MGE detailed information
MGE type: Prophage MGE length: 40901 bp
Accession: NZ_CP114130 Location: 2215570..2256470 Organism: Escherichia coli strain NJS001 Replicon: chromosome
Accession: NZ_CP114130 Location: 2215570..2256470 Organism: Escherichia coli strain NJS001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0F11_RS10955 () | 2211559..2211606 | + | 48 | WP_211180494.1 | protein YnaN | - |
| N0F11_RS10960 () | 2211620..2212603 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| N0F11_RS10965 () | 2212878..2213048 | + | 171 | WP_001625136.1 | protein YnaL | - |
| N0F11_RS10970 () | 2213081..2214454 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| N0F11_RS10975 () | 2214583..2215518 | - | 936 | WP_001157382.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| N0F11_RS10980 () | 2215570..2216805 | - | 1236 | WP_000040845.1 | Putative defective protein IntQ ; Integrase | Integrase |
| N0F11_RS10985 () | 2216807..2217022 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| N0F11_RS10990 () | 2217122..2217310 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2217126..2217304 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2217126..2217304 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2217126..2217304 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2217126..2217304 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| N0F11_RS10995 () | 2217303..2217497 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| N0F11_RS11000 () | 2217554..2218363 | - | 810 | WP_000166315.1 | recombination protein RecT | - |
| N0F11_RS11005 () | 2218356..2220983 | - | 2628 | WP_032324100.1 | exodeoxyribonuclease VIII | - |
| N0F11_RS11010 () | 2221064..2221234 | - | 171 | WP_001427414.1 | YdaE family protein | - |
| N0F11_RS11015 () | 2221234..2221455 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| N0F11_RS11020 () | 2221876..2222028 | - | 153 | WP_001169150.1 | DUF1391 family protein | - |
| N0F11_RS11025 () | 2222039..2222173 | - | 135 | WP_000233806.1 | hypothetical protein | - |
| N0F11_RS11030 () | 2222409..2222873 | - | 465 | WP_001253183.1 | helix-turn-helix domain-containing protein | - |
| N0F11_RS11035 () | 2222978..2223253 | + | 276 | WP_000171140.1 | YdaS family helix-turn-helix protein | - |
| N0F11_RS11040 () | 2223237..2223658 | + | 422 | Protein_2161 | toxin YdaT family protein | - |
| N0F11_RS11045 () | 2223736..2224524 | + | 789 | WP_001489122.1 | hypothetical protein | - |
| N0F11_RS11050 () | 2224531..2225277 | + | 747 | WP_000788984.1 | ATP-binding protein | - |
| N0F11_RS11055 () | 2225300..2226061 | + | 762 | WP_176225815.1 | DUF1627 domain-containing protein | - |
| N0F11_RS11060 () | 2226077..2226508 | + | 432 | WP_176225814.1 | DUF977 family protein | - |
| N0F11_RS11065 () | 2226495..2226746 | + | 252 | WP_250844898.1 | hypothetical protein | - |
| N0F11_RS11070 () | 2226945..2227283 | + | 339 | WP_152917776.1 | hypothetical protein | - |
| - | 2227483..2227541 | - | 59 | - | - | Antitoxin Detail |
| N0F11_RS11075 () | 2227553..2227708 | + | 156 | WP_000813255.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| N0F11_RS11080 () | 2227962..2228039 | + | 78 | Protein_2169 | hypothetical protein | - |
| N0F11_RS11085 () | 2228195..2228794 | + | 600 | WP_176225812.1 | DUF1367 family protein | - |
| N0F11_RS11090 () | 2228794..2229084 | + | 291 | WP_176225811.1 | DUF1364 domain-containing protein | - |
| N0F11_RS11095 () | 2229081..2229623 | + | 543 | WP_000640110.1 | DUF1133 family protein | - |
| N0F11_RS11105 () | 2229950..2230084 | - | 135 | Protein_2173 | hypothetical protein | - |
| N0F11_RS11110 () | 2230325..2232271 | + | 1947 | WP_269134735.1 | DUF1737 domain-containing protein | - |
| N0F11_RS11115 () | 2232409..2232588 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| N0F11_RS11120 () | 2232629..2232874 | + | 246 | WP_100004763.1 | DUF826 domain-containing protein | - |
| N0F11_RS11125 () | 2232952..2233167 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| N0F11_RS11130 () | 2233171..2233812 | + | 642 | Protein_2178 | hypothetical protein | - |
| N0F11_RS11135 () | 2233855..2234388 | + | 534 | WP_176225867.1 | lysozyme | - |
| N0F11_RS11140 () | 2234908..2235093 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| N0F11_RS11145 () | 2235179..2235403 | + | 225 | WP_000736383.1 | hypothetical protein | - |
| N0F11_RS11150 () | 2235822..2236298 | + | 477 | WP_000373409.1 | DUF1441 family protein | - |
| N0F11_RS11155 () | 2236295..2238418 | + | 2124 | WP_001077625.1 | phage terminase large subunit family protein | - |
| N0F11_RS11160 () | 2238415..2238627 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| N0F11_RS11165 () | 2238627..2240129 | + | 1503 | WP_000974568.1 | phage portal protein | - |
| N0F11_RS11170 () | 2240074..2242098 | + | 2025 | WP_001114423.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| N0F11_RS11175 () | 2242186..2242512 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| N0F11_RS11180 () | 2242505..2242789 | + | 285 | Protein_2188 | DNA breaking-rejoining protein | - |
| N0F11_RS11185 () | 2242792..2243414 | + | 623 | Protein_2189 | phage tail protein | - |
| N0F11_RS11190 () | 2243427..2243824 | + | 398 | Protein_2190 | phage tail terminator protein | - |
| N0F11_RS11195 () | 2243832..2244589 | + | 758 | Protein_2191 | Ig domain-containing protein | - |
| N0F11_RS11200 () | 2244604..2245025 | + | 422 | Protein_2192 | phage minor tail protein G | - |
| N0F11_RS11205 () | 2245052..2245353 | + | 302 | Protein_2193 | phage tail assembly protein T | - |
| N0F11_RS11210 () | 2245403..2248052 | + | 2650 | Protein_2194 | phage tail tape measure protein | - |
| N0F11_RS11215 () | 2248049..2248378 | + | 330 | WP_000847298.1 | phage tail protein | - |
| N0F11_RS11220 () | 2248378..2249076 | + | 699 | WP_001419068.1 | phage minor tail protein L | - |
| N0F11_RS11225 () | 2249087..2249830 | + | 744 | WP_014640516.1 | C40 family peptidase | - |
| N0F11_RS11230 () | 2249827..2250411 | + | 585 | WP_024183528.1 | tail assembly protein | - |
| N0F11_RS11235 () | 2250657..2254151 | + | 3495 | WP_269134736.1 | host specificity protein J | - |
| N0F11_RS11240 () | 2254222..2254821 | + | 600 | WP_001230550.1 | Outer membrane protein X | VF |
| N0F11_RS11245 () | 2254886..2256199 | + | 1314 | WP_000268808.1 | ISNCY family transposase KIS | Transposase |
| N0F11_RS11250 () | 2256201..2256470 | + | 270 | WP_001023994.1 | phage tail fiber C-terminal domain-containing protein | - |
| N0F11_RS11255 () | 2256583..2257158 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| N0F11_RS11260 () | 2257231..2257860 | + | 630 | WP_001359536.1 | DUF1076 domain-containing protein | - |
| N0F11_RS11265 () | 2257942..2258583 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| N0F11_RS11270 () | 2259164..2259598 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| N0F11_RS11275 () | 2259739..2260852 | - | 1114 | Protein_2207 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|