MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92752 bp
Accession: NZ_CP114133 Location: 1..92752 Organism: Escherichia coli strain NJS001 Replicon: plasmid pNJS001-3
Accession: NZ_CP114133 Location: 1..92752 Organism: Escherichia coli strain NJS001 Replicon: plasmid pNJS001-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0F11_RS28520 (303) | 303..861 | - | 559 | Protein_1 | fertility inhibition protein FinO | - |
| N0F11_RS28525 (964) | 964..1824 | - | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| N0F11_RS28530 (1883) | 1883..2629 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| N0F11_RS28535 (2649) | 2649..4038 | - | 1390 | Protein_4 | Multifunctional conjugation protein TraI | Relaxase |
| N0F11_RS28540 (4095) | 4095..4346 | + | 252 | Protein_5 | IS3 family transposase IS1203 | Transposase |
| N0F11_RS28545 (4353) | 4353..4598 | + | 246 | Protein_6 | IS3 family transposase IS1203 | Transposase |
| N0F11_RS28550 (4591) | 4591..4815 | - | 225 | Protein_7 | IS3 family transposase IS3H | Transposase |
| N0F11_RS28555 (4889) | 4889..14397 | - | 9509 | Protein_8 | hypothetical protein | VF |
| N0F11_RS28560 (14504) | 14504..14656 | - | 153 | Protein_9 | IS1 family transposase | - |
| N0F11_RS28565 (14653) | 14653..14773 | - | 121 | Protein_10 | IS21 family transposase ISEc62 | Transposase |
| N0F11_RS28570 (14813) | 14813..15076 | - | 264 | Protein_11 | IS21 family transposase ISEc62 | Transposase |
| N0F11_RS28575 (15170) | 15170..15519 | + | 350 | Protein_12 | IS3 family transposase IS3H | Transposase |
| N0F11_RS28580 (15816) | 15816..15956 | - | 141 | Protein_13 | APH(6) family putative aminoglycoside O-phosphotransferase | - |
| N0F11_RS28585 (16156) | 16156..16587 | - | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| N0F11_RS28590 (16655) | 16655..18676 | - | 2022 | Protein_15 | hypothetical protein | Relaxase |
| N0F11_RS28595 (18810) | 18810..18935 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| N0F11_RS28600 (18877) | 18877..19026 | - | 150 | Protein_17 | DUF5431 family protein | - |
| - (19033) | 19033..19231 | - | 199 | NuclAT_0 | - | - |
| - (19033) | 19033..19231 | - | 199 | NuclAT_0 | - | - |
| - (19033) | 19033..19231 | - | 199 | NuclAT_0 | - | - |
| - (19033) | 19033..19231 | - | 199 | NuclAT_0 | - | - |
| N0F11_RS28605 (19200) | 19200..19961 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| N0F11_RS28610 (19958) | 19958..20392 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| N0F11_RS28615 (20447) | 20447..22405 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| N0F11_RS28620 (22471) | 22471..22704 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| N0F11_RS28625 (22761) | 22761..23213 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| N0F11_RS28630 (23239) | 23239..23445 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| N0F11_RS28635 (23515) | 23515..24000 | + | 486 | WP_032179564.1 | hypothetical protein | - |
| N0F11_RS28640 (24086) | 24086..24649 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| N0F11_RS28645 (24696) | 24696..26057 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| N0F11_RS28650 (26109) | 26109..26339 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| N0F11_RS28655 (26856) | 26856..27365 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| N0F11_RS28660 (27335) | 27335..27526 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| N0F11_RS28665 (27523) | 27523..27945 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| N0F11_RS28670 (27992) | 27992..28417 | - | 426 | WP_001198930.1 | antirestriction protein | - |
| N0F11_RS28675 (28835) | 28835..29611 | - | 777 | WP_176225858.1 | hypothetical protein | - |
| N0F11_RS28680 (29657) | 29657..30211 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| N0F11_RS28685 (30105) | 30105..30326 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| N0F11_RS28690 (30327) | 30327..31010 | - | 684 | WP_000085945.1 | DNA methylase | - |
| N0F11_RS28695 (31087) | 31087..31392 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| N0F11_RS28700 (31396) | 31396..32298 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| N0F11_RS28705 (32993) | 32993..33964 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N0F11_RS28710 (33964) | 33964..35130 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| N0F11_RS28715 (35718) | 35718..35978 | - | 261 | WP_071526583.1 | RepB family plasmid replication initiator protein | - |
| N0F11_RS28720 (36016) | 36016..37229 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| N0F11_RS28725 (37952) | 37952..38758 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| N0F11_RS28730 (38759) | 38759..39064 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N0F11_RS28735 (39066) | 39066..39284 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N0F11_RS28740 (39743) | 39743..40426 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| N0F11_RS28745 (40423) | 40423..41043 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| N0F11_RS28750 (41040) | 41040..41240 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| N0F11_RS28755 (41648) | 41648..42625 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| N0F11_RS28760 (42910) | 42910..43650 | - | 741 | WP_064562143.1 | tyrosine-type recombinase/integrase | - |
| N0F11_RS28765 (43771) | 43771..44001 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| N0F11_RS28770 (44170) | 44170..44454 | - | 285 | WP_001358890.1 | hypothetical protein | VF |
| N0F11_RS28775 (44484) | 44484..44678 | - | 195 | WP_001303402.1 | hypothetical protein | VF |
| N0F11_RS28780 (44745) | 44745..46184 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| N0F11_RS28785 (46188) | 46188..48308 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| N0F11_RS28790 (48358) | 48358..51354 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| N0F11_RS28795 (51356) | 51356..51871 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| N0F11_RS28805 (53762) | 53762..54163 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| N0F11_RS28810 (54255) | 54255..54971 | - | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N0F11_RS28815 (55146) | 55146..55658 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| N0F11_RS28820 (55645) | 55645..56922 | - | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| N0F11_RS28825 (56856) | 56856..57833 | - | 978 | WP_000776550.1 | hypothetical protein | VF |
| N0F11_RS28830 (57830) | 57830..58429 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| N0F11_RS28835 (58426) | 58426..58773 | - | 348 | WP_000173396.1 | hypothetical protein | VF |
| N0F11_RS28840 (58788) | 58788..59342 | - | 555 | WP_064562139.1 | Putative type II secretion system protein H | VF |
| N0F11_RS28845 (59339) | 59339..59773 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| N0F11_RS28850 (59804) | 59804..61027 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| N0F11_RS28855 (61029) | 61029..62534 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| N0F11_RS28860 (62534) | 62534..64501 | - | 1968 | WP_001302177.1 | Secretin PulD | VF |
| N0F11_RS28865 (64502) | 64502..65377 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| N0F11_RS28870 (65464) | 65464..68160 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| N0F11_RS28875 (68594) | 68594..70132 | - | 1539 | WP_000998051.1 | IS66 family transposase ISEc8 | Transposase |
| N0F11_RS28880 (70182) | 70182..70529 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| N0F11_RS28885 (70526) | 70526..70906 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| N0F11_RS28890 (71050) | 71050..71136 | + | 87 | Protein_75 | IS3 family transposase ISEhe3 | Transposase |
| N0F11_RS28895 (71240) | 71240..71428 | - | 189 | Protein_76 | hypothetical protein | - |
| N0F11_RS28900 (71481) | 71481..72479 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N0F11_RS28905 (72553) | 72553..74274 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| N0F11_RS28910 (74364) | 74364..75470 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| N0F11_RS28915 (75470) | 75470..76291 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| N0F11_RS28920 (77733) | 77733..78214 | + | 482 | Protein_81 | IS1 family transposase IS1N | Transposase |
| N0F11_RS28925 (78470) | 78470..82371 | - | 3902 | Protein_82 | Serine protease EspP | VF |
| N0F11_RS28930 (82552) | 82552..83540 | - | 989 | Protein_83 | IS3 family transposase IS629 | Transposase |
| N0F11_RS28935 (83597) | 83597..83986 | - | 390 | WP_001172748.1 | cytochrome b562 | - |
| N0F11_RS28940 (84030) | 84030..86240 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| N0F11_RS28945 (86417) | 86417..86602 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| N0F11_RS28950 (86602) | 86602..87018 | + | 417 | Protein_87 | IS91 family transposase | - |
| N0F11_RS28955 (87018) | 87018..87584 | + | 567 | Protein_88 | IS3 family transposase ISSd1 | Transposase |
| N0F11_RS28960 (87628) | 87628..87843 | + | 216 | Protein_89 | transposase | - |
| N0F11_RS28965 (87943) | 87943..88149 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| N0F11_RS28970 (88244) | 88244..88519 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0F11_RS28975 (88519) | 88519..88803 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N0F11_RS28980 (89714) | 89714..90571 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| N0F11_RS28985 (90564) | 90564..90638 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| N0F11_RS28990 (90874) | 90874..91128 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| N0F11_RS28995 (91368) | 91368..91706 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| N0F11_RS29000 (91744) | 91744..91953 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| N0F11_RS29005 (91999) | 91999..92460 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|