MGE detailed information
MGE type: Genomic_island MGE length: 23940 bp
Accession: NZ_CP114894 Location: 3893335..3917274 Organism: Escherichia coli strain CM19 Replicon: chromosome
Accession: NZ_CP114894 Location: 3893335..3917274 Organism: Escherichia coli strain CM19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6X69_RS18990 (3888455) | 3888455..3889804 | - | 1350 | WP_001128363.1 | GntP family permease | - |
| O6X69_RS18995 (3889911) | 3889911..3891878 | - | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| O6X69_RS19000 (3891889) | 3891889..3892794 | - | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| O6X69_RS19005 (3892799) | 3892799..3893586 | - | 788 | Protein_3691 | IclR family transcriptional regulator | - |
| O6X69_RS19010 (3893889) | 3893889..3894671 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| O6X69_RS19015 (3894688) | 3894688..3895320 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| O6X69_RS19020 (3895332) | 3895332..3895763 | - | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| O6X69_RS19025 (3895894) | 3895894..3896700 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| O6X69_RS19030 (3896713) | 3896713..3898026 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| O6X69_RS19035 (3898038) | 3898038..3898316 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| O6X69_RS19040 (3898313) | 3898313..3899434 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| O6X69_RS19045 (3899679) | 3899679..3899795 | - | 117 | Protein_3699 | VOC family protein | - |
| O6X69_RS19050 (3899833) | 3899833..3900051 | - | 219 | Protein_3700 | hypothetical protein | - |
| O6X69_RS19055 (3900220) | 3900220..3900966 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| O6X69_RS19060 (3901022) | 3901022..3901567 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| O6X69_RS19065 (3901579) | 3901579..3901836 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| O6X69_RS19070 (3902327) | 3902327..3902458 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| O6X69_RS19075 (3902574) | 3902574..3903814 | + | 1241 | Protein_3705 | helicase YjhR | - |
| O6X69_RS19080 (3904082) | 3904082..3904287 | - | 206 | Protein_3706 | HNH endonuclease | - |
| O6X69_RS19085 (3904397) | 3904397..3905377 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| O6X69_RS19090 (3905442) | 3905442..3906548 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| O6X69_RS19095 (3906568) | 3906568..3907284 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| O6X69_RS19100 (3908554) | 3908554..3909762 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| O6X69_RS19105 (3909869) | 3909869..3911878 | - | 2010 | Protein_3711 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| O6X69_RS19110 (3912132) | 3912132..3912626 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| O6X69_RS19115 (3912675) | 3912675..3913412 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| O6X69_RS19120 (3913415) | 3913415..3913954 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| O6X69_RS19125 (3914061) | 3914061..3914534 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| O6X69_RS19130 (3914525) | 3914525..3915295 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| O6X69_RS19135 (3915914) | 3915914..3916639 | + | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| O6X69_RS19140 (3916597) | 3916597..3917274 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| O6X69_RS19145 (3917312) | 3917312..3918100 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| O6X69_RS19150 (3918241) | 3918241..3918477 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| O6X69_RS19170 (3919106) | 3919106..3920137 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| O6X69_RS19175 (3920240) | 3920240..3920653 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| O6X69_RS19180 (3920622) | 3920622..3921068 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| O6X69_RS19185 (3921083) | 3921083..3921760 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0.009 |