MGE detailed information
MGE type: Genomic_island MGE length: 11480 bp
Accession: NZ_CP113537 Location: 1006939..1018418 Organism: Salmonella enterica strain YZY Replicon: chromosome
Accession: NZ_CP113537 Location: 1006939..1018418 Organism: Salmonella enterica strain YZY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV04_RS04795 (1003084) | 1003084..1003464 | + | 381 | WP_126523876.1 | DUF4440 domain-containing protein | - |
| OXV04_RS04800 (1003520) | 1003520..1006087 | - | 2568 | WP_001005802.1 | DNA mismatch repair protein MutS | - |
| OXV04_RS04805 (1006246) | 1006246..1006767 | + | 522 | WP_061383865.1 | hypothetical protein | - |
| OXV04_RS04810 (1006939) | 1006939..1007595 | - | 657 | WP_058821376.1 | protein-serine/threonine phosphatase | - |
| OXV04_RS04815 (1007930) | 1007930..1008147 | + | 218 | Protein_944 | IS5 family transposase ISEcl3 | Transposase |
| OXV04_RS04820 (1008220) | 1008220..1008747 | - | 528 | WP_126523877.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OXV04_RS04825 (1008744) | 1008744..1009034 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OXV04_RS04830 (1009304) | 1009304..1009489 | - | 186 | Protein_947 | IS3 family transposase | - |
| OXV04_RS04835 (1009744) | 1009744..1010070 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| OXV04_RS04840 (1010343) | 1010343..1010690 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| OXV04_RS04845 (1010675) | 1010675..1011124 | - | 450 | WP_023261375.1 | hypothetical protein | - |
| OXV04_RS04850 (1011555) | 1011555..1011998 | - | 444 | WP_126523878.1 | hypothetical protein | VF |
| OXV04_RS04855 (1012455) | 1012455..1013105 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| OXV04_RS04860 (1013102) | 1013102..1014790 | + | 1689 | WP_000848102.1 | hypothetical protein | VF |
| OXV04_RS04865 (1014787) | 1014787..1015905 | + | 1119 | WP_000612166.1 | hypothetical protein | VF |
| OXV04_RS04870 (1015930) | 1015930..1017987 | + | 2058 | WP_126523879.1 | hypothetical protein | VF |
| OXV04_RS04875 (1018011) | 1018011..1018418 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| OXV04_RS04880 (1018415) | 1018415..1019710 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| OXV04_RS04885 (1019688) | 1019688..1020131 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| OXV04_RS04890 (1020131) | 1020131..1021141 | + | 1011 | WP_023137851.1 | SPI-1 type III secretion system protein SpaN | - |
| OXV04_RS04895 (1021141) | 1021141..1022052 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| OXV04_RS04900 (1022042) | 1022042..1022716 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| OXV04_RS04905 (1022742) | 1022742..1023002 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |