MGE detailed information
MGE type: Genomic_island MGE length: 16253 bp
Accession: NZ_CP114892 Location: 3767291..3783543 Organism: Escherichia coli strain CM5 Replicon: chromosome
Accession: NZ_CP114892 Location: 3767291..3783543 Organism: Escherichia coli strain CM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6Q95_RS18370 (3762982) | 3762982..3764295 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| O6Q95_RS18375 (3764307) | 3764307..3764585 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| O6Q95_RS18380 (3764582) | 3764582..3765703 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| O6Q95_RS18385 (3765948) | 3765948..3766064 | - | 117 | Protein_3582 | VOC family protein | - |
| O6Q95_RS18390 (3766102) | 3766102..3766320 | - | 219 | Protein_3583 | hypothetical protein | - |
| O6Q95_RS18395 (3766489) | 3766489..3767235 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| O6Q95_RS18400 (3767291) | 3767291..3767836 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| O6Q95_RS18405 (3767848) | 3767848..3768105 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| O6Q95_RS18410 (3768596) | 3768596..3768727 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| O6Q95_RS18415 (3768843) | 3768843..3770083 | + | 1241 | Protein_3588 | helicase YjhR | - |
| O6Q95_RS18420 (3770351) | 3770351..3770556 | - | 206 | Protein_3589 | HNH endonuclease | - |
| O6Q95_RS18425 (3770666) | 3770666..3771646 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| O6Q95_RS18430 (3771711) | 3771711..3772817 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| O6Q95_RS18435 (3772837) | 3772837..3773553 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| O6Q95_RS18440 (3774823) | 3774823..3776031 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| O6Q95_RS18445 (3776138) | 3776138..3778147 | - | 2010 | Protein_3594 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| O6Q95_RS18450 (3778401) | 3778401..3778895 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| O6Q95_RS18455 (3778944) | 3778944..3779681 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| O6Q95_RS18460 (3779684) | 3779684..3780223 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| O6Q95_RS18465 (3780330) | 3780330..3780803 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| O6Q95_RS18470 (3780794) | 3780794..3781564 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| O6Q95_RS18475 (3782183) | 3782183..3782908 | + | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| O6Q95_RS18480 (3782866) | 3782866..3783543 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| O6Q95_RS18485 (3783581) | 3783581..3784369 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| O6Q95_RS18490 (3784510) | 3784510..3784746 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| O6Q95_RS18510 (3785375) | 3785375..3786406 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| O6Q95_RS18515 (3786509) | 3786509..3786922 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| O6Q95_RS18520 (3786891) | 3786891..3787337 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| O6Q95_RS18525 (3787352) | 3787352..3788029 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |