MGE detailed information
MGE type: Prophage MGE length: 25383 bp
Accession: NZ_CP113538 Location: 2038043..2063425 Organism: Salmonella enterica strain XSK Replicon: chromosome
Accession: NZ_CP113538 Location: 2038043..2063425 Organism: Salmonella enterica strain XSK Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV06_RS09695 () | 2034316..2034957 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OXV06_RS09700 () | 2035057..2036235 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OXV06_RS09705 () | 2036366..2036656 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OXV06_RS09710 () | 2036724..2037077 | + | 354 | WP_001042119.1 | protein YebF | - |
| OXV06_RS09715 () | 2037171..2037830 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| OXV06_RS09720 () | 2038043..2040094 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| OXV06_RS09725 () | 2040129..2040827 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| OXV06_RS09730 () | 2040851..2041507 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| OXV06_RS09735 () | 2041615..2041845 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OXV06_RS09740 () | 2041983..2042357 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OXV06_RS09745 () | 2042358..2043233 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| OXV06_RS09750 () | 2043250..2043603 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2043703..2043848 | - | 146 | - | - | Antitoxin Detail |
| - | 2043743..2043846 | + | 104 | - | - | Toxin Detail |
| OXV06_RS09755 () | 2043977..2044900 | - | 924 | Protein_1906 | hypothetical protein ; Integrase | Integrase |
| OXV06_RS09760 () | 2045164..2045625 | - | 462 | Protein_1907 | DNA breaking-rejoining protein | - |
| OXV06_RS09765 () | 2045614..2045805 | + | 192 | Protein_1908 | glycoside hydrolase family 19 protein | - |
| OXV06_RS09770 () | 2045859..2046392 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| OXV06_RS09775 () | 2046649..2046816 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| OXV06_RS09780 () | 2046881..2047069 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| OXV06_RS09785 () | 2047124..2047384 | + | 261 | Protein_1912 | DUF1441 family protein | - |
| OXV06_RS09790 () | 2047386..2047601 | + | 216 | Protein_1913 | shikimate transporter | - |
| OXV06_RS09795 () | 2047599..2047943 | + | 345 | Protein_1914 | macro domain-containing protein | - |
| OXV06_RS09800 () | 2047953..2048423 | + | 471 | Protein_1915 | tail fiber assembly protein | - |
| OXV06_RS09805 () | 2048520..2048720 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| OXV06_RS09810 () | 2049110..2049290 | - | 181 | Protein_1917 | IS3 family transposase | - |
| OXV06_RS09815 () | 2049281..2049382 | + | 102 | Protein_1918 | arsenic transporter | - |
| OXV06_RS09820 () | 2050004..2050236 | + | 233 | Protein_1919 | helix-turn-helix domain-containing protein | - |
| OXV06_RS09825 () | 2050563..2051177 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| OXV06_RS09830 () | 2051187..2051345 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OXV06_RS09835 () | 2051478..2052392 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| OXV06_RS09840 () | 2053696..2054118 | - | 423 | Protein_1923 | hypothetical protein ; Integrase | Integrase |
| OXV06_RS09845 () | 2054188..2055382 | + | 1195 | Protein_1924 | IS256 family transposase IS285 | Transposase |
| OXV06_RS09850 () | 2055528..2055668 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| OXV06_RS09855 () | 2055834..2056103 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| OXV06_RS09860 () | 2056473..2056892 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| OXV06_RS09865 () | 2057280..2057756 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| OXV06_RS09870 () | 2058086..2058481 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| OXV06_RS09875 () | 2059164..2059886 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| OXV06_RS09880 () | 2060171..2060335 | + | 165 | WP_001134856.1 | membrane protein | - |
| OXV06_RS09885 () | 2060559..2061209 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| OXV06_RS09890 () | 2061228..2061419 | - | 192 | WP_000457836.1 | YebW family protein | - |
| OXV06_RS09895 () | 2061530..2061766 | - | 237 | WP_024131108.1 | YebV family protein | - |
| OXV06_RS09900 () | 2061884..2063323 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OXV06_RS09905 () | 2063401..2066034 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| OXV06_RS09910 () | 2066003..2067286 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| OXV06_RS09915 () | 2067415..2067912 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 |