MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 146119 bp
Accession: NZ_CP115769 Location: 1..146119 Organism: Paracoccus sediminicola strain SCSIO 76264 Replicon: plasmid p1
Accession: NZ_CP115769 Location: 1..146119 Organism: Paracoccus sediminicola strain SCSIO 76264 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PAF18_RS15585 (PAF18_15585) | 179..1480 | + | 1302 | WP_090525738.1 | AAA family ATPase | - |
PAF18_RS15590 (PAF18_15590) | 1477..2493 | + | 1017 | WP_090525740.1 | ParB N-terminal domain-containing protein | - |
PAF18_RS15595 (PAF18_15595) | 2713..3993 | + | 1281 | WP_090525741.1 | plasmid replication protein RepC | - |
PAF18_RS15600 (PAF18_15600) | 4091..4306 | + | 216 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
PAF18_RS15605 (PAF18_15605) | 4303..4407 | + | 105 | Protein_4 | type II toxin-antitoxin system RelE/ParE family toxin | - |
PAF18_RS15610 (PAF18_15610) | 4457..4855 | + | 399 | Protein_5 | IS6 family transposase | - |
PAF18_RS15615 (PAF18_15615) | 4892..5632 | - | 741 | WP_090525270.1 | hypothetical protein | VF |
PAF18_RS15620 (PAF18_15620) | 5752..6291 | - | 540 | WP_090525268.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
PAF18_RS15625 (PAF18_15625) | 6491..7681 | - | 1191 | WP_271118197.1 | hypothetical protein | - |
PAF18_RS15630 (PAF18_15630) | 7985..8836 | + | 852 | WP_271118198.1 | arginase family protein | - |
PAF18_RS15635 (PAF18_15635) | 9040..9582 | + | 543 | WP_271118199.1 | TetR/AcrR family transcriptional regulator | - |
PAF18_RS15640 (PAF18_15640) | 9579..11093 | + | 1515 | WP_271118200.1 | MFS transporter | - |
PAF18_RS15645 (PAF18_15645) | 11413..11991 | + | 579 | WP_236737094.1 | DsbE family thiol:disulfide interchange protein | - |
PAF18_RS15650 (PAF18_15650) | 11988..12509 | + | 522 | WP_067631003.1 | TlpA disulfide reductase family protein | - |
PAF18_RS15655 (PAF18_15655) | 12598..13326 | + | 729 | WP_271118240.1 | cytochrome c biogenesis protein CcdA | - |
PAF18_RS15660 (PAF18_15660) | 13331..13945 | + | 615 | WP_067631010.1 | class I SAM-dependent methyltransferase | - |
PAF18_RS15665 (PAF18_15665) | 14057..14716 | + | 660 | WP_082849320.1 | cation transporter | - |
PAF18_RS15670 (PAF18_15670) | 14700..15947 | - | 1248 | WP_271118201.1 | cytochrome P450 | - |
PAF18_RS15675 (PAF18_15675) | 15951..16451 | - | 501 | WP_035714444.1 | Lipoprotein signal peptidase | VF |
PAF18_RS15680 (PAF18_15680) | 16448..17302 | - | 855 | WP_271118202.1 | cation transporter | - |
PAF18_RS15685 (PAF18_15685) | 17359..17703 | + | 345 | WP_035714448.1 | metalloregulator ArsR/SmtB family transcription factor | - |
PAF18_RS15690 (PAF18_15690) | 17739..17888 | + | 150 | Protein_21 | multicopper oxidase domain-containing protein | - |
PAF18_RS15695 (PAF18_15695) | 18338..19534 | - | 1197 | WP_271115968.1 | IS256 family transposase ISPso1 | Transposase |
PAF18_RS15700 (PAF18_15700) | 20231..21103 | + | 873 | WP_090525264.1 | LysR family transcriptional regulator | - |
PAF18_RS15705 (PAF18_15705) | 21236..22213 | + | 978 | WP_090525261.1 | DUF1852 domain-containing protein | - |
PAF18_RS15710 (PAF18_15710) | 22239..23279 | + | 1041 | WP_271118203.1 | methionine synthase | - |
PAF18_RS15715 (PAF18_15715) | 23276..23770 | + | 495 | WP_090525257.1 | flavin reductase family protein | - |
PAF18_RS15720 (PAF18_15720) | 23835..24746 | - | 912 | WP_090525255.1 | methylisocitrate lyase | - |
PAF18_RS15725 (PAF18_15725) | 24751..25077 | - | 327 | Protein_28 | IS3 family transposase ISAba20 | Transposase |
PAF18_RS15730 (PAF18_15730) | 25472..25813 | - | 342 | Protein_29 | IS3 family transposase ISAba20 | Transposase |
PAF18_RS15735 (PAF18_15735) | 26552..26911 | - | 360 | WP_271118204.1 | rhodanese-like domain-containing protein | - |
PAF18_RS15740 (PAF18_15740) | 26914..27813 | - | 900 | WP_271118205.1 | MBL fold metallo-hydrolase | - |
PAF18_RS15745 (PAF18_15745) | 27833..29575 | - | 1743 | WP_271118206.1 | sulfate permease | - |
PAF18_RS15750 (PAF18_15750) | 29669..31348 | - | 1680 | WP_271118207.1 | bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase | - |
PAF18_RS15755 (PAF18_15755) | 31428..31919 | - | 492 | WP_147101616.1 | bacterioferritin | - |
PAF18_RS15760 (PAF18_15760) | 31955..32836 | - | 882 | WP_271118208.1 | MBL fold metallo-hydrolase | - |
PAF18_RS15765 (PAF18_15765) | 32866..33297 | - | 432 | WP_238373319.1 | YeeE/YedE family protein | - |
PAF18_RS15770 (PAF18_15770) | 33301..33732 | - | 432 | WP_238373320.1 | YeeE/YedE family protein | - |
PAF18_RS15775 (PAF18_15775) | 33734..33949 | - | 216 | WP_238373321.1 | DUF2892 domain-containing protein | - |
PAF18_RS15780 (PAF18_15780) | 34048..34713 | - | 666 | WP_238373322.1 | Crp/Fnr family transcriptional regulator | - |
PAF18_RS15785 (PAF18_15785) | 34710..35180 | - | 471 | WP_271118209.1 | Rrf2 family transcriptional regulator | - |
PAF18_RS15790 (PAF18_15790) | 35301..35933 | + | 633 | WP_271118241.1 | peroxiredoxin | - |
PAF18_RS15795 (PAF18_15795) | 35967..36398 | + | 432 | WP_271118210.1 | hypothetical protein | - |
PAF18_RS15800 (PAF18_15800) | 36456..37904 | + | 1449 | WP_271118211.1 | cytochrome ubiquinol oxidase subunit I | - |
PAF18_RS15805 (PAF18_15805) | 37910..38941 | + | 1032 | WP_271118212.1 | cytochrome d ubiquinol oxidase subunit II | - |
PAF18_RS15810 (PAF18_15810) | 38941..39096 | + | 156 | WP_271118213.1 | hypothetical protein | - |
PAF18_RS15815 (PAF18_15815) | 39107..39700 | + | 594 | WP_271118214.1 | class I SAM-dependent methyltransferase | - |
PAF18_RS15820 (PAF18_15820) | 39814..40386 | - | 573 | WP_047998169.1 | Tn3 family transposase ISEc63 | Transposase |
PAF18_RS15825 (PAF18_15825) | 40563..40853 | - | 291 | WP_271118215.1 | hypothetical protein | - |
PAF18_RS15830 (PAF18_15830) | 40850..41746 | - | 897 | WP_091846272.1 | TniB family NTP-binding protein | - |
PAF18_RS15835 (PAF18_15835) | 41752..43413 | - | 1662 | WP_078543004.1 | IS3 family transposase ISAba20 | Transposase |
PAF18_RS15840 (PAF18_15840) | 43757..43954 | - | 198 | WP_271118216.1 | hypothetical protein | - |
PAF18_RS15845 (PAF18_15845) | 43954..44115 | - | 162 | WP_271118217.1 | hypothetical protein | - |
PAF18_RS15850 (PAF18_15850) | 44166..44585 | - | 420 | WP_271118218.1 | type II toxin-antitoxin system VapC family toxin | - |
PAF18_RS15855 (PAF18_15855) | 44585..44887 | - | 303 | WP_245727362.1 | type II toxin-antitoxin system VapB family antitoxin | - |
PAF18_RS15860 (PAF18_15860) | 44960..46156 | + | 1197 | WP_271118219.1 | DUF1173 family protein | - |
PAF18_RS15865 (PAF18_15865) | 46150..46830 | - | 681 | WP_271118220.1 | SOS response-associated peptidase | - |
PAF18_RS15870 (PAF18_15870) | 47695..50112 | - | 2418 | WP_271118221.1 | hypothetical protein | - |
PAF18_RS15875 (PAF18_15875) | 50620..54225 | - | 3606 | WP_271118222.1 | ATP-binding protein | - |
PAF18_RS15880 (PAF18_15880) | 54292..54867 | - | 576 | WP_271118223.1 | IS110 family transposase ISMno14 | Transposase |
PAF18_RS15885 (PAF18_15885) | 55726..56193 | + | 468 | WP_271118224.1 | DUF3768 domain-containing protein | - |
PAF18_RS15890 (PAF18_15890) | 56495..58366 | + | 1872 | WP_271118225.1 | ParB/RepB/Spo0J family partition protein | - |
PAF18_RS15895 (PAF18_15895) | 58656..59063 | - | 408 | WP_271073617.1 | thermonuclease family protein | - |
PAF18_RS15900 (PAF18_15900) | 59444..59647 | + | 204 | WP_090525223.1 | hypothetical protein | - |
PAF18_RS15905 (PAF18_15905) | 59739..60242 | - | 504 | WP_271118226.1 | helix-turn-helix transcriptional regulator | - |
PAF18_RS15910 (PAF18_15910) | 60339..60536 | - | 198 | WP_271118227.1 | helix-turn-helix domain-containing protein | - |
PAF18_RS15915 (PAF18_15915) | 61290..61502 | + | 213 | WP_090525218.1 | hypothetical protein | - |
PAF18_RS15920 (PAF18_15920) | 61938..62204 | + | 267 | WP_271118228.1 | hypothetical protein | - |
PAF18_RS15925 (PAF18_15925) | 62207..62410 | + | 204 | WP_271118229.1 | hypothetical protein | - |
PAF18_RS15930 (PAF18_15930) | 62410..62883 | + | 474 | WP_271118230.1 | hypothetical protein | - |
PAF18_RS15935 (PAF18_15935) | 62880..63332 | + | 453 | WP_271073543.1 | hypothetical protein | - |
PAF18_RS15940 (PAF18_15940) | 63329..64765 | + | 1437 | WP_271118231.1 | DUF4942 domain-containing protein | - |
PAF18_RS15945 (PAF18_15945) | 64843..65100 | + | 258 | WP_271118232.1 | hypothetical protein | - |
PAF18_RS15950 (PAF18_15950) | 65133..65258 | - | 126 | WP_271118233.1 | hypothetical protein | - |
PAF18_RS15955 (PAF18_15955) | 65461..65679 | + | 219 | WP_271118234.1 | glutaredoxin-like protein NrdH | - |
PAF18_RS15960 (PAF18_15960) | 66590..67489 | + | 900 | WP_271118235.1 | zincin-like metallopeptidase domain-containing protein | - |
PAF18_RS15965 (PAF18_15965) | 67512..67679 | + | 168 | WP_271118236.1 | hypothetical protein | - |
PAF18_RS15970 (PAF18_15970) | 67778..68125 | - | 348 | WP_271118237.1 | hypothetical protein | - |
PAF18_RS15975 (PAF18_15975) | 68553..69227 | - | 675 | WP_271118238.1 | hypothetical protein | - |
PAF18_RS15980 (PAF18_15980) | 69227..69943 | - | 717 | WP_271118239.1 | Protein virC1 | VF |
PAF18_RS15985 (PAF18_15985) | 70618..71163 | + | 546 | WP_176805141.1 | hypothetical protein | Relaxase |
PAF18_RS15990 (PAF18_15990) | 71160..73034 | + | 1875 | WP_090525194.1 | hypothetical protein | Relaxase |
PAF18_RS15995 (PAF18_15995) | 73113..73343 | + | 231 | WP_090525193.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
PAF18_RS16000 (PAF18_16000) | 73333..73740 | + | 408 | WP_090525191.1 | PIN domain-containing protein | Toxin Detail |
PAF18_RS16005 (PAF18_16005) | 73967..74426 | - | 460 | Protein_84 | type I restriction endonuclease subunit R | - |
PAF18_RS16010 (PAF18_16010) | 74562..74915 | - | 354 | WP_176805139.1 | PRC-barrel domain-containing protein | - |
PAF18_RS16015 (PAF18_16015) | 75027..77486 | - | 2460 | WP_090525189.1 | DNA ligase D | - |
PAF18_RS16020 (PAF18_16020) | 77487..78311 | - | 825 | WP_271118175.1 | Ku protein | - |
PAF18_RS16025 (PAF18_16025) | 78594..79790 | + | 1197 | WP_271115968.1 | IS256 family transposase ISPso1 | Transposase |
PAF18_RS16030 (PAF18_16030) | 79823..80113 | - | 291 | WP_271118176.1 | hypothetical protein | - |
PAF18_RS16035 (PAF18_16035) | 80346..82454 | + | 2109 | WP_090525183.1 | Catalase C | VF |
PAF18_RS16040 (PAF18_16040) | 82503..83744 | - | 1242 | WP_271118177.1 | cation:proton antiporter | - |
PAF18_RS16045 (PAF18_16045) | 83746..84261 | - | 516 | WP_090525274.1 | DUF421 domain-containing protein | - |
PAF18_RS16050 (PAF18_16050) | 84435..84878 | + | 444 | WP_176805137.1 | Protein SapB | VF |
PAF18_RS16055 (PAF18_16055) | 84889..85626 | + | 738 | WP_090525177.1 | Crp/Fnr family transcriptional regulator | - |
PAF18_RS16060 (PAF18_16060) | 85813..87282 | + | 1470 | WP_090525175.1 | hypothetical protein | VF |
PAF18_RS16065 (PAF18_16065) | 87279..88247 | + | 969 | WP_090525173.1 | glycosyltransferase family 2 protein | - |
PAF18_RS16070 (PAF18_16070) | 88280..89299 | + | 1020 | WP_271118178.1 | glycosyltransferase | - |
PAF18_RS16075 (PAF18_16075) | 89296..90393 | + | 1098 | WP_143025692.1 | acyl-CoA dehydrogenase family protein | - |
PAF18_RS16080 (PAF18_16080) | 90423..91094 | + | 672 | WP_271118179.1 | PIG-L deacetylase family protein | - |
PAF18_RS16085 (PAF18_16085) | 91094..91657 | + | 564 | WP_090525166.1 | SAM-dependent methyltransferase | - |
PAF18_RS16090 (PAF18_16090) | 91654..92760 | + | 1107 | WP_090525164.1 | glycosyltransferase family 2 protein | - |
PAF18_RS16095 (PAF18_16095) | 92762..93250 | + | 489 | WP_090525163.1 | DUF892 family protein | - |
PAF18_RS16100 (PAF18_16100) | 93461..93703 | + | 243 | Protein_103 | ISKra4 family transposase | - |
PAF18_RS16105 (PAF18_16105) | 93700..93849 | - | 150 | WP_176805125.1 | hypothetical protein | - |
PAF18_RS16110 (PAF18_16110) | 93997..95337 | - | 1341 | WP_271118180.1 | hypothetical protein | - |
PAF18_RS16115 (PAF18_16115) | 95559..95867 | - | 309 | WP_101754684.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
PAF18_RS16120 (PAF18_16120) | 95864..96115 | - | 252 | WP_232816719.1 | hypothetical protein | Antitoxin Detail |
PAF18_RS16125 (PAF18_16125) | 96280..96552 | + | 273 | WP_271114193.1 | hypothetical protein | - |
PAF18_RS16130 (PAF18_16130) | 96557..97177 | + | 621 | WP_101754687.1 | SOS response-associated peptidase | - |
PAF18_RS16135 (PAF18_16135) | 97826..99019 | - | 1194 | WP_252734076.1 | Acyl-CoA dehydrogenase | VF |
PAF18_RS16140 (PAF18_16140) | 99110..100765 | - | 1656 | WP_271118181.1 | electron transfer flavoprotein-ubiquinone oxidoreductase | - |
PAF18_RS16145 (PAF18_16145) | 100762..102282 | - | 1521 | WP_271114194.1 | class I adenylate-forming enzyme family protein | - |
PAF18_RS16150 (PAF18_16150) | 102279..103106 | - | 828 | WP_271114195.1 | enoyl-CoA hydratase family protein | - |
PAF18_RS16155 (PAF18_16155) | 103103..103537 | - | 435 | WP_101754691.1 | PaaI family thioesterase | - |
PAF18_RS16160 (PAF18_16160) | 103534..104532 | - | 999 | WP_101754692.1 | acyl-CoA dehydrogenase | - |
PAF18_RS16165 (PAF18_16165) | 104548..105744 | - | 1197 | WP_271071068.1 | acyl-CoA dehydrogenase family protein | - |
PAF18_RS16170 (PAF18_16170) | 105756..106931 | - | 1176 | WP_271071067.1 | acetyl-CoA C-acyltransferase | - |
PAF18_RS16175 (PAF18_16175) | 106928..109042 | - | 2115 | WP_271114196.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | - |
PAF18_RS16180 (PAF18_16180) | 109045..109845 | - | 801 | WP_271114197.1 | IclR family transcriptional regulator | - |
PAF18_RS16185 (PAF18_16185) | 109854..111191 | - | 1338 | WP_271071064.1 | TRAP transporter large permease | - |
PAF18_RS16190 (PAF18_16190) | 111193..111699 | - | 507 | WP_101500522.1 | TRAP transporter small permease | - |
PAF18_RS16195 (PAF18_16195) | 111824..112879 | - | 1056 | WP_271071062.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
PAF18_RS16200 (PAF18_16200) | 113140..114531 | + | 1392 | WP_271118182.1 | hypothetical protein | - |
PAF18_RS16205 (PAF18_16205) | 115051..115653 | + | 603 | WP_271118183.1 | Tn3 family transposase ISPsy39 | Transposase |
PAF18_RS16210 (PAF18_16210) | 116037..116450 | - | 414 | WP_271118184.1 | nuclear transport factor 2 family protein | - |
PAF18_RS16215 (PAF18_16215) | 116450..117508 | - | 1059 | WP_271118185.1 | Zinc-type alcohol dehydrogenase-like protein | VF |
PAF18_RS16220 (PAF18_16220) | 117593..118483 | + | 891 | WP_271118186.1 | LysR family transcriptional regulator | - |
PAF18_RS16225 (PAF18_16225) | 118788..119420 | - | 633 | WP_271118187.1 | tyrosine-type recombinase/integrase | - |
PAF18_RS16230 (PAF18_16230) | 119544..120104 | - | 561 | WP_271118188.1 | TetR/AcrR family transcriptional regulator | - |
PAF18_RS16235 (PAF18_16235) | 120238..120957 | + | 720 | WP_271118189.1 | SDR family oxidoreductase | - |
PAF18_RS16240 (PAF18_16240) | 121087..122058 | - | 972 | WP_271118190.1 | type IV secretory system conjugative DNA transfer family protein | - |
PAF18_RS16245 (PAF18_16245) | 122173..122448 | - | 276 | WP_218132556.1 | hypothetical protein | - |
PAF18_RS16250 (PAF18_16250) | 122468..122797 | - | 330 | WP_271118242.1 | SDR family oxidoreductase | - |
PAF18_RS16255 (PAF18_16255) | 122721..122927 | + | 207 | Protein_134 | helix-turn-helix domain-containing protein | - |
PAF18_RS16260 (PAF18_16260) | 122954..123676 | + | 723 | WP_090525117.1 | PHB depolymerase family esterase | - |
PAF18_RS16265 (PAF18_16265) | 123949..124119 | + | 171 | Protein_136 | IS481 family transposase | - |
PAF18_RS16270 (PAF18_16270) | 124117..124562 | - | 446 | Protein_137 | transposase | - |
PAF18_RS16275 (PAF18_16275) | 124652..124768 | + | 117 | Protein_138 | IS481 family transposase | - |
PAF18_RS16280 (PAF18_16280) | 124947..125255 | - | 309 | WP_090525115.1 | hypothetical protein | - |
PAF18_RS16285 (PAF18_16285) | 125255..125834 | - | 580 | Protein_140 | Tn3 family transposase ISPsy39 | Transposase |
PAF18_RS16290 (PAF18_16290) | 126281..127408 | + | 1128 | Protein_141 | IS3 family transposase ISAzs33 | Transposase |
PAF18_RS16295 (PAF18_16295) | 127712..128272 | + | 561 | WP_090525110.1 | type 1 glutamine amidotransferase domain-containing protein | - |
PAF18_RS16300 (PAF18_16300) | 128703..128992 | - | 290 | Protein_143 | IS3 family transposase IS1133 | Transposase |
PAF18_RS16305 (PAF18_16305) | 129450..130478 | - | 1029 | WP_090525767.1 | IS110 family transposase ISPko7 | Transposase |
PAF18_RS16310 (PAF18_16310) | 130643..130990 | + | 348 | WP_143025716.1 | IS66 family transposase ISUnCu14 | Transposase |
PAF18_RS16315 (PAF18_16315) | 131070..131423 | + | 354 | WP_090525691.1 | IS66 family transposase ISRel8 | Transposase |
PAF18_RS16320 (PAF18_16320) | 131478..133034 | + | 1557 | Protein_147 | IS66 family transposase ISRel8 | Transposase |
PAF18_RS16325 (PAF18_16325) | 133511..133771 | + | 261 | WP_271118243.1 | hypothetical protein | - |
PAF18_RS16330 (PAF18_16330) | 133702..133854 | - | 153 | Protein_149 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
PAF18_RS16335 (PAF18_16335) | 134040..134840 | - | 801 | WP_245727389.1 | sulfotransferase | - |
PAF18_RS16340 (PAF18_16340) | 134956..136983 | + | 2028 | WP_176805211.1 | HAD-IIB family hydrolase | - |
PAF18_RS16345 (PAF18_16345) | 136988..138220 | + | 1233 | WP_271118191.1 | glycosyltransferase | - |
PAF18_RS16350 (PAF18_16350) | 138123..139106 | + | 984 | WP_271118192.1 | glycosyltransferase | - |
PAF18_RS16355 (PAF18_16355) | 139106..140236 | + | 1131 | WP_271118193.1 | glycosyltransferase | - |
PAF18_RS16360 (PAF18_16360) | 140745..140888 | - | 144 | WP_271118194.1 | hypothetical protein | - |
PAF18_RS16365 (PAF18_16365) | 141070..141826 | - | 757 | Protein_156 | IS5 family transposase | - |
PAF18_RS16370 (PAF18_16370) | 141919..142629 | - | 711 | WP_271118195.1 | IS6 family transposase ISPpa9 | Transposase |
PAF18_RS16375 (PAF18_16375) | 142711..143727 | - | 1017 | WP_271118196.1 | DUF1403 family protein | - |
PAF18_RS16380 (PAF18_16380) | 143871..144329 | - | 459 | WP_090525735.1 | type II toxin-antitoxin system VapC family toxin | - |
PAF18_RS16385 (PAF18_16385) | 144326..144562 | - | 237 | WP_036743548.1 | hypothetical protein | - |
PAF18_RS16390 (PAF18_16390) | 144604..145653 | + | 1050 | WP_090525736.1 | tyrosine-type recombinase/integrase | - |
PAF18_RS16395 (PAF18_16395) | 145650..145943 | - | 294 | WP_090525737.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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