH49_RS25790 (PGH49_25790) | 65454..66137 | + | 684 | WP_000086185.1 | DNA methylase | - |
| PGH49_RS25795 (PGH49_25795) | 66138..66359 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PGH49_RS25800 (PGH49_25800) | 66289..66807 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| PGH49_RS25805 (PGH49_25805) | 66858..67634 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| PGH49_RS25810 (PGH49_25810) | 68051..68476 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| PGH49_RS25815 (PGH49_25815) | 68523..68945 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| PGH49_RS25820 (PGH49_25820) | 68942..69133 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| PGH49_RS25825 (PGH49_25825) | 70168..70398 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PGH49_RS25830 (PGH49_25830) | 70450..71810 | + | 1361 | Protein_78 | DUF3560 domain-containing protein | - |
| PGH49_RS25835 (PGH49_25835) | 71858..72421 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| PGH49_RS25840 (PGH49_25840) | 72447..72653 | + | 207 | WP_001774176.1 | hypothetical protein | - |
| PGH49_RS25845 (PGH49_25845) | 72572..72823 | + | 252 | WP_071579736.1 | hypothetical protein | - |
| PGH49_RS25850 (PGH49_25850) | 73064..73270 | + | 207 | WP_000547975.1 | hypothetical protein | - |
| PGH49_RS25855 (PGH49_25855) | 73296..73835 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| PGH49_RS25860 (PGH49_25860) | 74060..74200 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| PGH49_RS25865 (PGH49_25865) | 74298..74951 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PGH49_RS25870 (PGH49_25870) | 75044..75301 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PGH49_RS25875 (PGH49_25875) | 75234..75635 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PGH49_RS25880 (PGH49_25880) | 75884..76581 | + | 698 | WP_223216377.1 | IS1 family transposase IS1R | Transposase |
| PGH49_RS25885 (PGH49_25885) | 76688..77122 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| PGH49_RS25890 (PGH49_25890) | 77194..77544 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| PGH49_RS25895 (PGH49_25895) | 77558..77833 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| PGH49_RS25900 (PGH49_25900) | 77869..78291 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| PGH49_RS25905 (PGH49_25905) | 78343..80037 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| PGH49_RS25910 (PGH49_25910) | 80055..80417 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| PGH49_RS25915 (PGH49_25915) | 80414..80650 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| PGH49_RS25920 (PGH49_25920) | 80686..81354 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| PGH49_RS25925 (PGH49_25925) | 81429..82679 | + | 1251 | Protein_97 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|