MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP113541 Location: 1024093..1034519 Organism: Salmonella enterica strain CHC Replicon: chromosome
Accession: NZ_CP113541 Location: 1024093..1034519 Organism: Salmonella enterica strain CHC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV05_RS04850 (1019206) | 1019206..1019586 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| OXV05_RS04855 (1019642) | 1019642..1022209 | - | 2568 | WP_198903237.1 | DNA mismatch repair protein MutS | - |
| OXV05_RS04860 (1022368) | 1022368..1022889 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| OXV05_RS04865 (1023061) | 1023061..1023717 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| OXV05_RS04870 (1024064) | 1024064..1024269 | + | 206 | Protein_955 | IS5 family transposase ISEcl3 | Transposase |
| OXV05_RS04875 (1024342) | 1024342..1024869 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OXV05_RS04880 (1024866) | 1024866..1025156 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OXV05_RS04885 (1025426) | 1025426..1025604 | - | 179 | Protein_958 | IS3 family transposase | - |
| OXV05_RS04890 (1025845) | 1025845..1026171 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| OXV05_RS04895 (1026444) | 1026444..1026791 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| OXV05_RS04900 (1026776) | 1026776..1027225 | - | 450 | WP_000381610.1 | membrane protein | - |
| OXV05_RS04905 (1027656) | 1027656..1028099 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| OXV05_RS04910 (1028556) | 1028556..1029206 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| OXV05_RS04915 (1029203) | 1029203..1030891 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| OXV05_RS04920 (1030888) | 1030888..1032006 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| OXV05_RS04925 (1032031) | 1032031..1034088 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| OXV05_RS04930 (1034112) | 1034112..1034519 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| OXV05_RS04935 (1034516) | 1034516..1035811 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| OXV05_RS04940 (1035789) | 1035789..1036232 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| OXV05_RS04945 (1036232) | 1036232..1037242 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| OXV05_RS04950 (1037242) | 1037242..1038153 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| OXV05_RS04955 (1038143) | 1038143..1038817 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| OXV05_RS04960 (1038843) | 1038843..1039103 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |