MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP113538 Location: 1023965..1034391 Organism: Salmonella enterica strain XSK Replicon: chromosome
Accession: NZ_CP113538 Location: 1023965..1034391 Organism: Salmonella enterica strain XSK Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV06_RS04850 (1019078) | 1019078..1019458 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| OXV06_RS04855 (1019514) | 1019514..1022081 | - | 2568 | WP_198903237.1 | DNA mismatch repair protein MutS | - |
| OXV06_RS04860 (1022240) | 1022240..1022761 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| OXV06_RS04865 (1022933) | 1022933..1023589 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| OXV06_RS04870 (1023936) | 1023936..1024141 | + | 206 | Protein_955 | IS5 family transposase ISEcl3 | Transposase |
| OXV06_RS04875 (1024214) | 1024214..1024741 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OXV06_RS04880 (1024738) | 1024738..1025028 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OXV06_RS04885 (1025298) | 1025298..1025476 | - | 179 | Protein_958 | IS3 family transposase | - |
| OXV06_RS04890 (1025717) | 1025717..1026043 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| OXV06_RS04895 (1026316) | 1026316..1026663 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| OXV06_RS04900 (1026648) | 1026648..1027097 | - | 450 | WP_000381610.1 | membrane protein | - |
| OXV06_RS04905 (1027528) | 1027528..1027971 | - | 444 | WP_000715092.1 | Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | VF |
| OXV06_RS04910 (1028428) | 1028428..1029078 | + | 651 | WP_001674874.1 | Arginine--tRNA ligase | VF |
| OXV06_RS04915 (1029075) | 1029075..1030763 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| OXV06_RS04920 (1030760) | 1030760..1031878 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| OXV06_RS04925 (1031903) | 1031903..1033960 | + | 2058 | WP_000927219.1 | GTPase Der | VF |
| OXV06_RS04930 (1033984) | 1033984..1034391 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| OXV06_RS04935 (1034388) | 1034388..1035683 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| OXV06_RS04940 (1035661) | 1035661..1036104 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| OXV06_RS04945 (1036104) | 1036104..1037114 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| OXV06_RS04950 (1037114) | 1037114..1038025 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| OXV06_RS04955 (1038015) | 1038015..1038689 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| OXV06_RS04960 (1038715) | 1038715..1038975 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |