MGE detailed information
MGE type: Genomic_island MGE length: 16253 bp
Accession: NZ_CP114895 Location: 611516..627768 Organism: Escherichia coli strain CM56 Replicon: chromosome
Accession: NZ_CP114895 Location: 611516..627768 Organism: Escherichia coli strain CM56 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6106_RS02885 (607207) | 607207..608520 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| O6106_RS02890 (608532) | 608532..608810 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| O6106_RS02895 (608807) | 608807..609928 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| O6106_RS02900 (610173) | 610173..610289 | - | 117 | Protein_547 | VOC family protein | - |
| O6106_RS02905 (610327) | 610327..610545 | - | 219 | Protein_548 | hypothetical protein | - |
| O6106_RS02910 (610714) | 610714..611460 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| O6106_RS02915 (611516) | 611516..612061 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| O6106_RS02920 (612073) | 612073..612330 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| O6106_RS02925 (612821) | 612821..612952 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| O6106_RS02930 (613068) | 613068..614308 | + | 1241 | Protein_553 | helicase YjhR | - |
| O6106_RS02935 (614576) | 614576..614781 | - | 206 | Protein_554 | HNH endonuclease | - |
| O6106_RS02940 (614891) | 614891..615871 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| O6106_RS02945 (615936) | 615936..617042 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| O6106_RS02950 (617062) | 617062..617778 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| O6106_RS02955 (619048) | 619048..620256 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| O6106_RS02960 (620363) | 620363..622372 | - | 2010 | Protein_559 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| O6106_RS02965 (622626) | 622626..623120 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| O6106_RS02970 (623169) | 623169..623906 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| O6106_RS02975 (623909) | 623909..624448 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| O6106_RS02980 (624555) | 624555..625028 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| O6106_RS02985 (625019) | 625019..625789 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| O6106_RS02990 (626408) | 626408..627133 | + | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| O6106_RS02995 (627091) | 627091..627768 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| O6106_RS03000 (627806) | 627806..628594 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| O6106_RS03005 (628735) | 628735..628971 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| O6106_RS03025 (629600) | 629600..630631 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| O6106_RS03030 (630734) | 630734..631147 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| O6106_RS03035 (631116) | 631116..631562 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| O6106_RS03040 (631577) | 631577..632254 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |