MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP115447 Location: 3800695..3805637 Organism: Mycobacterium tuberculosis strain BLR 9248 2019 Replicon: chromosome
Accession: NZ_CP115447 Location: 3800695..3805637 Organism: Mycobacterium tuberculosis strain BLR 9248 2019 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAK35_RS17820 (PAK35_17820) | 3796530..3797420 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| PAK35_RS17825 (PAK35_17825) | 3797429..3799267 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| PAK35_RS17830 (PAK35_17830) | 3799264..3800253 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| PAK35_RS17835 (PAK35_17835) | 3800253..3800642 | - | 390 | Protein_3523 | polyprenyl synthetase family protein | - |
| PAK35_RS17840 (PAK35_17840) | 3800695..3801956 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| PAK35_RS17845 (PAK35_17845) | 3801998..3802663 | - | 666 | Protein_3525 | polyprenyl synthetase family protein | - |
| PAK35_RS17850 (PAK35_17850) | 3803417..3803809 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PAK35_RS17855 (PAK35_17855) | 3803809..3804084 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PAK35_RS17860 (PAK35_17860) | 3804266..3805637 | + | 1372 | Protein_3528 | ISNCY family transposase ISRjo3 | Transposase |
| PAK35_RS17865 (PAK35_17865) | 3805827..3808004 | + | 2178 | WP_016330440.1 | PE family protein | - |
| PAK35_RS17870 (PAK35_17870) | 3808075..3808947 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| PAK35_RS17875 (PAK35_17875) | 3809021..3809731 | + | 711 | WP_003417932.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |