MGE detailed information
MGE type: Genomic_island MGE length: 46434 bp
Accession: NZ_CP114894 Location: 2108576..2155009 Organism: Escherichia coli strain CM19 Replicon: chromosome
Accession: NZ_CP114894 Location: 2108576..2155009 Organism: Escherichia coli strain CM19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6X69_RS10375 (2104212) | 2104212..2105873 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| O6X69_RS10380 (2106022) | 2106022..2106363 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| O6X69_RS10385 (2106425) | 2106425..2106715 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| O6X69_RS10390 (2106705) | 2106705..2107142 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| O6X69_RS10395 (2107313) | 2107313..2107795 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| O6X69_RS10405 (2108576) | 2108576..2109817 | + | 1242 | WP_000101722.1 | Prophage integrase IntA ; Integrase | Integrase |
| O6X69_RS10410 (2110061) | 2110061..2111017 | - | 957 | WP_000510827.1 | protein YfjH | - |
| O6X69_RS10415 (2111061) | 2111061..2111273 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| O6X69_RS10420 (2111402) | 2111402..2112811 | + | 1410 | WP_000481742.1 | YfjI family protein | - |
| O6X69_RS10425 (2112964) | 2112964..2113590 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| O6X69_RS10430 (2113768) | 2113768..2115957 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| O6X69_RS10435 (2115954) | 2115954..2117570 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| O6X69_RS10440 (2117930) | 2117930..2118193 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| O6X69_RS10445 (2118335) | 2118335..2119408 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| O6X69_RS10450 (2119401) | 2119401..2119772 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| O6X69_RS10455 (2120127) | 2120127..2120990 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| O6X69_RS10460 (2121082) | 2121082..2121903 | + | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| O6X69_RS10465 (2122120) | 2122120..2122821 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| O6X69_RS10470 (2122862) | 2122862..2123098 | + | 237 | WP_001144029.1 | protein YpjK | - |
| O6X69_RS10475 (2123098) | 2123098..2123541 | + | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| O6X69_RS10480 (2123565) | 2123565..2124032 | + | 468 | WP_000702495.1 | protein YfjT | - |
| O6X69_RS10485 (2124419) | 2124419..2124571 | - | 153 | Protein_2044 | arsenate reductase | - |
| O6X69_RS10490 (2124584) | 2124584..2125593 | - | 1010 | Protein_2045 | arsenic transporter | - |
| O6X69_RS10495 (2125735) | 2125735..2127438 | + | 1704 | WP_000896263.1 | protein YfjW | - |
| O6X69_RS10500 (2128049) | 2128049..2128233 | + | 185 | Protein_2047 | DUF905 family protein | - |
| O6X69_RS10505 (2128336) | 2128336..2128794 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| O6X69_RS10510 (2128803) | 2128803..2129285 | + | 483 | WP_001407480.1 | RadC family protein | - |
| O6X69_RS10515 (2129294) | 2129294..2129494 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| O6X69_RS10520 (2129532) | 2129532..2129849 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| O6X69_RS10525 (2129870) | 2129870..2130199 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| O6X69_RS10530 (2130563) | 2130563..2135143 | - | 4581 | WP_010723187.1 | putative autotransporter | VF |
| O6X69_RS10535 (2135208) | 2135208..2135327 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| O6X69_RS10540 (2135482) | 2135482..2135661 | - | 180 | WP_087676347.1 | DNA invertase | - |
| O6X69_RS10545 (2136055) | 2136055..2137428 | - | 1374 | Protein_2056 | DUF5507 domain-containing protein | - |
| O6X69_RS10550 (2138650) | 2138650..2139834 | - | 1185 | WP_203217105.1 | restriction endonuclease subunit S | - |
| O6X69_RS10555 (2139827) | 2139827..2141383 | - | 1557 | WP_203217104.1 | type I restriction-modification system subunit M | - |
| O6X69_RS10560 (2142334) | 2142334..2142518 | + | 185 | Protein_2059 | DUF1317 domain-containing protein | - |
| O6X69_RS10565 (2142491) | 2142491..2142598 | + | 108 | Protein_2060 | DUF1382 family protein | - |
| O6X69_RS10575 (2143362) | 2143362..2145614 | + | 2253 | Protein_2061 | alpha-amylase family glycosyl hydrolase | - |
| O6X69_RS10580 (2145950) | 2145950..2146927 | + | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| O6X69_RS10585 (2146947) | 2146947..2148215 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| O6X69_RS10590 (2148238) | 2148238..2149686 | + | 1449 | WP_000772830.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| O6X69_RS10595 (2149700) | 2149700..2150980 | + | 1281 | WP_001087611.1 | 4-aminobutyrate aminotransferase GabT | VF |
| O6X69_RS10600 (2151218) | 2151218..2152618 | + | 1401 | WP_001295173.1 | GABA permease | - |
| O6X69_RS10605 (2152639) | 2152639..2153301 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| O6X69_RS10610 (2153302) | 2153302..2153751 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| O6X69_RS10615 (2153835) | 2153835..2153993 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| O6X69_RS10620 (2154176) | 2154176..2154475 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| O6X69_RS10625 (2154485) | 2154485..2155009 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| O6X69_RS10630 (2155056) | 2155056..2155460 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| O6X69_RS10635 (2156129) | 2156129..2156578 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| O6X69_RS10640 (2156615) | 2156615..2156959 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| O6X69_RS10645 (2157111) | 2157111..2157440 | + | 330 | WP_024255351.1 | DUF883 domain-containing protein | - |
| O6X69_RS10650 (2157688) | 2157688..2157933 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| O6X69_RS10655 (2157930) | 2157930..2158340 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|