MGE detailed information
MGE type: Genomic_island MGE length: 41753 bp
Accession: NZ_CP115182 Location: 1382748..1424500 Organism: Diaphorobacter sp. ED-3 Replicon: chromosome
Accession: NZ_CP115182 Location: 1382748..1424500 Organism: Diaphorobacter sp. ED-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCQ86_RS06700 | 1380538..1382481 | + | 1944 | WP_009516244.1 | integrase arm-type DNA-binding domain-containing protein | - |
| PCQ86_RS06705 | 1382545..1382880 | - | 336 | WP_231403488.1 | isochorismatase family protein | - |
| PCQ86_RS06710 | 1382901..1383023 | - | 123 | Protein_1324 | cysteine hydrolase | - |
| PCQ86_RS06715 | 1383285..1384274 | + | 990 | WP_009516242.1 | DJ-1/PfpI family protein | - |
| PCQ86_RS06720 | 1384299..1384934 | - | 636 | WP_035624309.1 | LysR substrate-binding domain-containing protein | - |
| PCQ86_RS06725 | 1385054..1385347 | + | 294 | WP_035624306.1 | hypothetical protein | VF |
| PCQ86_RS06730 | 1385379..1386269 | - | 891 | WP_270175140.1 | LysR substrate-binding domain-containing protein | - |
| PCQ86_RS06735 | 1386478..1389597 | - | 3120 | WP_270175141.1 | efflux RND transporter permease subunit | - |
| PCQ86_RS06740 | 1389594..1389785 | - | 192 | WP_049756457.1 | copper-binding protein | - |
| PCQ86_RS06745 | 1389840..1390820 | - | 981 | WP_011804654.1 | copper resistance protein B | - |
| PCQ86_RS06750 | 1390846..1392738 | - | 1893 | WP_084217409.1 | copper resistance system multicopper oxidase | - |
| PCQ86_RS06755 | 1392982..1393641 | + | 660 | WP_011804656.1 | Transcriptional regulatory protein CusR | VF |
| PCQ86_RS06760 | 1393703..1393981 | + | 279 | Protein_1334 | IS3 family transposase ISMpe1 | Transposase |
| PCQ86_RS06765 | 1393991..1395151 | - | 1161 | WP_011804657.1 | IS30 family transposase ISHar4 | Transposase |
| PCQ86_RS06770 | 1395214..1395576 | + | 363 | Protein_1336 | IS3 family transposase | - |
| PCQ86_RS06775 | 1395794..1397728 | - | 1935 | WP_011804659.1 | cytochrome c/FTR1 family iron permease | - |
| PCQ86_RS06780 | 1397856..1398290 | - | 435 | WP_011804660.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PCQ86_RS06785 | 1398385..1400784 | + | 2400 | WP_009518529.1 | heavy metal translocating P-type ATPase | - |
| PCQ86_RS06790 | 1400781..1401875 | + | 1095 | WP_009518528.1 | Lipoprotein signal peptidase | VF |
| PCQ86_RS06795 | 1402272..1404155 | - | 1884 | WP_009518527.1 | MobH family relaxase | - |
| PCQ86_RS06800 | 1404454..1404771 | + | 318 | WP_038204260.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| PCQ86_RS06805 | 1404771..1405229 | + | 459 | WP_011804662.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| PCQ86_RS06810 | 1405256..1405633 | + | 378 | WP_011804663.1 | DUF3742 family protein | - |
| PCQ86_RS06815 | 1405649..1407166 | - | 1518 | WP_011804664.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PCQ86_RS06820 | 1407181..1407540 | - | 360 | WP_009518522.1 | hypothetical protein | - |
| PCQ86_RS06825 | 1407537..1408931 | - | 1395 | WP_009518521.1 | integrating conjugative element protein | - |
| PCQ86_RS06830 | 1408941..1409888 | - | 948 | WP_121382470.1 | TIGR03756 family integrating conjugative element protein | - |
| PCQ86_RS06835 | 1409885..1410331 | - | 447 | WP_011804667.1 | TIGR03757 family integrating conjugative element protein | - |
| PCQ86_RS06840 | 1410495..1410989 | - | 495 | WP_003119996.1 | DNA repair protein RadC | - |
| PCQ86_RS06845 | 1411169..1411933 | - | 765 | WP_220638721.1 | thioredoxin domain-containing protein | - |
| PCQ86_RS06850 | 1411958..1414849 | - | 2892 | WP_024766751.1 | conjugative transfer ATPase | - |
| PCQ86_RS06855 | 1414849..1415298 | - | 450 | WP_009516217.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PCQ86_RS06860 | 1415279..1416709 | - | 1431 | WP_011804670.1 | TIGR03752 family integrating conjugative element protein | - |
| PCQ86_RS06865 | 1416699..1417607 | - | 909 | WP_009516219.1 | TIGR03749 family integrating conjugative element protein | - |
| PCQ86_RS06870 | 1417604..1418296 | - | 693 | WP_009516220.1 | TIGR03746 family integrating conjugative element protein | - |
| PCQ86_RS06875 | 1418293..1418691 | - | 399 | WP_009516221.1 | TIGR03750 family conjugal transfer protein | - |
| PCQ86_RS06880 | 1418703..1419062 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PCQ86_RS06885 | 1419079..1419312 | - | 234 | WP_270175142.1 | TIGR03758 family integrating conjugative element protein | - |
| PCQ86_RS06890 | 1419309..1419692 | - | 384 | WP_011804671.1 | RAQPRD family integrative conjugative element protein | - |
| PCQ86_RS06895 | 1419896..1420366 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PCQ86_RS06900 | 1420363..1420938 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PCQ86_RS06905 | 1420956..1421870 | + | 915 | WP_003050256.1 | AAA family ATPase | - |
| PCQ86_RS06910 | 1421867..1422337 | + | 471 | WP_011804672.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PCQ86_RS06915 | 1422334..1422834 | + | 501 | WP_011804673.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PCQ86_RS06920 | 1422834..1423736 | + | 903 | WP_011804674.1 | CBASS oligonucleotide cyclase | - |
| PCQ86_RS06925 | 1423775..1424500 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PCQ86_RS06930 | 1424510..1427134 | + | 2625 | WP_011804675.1 | AAA family ATPase | - |
| PCQ86_RS06935 | 1427175..1427924 | - | 750 | WP_023108453.1 | TIGR03747 family integrating conjugative element membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|