NZ_CP1157691..146119

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 146119 bp
Accession: NZ_CP115769        Location: 1..146119         Organism: Paracoccus sediminicola strain SCSIO 76264       Replicon: plasmid p1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PAF18_RS15585 (PAF18_15585) 179..1480 + 1302 WP_090525738.1 AAA family ATPase -
PAF18_RS15590 (PAF18_15590) 1477..2493 + 1017 WP_090525740.1 ParB N-terminal domain-containing protein -
PAF18_RS15595 (PAF18_15595) 2713..3993 + 1281 WP_090525741.1 plasmid replication protein RepC -
PAF18_RS15600 (PAF18_15600) 4091..4306 + 216 Protein_3 type II toxin-antitoxin system ParD family antitoxin -
PAF18_RS15605 (PAF18_15605) 4303..4407 + 105 Protein_4 type II toxin-antitoxin system RelE/ParE family toxin -
PAF18_RS15610 (PAF18_15610) 4457..4855 + 399 Protein_5 IS6 family transposase -
PAF18_RS15615 (PAF18_15615) 4892..5632 - 741 WP_090525270.1 hypothetical protein VF
PAF18_RS15620 (PAF18_15620) 5752..6291 - 540 WP_090525268.1 Tn3 family transposase TnpR_ISAzs17 Transposase
PAF18_RS15625 (PAF18_15625) 6491..7681 - 1191 WP_271118197.1 hypothetical protein -
PAF18_RS15630 (PAF18_15630) 7985..8836 + 852 WP_271118198.1 arginase family protein -
PAF18_RS15635 (PAF18_15635) 9040..9582 + 543 WP_271118199.1 TetR/AcrR family transcriptional regulator -
PAF18_RS15640 (PAF18_15640) 9579..11093 + 1515 WP_271118200.1 MFS transporter -
PAF18_RS15645 (PAF18_15645) 11413..11991 + 579 WP_236737094.1 DsbE family thiol:disulfide interchange protein -
PAF18_RS15650 (PAF18_15650) 11988..12509 + 522 WP_067631003.1 TlpA disulfide reductase family protein -
PAF18_RS15655 (PAF18_15655) 12598..13326 + 729 WP_271118240.1 cytochrome c biogenesis protein CcdA -
PAF18_RS15660 (PAF18_15660) 13331..13945 + 615 WP_067631010.1 class I SAM-dependent methyltransferase -
PAF18_RS15665 (PAF18_15665) 14057..14716 + 660 WP_082849320.1 cation transporter -
PAF18_RS15670 (PAF18_15670) 14700..15947 - 1248 WP_271118201.1 cytochrome P450 -
PAF18_RS15675 (PAF18_15675) 15951..16451 - 501 WP_035714444.1 Lipoprotein signal peptidase VF
PAF18_RS15680 (PAF18_15680) 16448..17302 - 855 WP_271118202.1 cation transporter -
PAF18_RS15685 (PAF18_15685) 17359..17703 + 345 WP_035714448.1 metalloregulator ArsR/SmtB family transcription factor -
PAF18_RS15690 (PAF18_15690) 17739..17888 + 150 Protein_21 multicopper oxidase domain-containing protein -
PAF18_RS15695 (PAF18_15695) 18338..19534 - 1197 WP_271115968.1 IS256 family transposase ISPso1 Transposase
PAF18_RS15700 (PAF18_15700) 20231..21103 + 873 WP_090525264.1 LysR family transcriptional regulator -
PAF18_RS15705 (PAF18_15705) 21236..22213 + 978 WP_090525261.1 DUF1852 domain-containing protein -
PAF18_RS15710 (PAF18_15710) 22239..23279 + 1041 WP_271118203.1 methionine synthase -
PAF18_RS15715 (PAF18_15715) 23276..23770 + 495 WP_090525257.1 flavin reductase family protein -
PAF18_RS15720 (PAF18_15720) 23835..24746 - 912 WP_090525255.1 methylisocitrate lyase -
PAF18_RS15725 (PAF18_15725) 24751..25077 - 327 Protein_28 IS3 family transposase ISAba20 Transposase
PAF18_RS15730 (PAF18_15730) 25472..25813 - 342 Protein_29 IS3 family transposase ISAba20 Transposase
PAF18_RS15735 (PAF18_15735) 26552..26911 - 360 WP_271118204.1 rhodanese-like domain-containing protein -
PAF18_RS15740 (PAF18_15740) 26914..27813 - 900 WP_271118205.1 MBL fold metallo-hydrolase -
PAF18_RS15745 (PAF18_15745) 27833..29575 - 1743 WP_271118206.1 sulfate permease -
PAF18_RS15750 (PAF18_15750) 29669..31348 - 1680 WP_271118207.1 bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase -
PAF18_RS15755 (PAF18_15755) 31428..31919 - 492 WP_147101616.1 bacterioferritin -
PAF18_RS15760 (PAF18_15760) 31955..32836 - 882 WP_271118208.1 MBL fold metallo-hydrolase -
PAF18_RS15765 (PAF18_15765) 32866..33297 - 432 WP_238373319.1 YeeE/YedE family protein -
PAF18_RS15770 (PAF18_15770) 33301..33732 - 432 WP_238373320.1 YeeE/YedE family protein -
PAF18_RS15775 (PAF18_15775) 33734..33949 - 216 WP_238373321.1 DUF2892 domain-containing protein -
PAF18_RS15780 (PAF18_15780) 34048..34713 - 666 WP_238373322.1 Crp/Fnr family transcriptional regulator -
PAF18_RS15785 (PAF18_15785) 34710..35180 - 471 WP_271118209.1 Rrf2 family transcriptional regulator -
PAF18_RS15790 (PAF18_15790) 35301..35933 + 633 WP_271118241.1 peroxiredoxin -
PAF18_RS15795 (PAF18_15795) 35967..36398 + 432 WP_271118210.1 hypothetical protein -
PAF18_RS15800 (PAF18_15800) 36456..37904 + 1449 WP_271118211.1 cytochrome ubiquinol oxidase subunit I -
PAF18_RS15805 (PAF18_15805) 37910..38941 + 1032 WP_271118212.1 cytochrome d ubiquinol oxidase subunit II -
PAF18_RS15810 (PAF18_15810) 38941..39096 + 156 WP_271118213.1 hypothetical protein -
PAF18_RS15815 (PAF18_15815) 39107..39700 + 594 WP_271118214.1 class I SAM-dependent methyltransferase -
PAF18_RS15820 (PAF18_15820) 39814..40386 - 573 WP_047998169.1 Tn3 family transposase ISEc63 Transposase
PAF18_RS15825 (PAF18_15825) 40563..40853 - 291 WP_271118215.1 hypothetical protein -
PAF18_RS15830 (PAF18_15830) 40850..41746 - 897 WP_091846272.1 TniB family NTP-binding protein -
PAF18_RS15835 (PAF18_15835) 41752..43413 - 1662 WP_078543004.1 IS3 family transposase ISAba20 Transposase
PAF18_RS15840 (PAF18_15840) 43757..43954 - 198 WP_271118216.1 hypothetical protein -
PAF18_RS15845 (PAF18_15845) 43954..44115 - 162 WP_271118217.1 hypothetical protein -
PAF18_RS15850 (PAF18_15850) 44166..44585 - 420 WP_271118218.1 type II toxin-antitoxin system VapC family toxin -
PAF18_RS15855 (PAF18_15855) 44585..44887 - 303 WP_245727362.1 type II toxin-antitoxin system VapB family antitoxin -
PAF18_RS15860 (PAF18_15860) 44960..46156 + 1197 WP_271118219.1 DUF1173 family protein -
PAF18_RS15865 (PAF18_15865) 46150..46830 - 681 WP_271118220.1 SOS response-associated peptidase -
PAF18_RS15870 (PAF18_15870) 47695..50112 - 2418 WP_271118221.1 hypothetical protein -
PAF18_RS15875 (PAF18_15875) 50620..54225 - 3606 WP_271118222.1 ATP-binding protein -
PAF18_RS15880 (PAF18_15880) 54292..54867 - 576 WP_271118223.1 IS110 family transposase ISMno14 Transposase
PAF18_RS15885 (PAF18_15885) 55726..56193 + 468 WP_271118224.1 DUF3768 domain-containing protein -
PAF18_RS15890 (PAF18_15890) 56495..58366 + 1872 WP_271118225.1 ParB/RepB/Spo0J family partition protein -
PAF18_RS15895 (PAF18_15895) 58656..59063 - 408 WP_271073617.1 thermonuclease family protein -
PAF18_RS15900 (PAF18_15900) 59444..59647 + 204 WP_090525223.1 hypothetical protein -
PAF18_RS15905 (PAF18_15905) 59739..60242 - 504 WP_271118226.1 helix-turn-helix transcriptional regulator -
PAF18_RS15910 (PAF18_15910) 60339..60536 - 198 WP_271118227.1 helix-turn-helix domain-containing protein -
PAF18_RS15915 (PAF18_15915) 61290..61502 + 213 WP_090525218.1 hypothetical protein -
PAF18_RS15920 (PAF18_15920) 61938..62204 + 267 WP_271118228.1 hypothetical protein -
PAF18_RS15925 (PAF18_15925) 62207..62410 + 204 WP_271118229.1 hypothetical protein -
PAF18_RS15930 (PAF18_15930) 62410..62883 + 474 WP_271118230.1 hypothetical protein -
PAF18_RS15935 (PAF18_15935) 62880..63332 + 453 WP_271073543.1 hypothetical protein -
PAF18_RS15940 (PAF18_15940) 63329..64765 + 1437 WP_271118231.1 DUF4942 domain-containing protein -
PAF18_RS15945 (PAF18_15945) 64843..65100 + 258 WP_271118232.1 hypothetical protein -
PAF18_RS15950 (PAF18_15950) 65133..65258 - 126 WP_271118233.1 hypothetical protein -
PAF18_RS15955 (PAF18_15955) 65461..65679 + 219 WP_271118234.1 glutaredoxin-like protein NrdH -
PAF18_RS15960 (PAF18_15960) 66590..67489 + 900 WP_271118235.1 zincin-like metallopeptidase domain-containing protein -
PAF18_RS15965 (PAF18_15965) 67512..67679 + 168 WP_271118236.1 hypothetical protein -
PAF18_RS15970 (PAF18_15970) 67778..68125 - 348 WP_271118237.1 hypothetical protein -
PAF18_RS15975 (PAF18_15975) 68553..69227 - 675 WP_271118238.1 hypothetical protein -
PAF18_RS15980 (PAF18_15980) 69227..69943 - 717 WP_271118239.1 Protein virC1 VF
PAF18_RS15985 (PAF18_15985) 70618..71163 + 546 WP_176805141.1 hypothetical protein Relaxase
PAF18_RS15990 (PAF18_15990) 71160..73034 + 1875 WP_090525194.1 hypothetical protein Relaxase
PAF18_RS15995 (PAF18_15995) 73113..73343 + 231 WP_090525193.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
PAF18_RS16000 (PAF18_16000) 73333..73740 + 408 WP_090525191.1 PIN domain-containing protein Toxin Detail
PAF18_RS16005 (PAF18_16005) 73967..74426 - 460 Protein_84 type I restriction endonuclease subunit R -
PAF18_RS16010 (PAF18_16010) 74562..74915 - 354 WP_176805139.1 PRC-barrel domain-containing protein -
PAF18_RS16015 (PAF18_16015) 75027..77486 - 2460 WP_090525189.1 DNA ligase D -
PAF18_RS16020 (PAF18_16020) 77487..78311 - 825 WP_271118175.1 Ku protein -
PAF18_RS16025 (PAF18_16025) 78594..79790 + 1197 WP_271115968.1 IS256 family transposase ISPso1 Transposase
PAF18_RS16030 (PAF18_16030) 79823..80113 - 291 WP_271118176.1 hypothetical protein -
PAF18_RS16035 (PAF18_16035) 80346..82454 + 2109 WP_090525183.1 Catalase C VF
PAF18_RS16040 (PAF18_16040) 82503..83744 - 1242 WP_271118177.1 cation:proton antiporter -
PAF18_RS16045 (PAF18_16045) 83746..84261 - 516 WP_090525274.1 DUF421 domain-containing protein -
PAF18_RS16050 (PAF18_16050) 84435..84878 + 444 WP_176805137.1 Protein SapB VF
PAF18_RS16055 (PAF18_16055) 84889..85626 + 738 WP_090525177.1 Crp/Fnr family transcriptional regulator -
PAF18_RS16060 (PAF18_16060) 85813..87282 + 1470 WP_090525175.1 hypothetical protein VF
PAF18_RS16065 (PAF18_16065) 87279..88247 + 969 WP_090525173.1 glycosyltransferase family 2 protein -
PAF18_RS16070 (PAF18_16070) 88280..89299 + 1020 WP_271118178.1 glycosyltransferase -
PAF18_RS16075 (PAF18_16075) 89296..90393 + 1098 WP_143025692.1 acyl-CoA dehydrogenase family protein -
PAF18_RS16080 (PAF18_16080) 90423..91094 + 672 WP_271118179.1 PIG-L deacetylase family protein -
PAF18_RS16085 (PAF18_16085) 91094..91657 + 564 WP_090525166.1 SAM-dependent methyltransferase -
PAF18_RS16090 (PAF18_16090) 91654..92760 + 1107 WP_090525164.1 glycosyltransferase family 2 protein -
PAF18_RS16095 (PAF18_16095) 92762..93250 + 489 WP_090525163.1 DUF892 family protein -
PAF18_RS16100 (PAF18_16100) 93461..93703 + 243 Protein_103 ISKra4 family transposase -
PAF18_RS16105 (PAF18_16105) 93700..93849 - 150 WP_176805125.1 hypothetical protein -
PAF18_RS16110 (PAF18_16110) 93997..95337 - 1341 WP_271118180.1 hypothetical protein -
PAF18_RS16115 (PAF18_16115) 95559..95867 - 309 WP_101754684.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
PAF18_RS16120 (PAF18_16120) 95864..96115 - 252 WP_232816719.1 hypothetical protein Antitoxin Detail
PAF18_RS16125 (PAF18_16125) 96280..96552 + 273 WP_271114193.1 hypothetical protein -
PAF18_RS16130 (PAF18_16130) 96557..97177 + 621 WP_101754687.1 SOS response-associated peptidase -
PAF18_RS16135 (PAF18_16135) 97826..99019 - 1194 WP_252734076.1 Acyl-CoA dehydrogenase VF
PAF18_RS16140 (PAF18_16140) 99110..100765 - 1656 WP_271118181.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
PAF18_RS16145 (PAF18_16145) 100762..102282 - 1521 WP_271114194.1 class I adenylate-forming enzyme family protein -
PAF18_RS16150 (PAF18_16150) 102279..103106 - 828 WP_271114195.1 enoyl-CoA hydratase family protein -
PAF18_RS16155 (PAF18_16155) 103103..103537 - 435 WP_101754691.1 PaaI family thioesterase -
PAF18_RS16160 (PAF18_16160) 103534..104532 - 999 WP_101754692.1 acyl-CoA dehydrogenase -
PAF18_RS16165 (PAF18_16165) 104548..105744 - 1197 WP_271071068.1 acyl-CoA dehydrogenase family protein -
PAF18_RS16170 (PAF18_16170) 105756..106931 - 1176 WP_271071067.1 acetyl-CoA C-acyltransferase -
PAF18_RS16175 (PAF18_16175) 106928..109042 - 2115 WP_271114196.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein -
PAF18_RS16180 (PAF18_16180) 109045..109845 - 801 WP_271114197.1 IclR family transcriptional regulator -
PAF18_RS16185 (PAF18_16185) 109854..111191 - 1338 WP_271071064.1 TRAP transporter large permease -
PAF18_RS16190 (PAF18_16190) 111193..111699 - 507 WP_101500522.1 TRAP transporter small permease -
PAF18_RS16195 (PAF18_16195) 111824..112879 - 1056 WP_271071062.1 C4-dicarboxylate TRAP transporter substrate-binding protein -
PAF18_RS16200 (PAF18_16200) 113140..114531 + 1392 WP_271118182.1 hypothetical protein -
PAF18_RS16205 (PAF18_16205) 115051..115653 + 603 WP_271118183.1 Tn3 family transposase ISPsy39 Transposase
PAF18_RS16210 (PAF18_16210) 116037..116450 - 414 WP_271118184.1 nuclear transport factor 2 family protein -
PAF18_RS16215 (PAF18_16215) 116450..117508 - 1059 WP_271118185.1 Zinc-type alcohol dehydrogenase-like protein VF
PAF18_RS16220 (PAF18_16220) 117593..118483 + 891 WP_271118186.1 LysR family transcriptional regulator -
PAF18_RS16225 (PAF18_16225) 118788..119420 - 633 WP_271118187.1 tyrosine-type recombinase/integrase -
PAF18_RS16230 (PAF18_16230) 119544..120104 - 561 WP_271118188.1 TetR/AcrR family transcriptional regulator -
PAF18_RS16235 (PAF18_16235) 120238..120957 + 720 WP_271118189.1 SDR family oxidoreductase -
PAF18_RS16240 (PAF18_16240) 121087..122058 - 972 WP_271118190.1 type IV secretory system conjugative DNA transfer family protein -
PAF18_RS16245 (PAF18_16245) 122173..122448 - 276 WP_218132556.1 hypothetical protein -
PAF18_RS16250 (PAF18_16250) 122468..122797 - 330 WP_271118242.1 SDR family oxidoreductase -
PAF18_RS16255 (PAF18_16255) 122721..122927 + 207 Protein_134 helix-turn-helix domain-containing protein -
PAF18_RS16260 (PAF18_16260) 122954..123676 + 723 WP_090525117.1 PHB depolymerase family esterase -
PAF18_RS16265 (PAF18_16265) 123949..124119 + 171 Protein_136 IS481 family transposase -
PAF18_RS16270 (PAF18_16270) 124117..124562 - 446 Protein_137 transposase -
PAF18_RS16275 (PAF18_16275) 124652..124768 + 117 Protein_138 IS481 family transposase -
PAF18_RS16280 (PAF18_16280) 124947..125255 - 309 WP_090525115.1 hypothetical protein -
PAF18_RS16285 (PAF18_16285) 125255..125834 - 580 Protein_140 Tn3 family transposase ISPsy39 Transposase
PAF18_RS16290 (PAF18_16290) 126281..127408 + 1128 Protein_141 IS3 family transposase ISAzs33 Transposase
PAF18_RS16295 (PAF18_16295) 127712..128272 + 561 WP_090525110.1 type 1 glutamine amidotransferase domain-containing protein -
PAF18_RS16300 (PAF18_16300) 128703..128992 - 290 Protein_143 IS3 family transposase IS1133 Transposase
PAF18_RS16305 (PAF18_16305) 129450..130478 - 1029 WP_090525767.1 IS110 family transposase ISPko7 Transposase
PAF18_RS16310 (PAF18_16310) 130643..130990 + 348 WP_143025716.1 IS66 family transposase ISUnCu14 Transposase
PAF18_RS16315 (PAF18_16315) 131070..131423 + 354 WP_090525691.1 IS66 family transposase ISRel8 Transposase
PAF18_RS16320 (PAF18_16320) 131478..133034 + 1557 Protein_147 IS66 family transposase ISRel8 Transposase
PAF18_RS16325 (PAF18_16325) 133511..133771 + 261 WP_271118243.1 hypothetical protein -
PAF18_RS16330 (PAF18_16330) 133702..133854 - 153 Protein_149 Tn3 family transposase TnpR_ISRsp12 Transposase
PAF18_RS16335 (PAF18_16335) 134040..134840 - 801 WP_245727389.1 sulfotransferase -
PAF18_RS16340 (PAF18_16340) 134956..136983 + 2028 WP_176805211.1 HAD-IIB family hydrolase -
PAF18_RS16345 (PAF18_16345) 136988..138220 + 1233 WP_271118191.1 glycosyltransferase -
PAF18_RS16350 (PAF18_16350) 138123..139106 + 984 WP_271118192.1 glycosyltransferase -
PAF18_RS16355 (PAF18_16355) 139106..140236 + 1131 WP_271118193.1 glycosyltransferase -
PAF18_RS16360 (PAF18_16360) 140745..140888 - 144 WP_271118194.1 hypothetical protein -
PAF18_RS16365 (PAF18_16365) 141070..141826 - 757 Protein_156 IS5 family transposase -
PAF18_RS16370 (PAF18_16370) 141919..142629 - 711 WP_271118195.1 IS6 family transposase ISPpa9 Transposase
PAF18_RS16375 (PAF18_16375) 142711..143727 - 1017 WP_271118196.1 DUF1403 family protein -
PAF18_RS16380 (PAF18_16380) 143871..144329 - 459 WP_090525735.1 type II toxin-antitoxin system VapC family toxin -
PAF18_RS16385 (PAF18_16385) 144326..144562 - 237 WP_036743548.1 hypothetical protein -
PAF18_RS16390 (PAF18_16390) 144604..145653 + 1050 WP_090525736.1 tyrosine-type recombinase/integrase -
PAF18_RS16395 (PAF18_16395) 145650..145943 - 294 WP_090525737.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance