MGE detailed information
MGE type: Prophage MGE length: 61471 bp
Accession: NZ_CP116003 Location: 1676651..1738121 Organism: Edwardsiella piscicida strain CC1 Replicon: chromosome
Accession: NZ_CP116003 Location: 1676651..1738121 Organism: Edwardsiella piscicida strain CC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PED68_RS07625 (PED68_07625) | 1672176..1672448 | + | 273 | WP_015461416.1 | hypothetical protein | - |
| PED68_RS07630 (PED68_07630) | 1672809..1674023 | - | 1215 | WP_071818553.1 | DUF1028 domain-containing protein | - |
| PED68_RS07635 (PED68_07635) | 1675084..1675380 | - | 297 | WP_012848441.1 | putative quinol monooxygenase | - |
| PED68_RS07640 (PED68_07640) | 1675422..1675817 | - | 396 | WP_015461418.1 | VOC family protein | - |
| PED68_RS07645 (PED68_07645) | 1676038..1676319 | - | 282 | WP_015461419.1 | ribbon-helix-helix domain-containing protein | - |
| PED68_RS07650 (PED68_07650) | 1676651..1677061 | - | 411 | WP_071818515.1 | tyrosine-type recombinase/integrase | - |
| PED68_RS07655 (PED68_07655) | 1677330..1677500 | - | 171 | Protein_1460 | tyrosine-type recombinase/integrase | - |
| PED68_RS07660 (PED68_07660) | 1677781..1678182 | - | 402 | WP_240733388.1 | tail fiber assembly protein | - |
| PED68_RS07665 (PED68_07665) | 1678197..1678964 | - | 768 | WP_205745120.1 | hypothetical protein | - |
| PED68_RS07670 (PED68_07670) | 1678976..1679554 | - | 579 | WP_129986256.1 | DUF2313 domain-containing protein | - |
| PED68_RS07675 (PED68_07675) | 1679539..1680615 | - | 1077 | WP_280977379.1 | baseplate J/gp47 family protein | - |
| PED68_RS07680 (PED68_07680) | 1680605..1681057 | - | 453 | WP_129986252.1 | phage GP46 family protein | - |
| PED68_RS07685 (PED68_07685) | 1681054..1681596 | - | 543 | WP_129986250.1 | phage baseplate assembly protein V | - |
| PED68_RS07690 (PED68_07690) | 1681587..1682684 | - | 1098 | WP_129986248.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PED68_RS07695 (PED68_07695) | 1682684..1683952 | - | 1269 | WP_129986246.1 | DNA circularization N-terminal domain-containing protein | - |
| PED68_RS07700 (PED68_07700) | 1683952..1685721 | - | 1770 | WP_129986244.1 | phage tail tape measure protein | - |
| PED68_RS07705 (PED68_07705) | 1685820..1686203 | - | 384 | WP_129986242.1 | phage tail assembly protein | - |
| PED68_RS07710 (PED68_07710) | 1686207..1686563 | - | 357 | WP_035606028.1 | phage tail tube protein | - |
| PED68_RS07715 (PED68_07715) | 1686573..1688051 | - | 1479 | WP_129986240.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PED68_RS07720 (PED68_07720) | 1688054..1688263 | - | 210 | WP_129986238.1 | DUF2635 domain-containing protein | - |
| PED68_RS07725 (PED68_07725) | 1688260..1688862 | - | 603 | WP_129986236.1 | hypothetical protein | - |
| PED68_RS07730 (PED68_07730) | 1688859..1689401 | - | 543 | WP_129986234.1 | phage virion morphogenesis protein | - |
| PED68_RS07735 (PED68_07735) | 1689401..1689841 | - | 441 | WP_129986232.1 | DUF1320 domain-containing protein | - |
| PED68_RS07740 (PED68_07740) | 1689841..1690218 | - | 378 | WP_129986230.1 | hypothetical protein | - |
| PED68_RS07745 (PED68_07745) | 1690294..1691190 | - | 897 | WP_129986228.1 | Mu-like prophage major head subunit gpT family protein | - |
| PED68_RS07750 (PED68_07750) | 1691190..1692158 | - | 969 | WP_129986226.1 | phage protease | - |
| PED68_RS07755 (PED68_07755) | 1692369..1693208 | - | 840 | WP_129986224.1 | phage minor head protein | - |
| PED68_RS07760 (PED68_07760) | 1693201..1694775 | - | 1575 | WP_129986222.1 | DUF935 domain-containing protein | - |
| PED68_RS07765 (PED68_07765) | 1694775..1696367 | - | 1593 | WP_129986220.1 | terminase family protein | - |
| PED68_RS07770 (PED68_07770) | 1696364..1696945 | - | 582 | WP_129986218.1 | DUF3486 family protein | - |
| PED68_RS07775 (PED68_07775) | 1696935..1697210 | - | 276 | WP_129986216.1 | hypothetical protein | - |
| PED68_RS07780 (PED68_07780) | 1697213..1697500 | - | 288 | WP_129986214.1 | ArsR family transcriptional regulator | - |
| PED68_RS07785 (PED68_07785) | 1697512..1697814 | - | 303 | WP_129986212.1 | DUF2730 domain-containing protein | - |
| PED68_RS07790 (PED68_07790) | 1697795..1698025 | - | 231 | WP_129986210.1 | TraR/DksA family transcriptional regulator | - |
| PED68_RS07795 (PED68_07795) | 1698022..1698627 | - | 606 | WP_129986208.1 | hypothetical protein | - |
| PED68_RS07800 (PED68_07800) | 1698615..1699025 | - | 411 | WP_129986206.1 | hypothetical protein | - |
| PED68_RS07805 (PED68_07805) | 1699101..1699682 | - | 582 | WP_129986204.1 | glycosyl hydrolase 108 family protein | - |
| PED68_RS07810 (PED68_07810) | 1699780..1700280 | - | 501 | WP_129986202.1 | hypothetical protein | - |
| PED68_RS07815 (PED68_07815) | 1700292..1700678 | - | 387 | WP_129986200.1 | Mor transcription activator family protein | - |
| PED68_RS07820 (PED68_07820) | 1700675..1701223 | - | 549 | WP_129986198.1 | regulatory protein GemA | - |
| PED68_RS07825 (PED68_07825) | 1701213..1701713 | - | 501 | WP_205745119.1 | hypothetical protein | - |
| PED68_RS07830 (PED68_07830) | 1701796..1702320 | - | 525 | WP_129986196.1 | host-nuclease inhibitor Gam family protein | - |
| PED68_RS07835 (PED68_07835) | 1702332..1702568 | - | 237 | WP_116603314.1 | hypothetical protein | - |
| PED68_RS07840 (PED68_07840) | 1702580..1702819 | - | 240 | WP_116603315.1 | hypothetical protein | - |
| PED68_RS07845 (PED68_07845) | 1702816..1703766 | - | 951 | WP_116603316.1 | AAA family ATPase | - |
| PED68_RS07850 (PED68_07850) | 1703834..1705825 | - | 1992 | WP_129986194.1 | hypothetical protein ; Integrase | Integrase |
| PED68_RS07855 (PED68_07855) | 1705818..1706063 | - | 246 | WP_116603318.1 | helix-turn-helix domain-containing protein | - |
| PED68_RS07860 (PED68_07860) | 1706247..1706735 | + | 489 | WP_129986192.1 | helix-turn-helix transcriptional regulator | - |
| PED68_RS07865 (PED68_07865) | 1707060..1707392 | + | 333 | WP_280977417.1 | phage holin, lambda family | - |
| PED68_RS07870 (PED68_07870) | 1707395..1707946 | + | 552 | WP_129986147.1 | putative peptidoglycan-binding domain-containing protein | - |
| PED68_RS07875 (PED68_07875) | 1708127..1708909 | + | 783 | WP_240733399.1 | antA/AntB antirepressor family protein | - |
| PED68_RS07880 (PED68_07880) | 1709012..1709557 | + | 546 | WP_129986143.1 | DUF2514 family protein | - |
| PED68_RS07885 (PED68_07885) | 1709914..1710690 | + | 777 | WP_073382315.1 | hypothetical protein | - |
| PED68_RS07890 (PED68_07890) | 1710683..1712344 | + | 1662 | WP_165362063.1 | terminase | - |
| PED68_RS07895 (PED68_07895) | 1712341..1714455 | + | 2115 | WP_129986139.1 | portal protein | - |
| PED68_RS07900 (PED68_07900) | 1714528..1714809 | - | 282 | WP_069578568.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PED68_RS07905 (PED68_07905) | 1714799..1715050 | - | 252 | WP_069578569.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PED68_RS07910 (PED68_07910) | 1715328..1716329 | + | 1002 | WP_129986135.1 | hypothetical protein | - |
| PED68_RS07915 (PED68_07915) | 1716347..1717585 | + | 1239 | WP_280977425.1 | N4-gp56 family major capsid protein | - |
| PED68_RS07920 (PED68_07920) | 1717644..1718039 | + | 396 | WP_080783446.1 | hypothetical protein | - |
| PED68_RS07925 (PED68_07925) | 1718081..1718524 | + | 444 | WP_080783445.1 | hypothetical protein | - |
| PED68_RS07930 (PED68_07930) | 1718590..1719105 | + | 516 | WP_236721582.1 | hypothetical protein | - |
| PED68_RS07935 (PED68_07935) | 1719105..1719767 | + | 663 | WP_109579934.1 | hypothetical protein | - |
| PED68_RS07940 (PED68_07940) | 1719764..1721860 | + | 2097 | WP_280977432.1 | tail fiber protein | - |
| PED68_RS07945 (PED68_07945) | 1721937..1723565 | + | 1629 | WP_280977434.1 | hypothetical protein | - |
| PED68_RS07950 (PED68_07950) | 1723609..1725150 | + | 1542 | WP_129986125.1 | DUF1983 domain-containing protein | - |
| PED68_RS07955 (PED68_07955) | 1725147..1725518 | + | 372 | WP_069578582.1 | hypothetical protein | - |
| PED68_RS07960 (PED68_07960) | 1725526..1726104 | + | 579 | WP_240733386.1 | hypothetical protein | - |
| PED68_RS07965 (PED68_07965) | 1726132..1726512 | + | 381 | WP_069578585.1 | hypothetical protein | - |
| PED68_RS07970 (PED68_07970) | 1726512..1726772 | + | 261 | WP_280977439.1 | bacteriocin | - |
| PED68_RS07975 (PED68_07975) | 1726796..1728223 | + | 1428 | WP_280977441.1 | cytokinesis protein SepA | - |
| PED68_RS07980 (PED68_07980) | 1728310..1735917 | + | 7608 | WP_280977443.1 | LPD5 domain-containing protein | - |
| - | 1735992..1736102 | - | 111 | - | - | Antitoxin Detail |
| - | 1735999..1736100 | + | 102 | - | - | Toxin Detail |
| PED68_RS07985 (PED68_07985) | 1736354..1736668 | - | 315 | WP_280978108.1 | hypothetical protein | - |
| PED68_RS07990 (PED68_07990) | 1737117..1737674 | + | 558 | WP_012848483.1 | Outer membrane protein X | VF |
| PED68_RS07995 (PED68_07995) | 1737762..1738121 | + | 360 | WP_012848484.1 | YcgJ family protein | - |
| PED68_RS08000 (PED68_08000) | 1738363..1738953 | - | 591 | WP_071818517.1 | hypothetical protein | - |
| PED68_RS08005 (PED68_08005) | 1739026..1739499 | - | 474 | WP_012848486.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| PED68_RS08010 (PED68_08010) | 1739510..1739788 | - | 279 | WP_015461422.1 | DUF134 domain-containing protein | - |
| PED68_RS08015 (PED68_08015) | 1739846..1740469 | - | 624 | WP_012848489.1 | response regulator | - |
| PED68_RS08020 (PED68_08020) | 1740466..1742238 | - | 1773 | WP_012848490.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|