MGE detailed information
MGE type: Prophage MGE length: 41592 bp
Accession: NZ_CP113536 Location: 2673948..2715539 Organism: Salmonella enterica strain ZCX Replicon: chromosome
Accession: NZ_CP113536 Location: 2673948..2715539 Organism: Salmonella enterica strain ZCX Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV07_RS13105 () | 2669461..2669958 | - | 498 | WP_023139271.1 | GAF domain-containing protein | - |
| OXV07_RS13110 () | 2670087..2671370 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| OXV07_RS13115 () | 2671339..2673972 | + | 2634 | WP_001535256.1 | PqiB family protein | - |
| OXV07_RS13120 () | 2674050..2675489 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OXV07_RS13125 () | 2675607..2675843 | + | 237 | WP_024131108.1 | YebV family protein | - |
| OXV07_RS13130 () | 2675954..2676145 | + | 192 | WP_000457836.1 | YebW family protein | - |
| OXV07_RS13135 () | 2676164..2676814 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| OXV07_RS13140 () | 2677038..2677202 | - | 165 | WP_001134856.1 | membrane protein | - |
| OXV07_RS13145 () | 2677487..2678209 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| OXV07_RS13150 () | 2678893..2679288 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| OXV07_RS13155 () | 2679618..2680094 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| OXV07_RS13160 () | 2680482..2680901 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| OXV07_RS13165 () | 2681271..2681540 | + | 270 | WP_077944665.1 | hypothetical protein | - |
| OXV07_RS13170 () | 2681706..2681846 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| OXV07_RS13175 () | 2681992..2683186 | - | 1195 | Protein_2580 | IS256 family transposase IS285 | Transposase |
| OXV07_RS13180 () | 2683256..2683678 | + | 423 | Protein_2581 | hypothetical protein ; Integrase | Integrase |
| OXV07_RS13185 () | 2684982..2685896 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| OXV07_RS13190 () | 2686029..2686187 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OXV07_RS13195 () | 2686197..2686811 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| OXV07_RS13200 () | 2687138..2687370 | - | 233 | Protein_2585 | helix-turn-helix domain-containing protein | - |
| OXV07_RS13205 () | 2687992..2688093 | - | 102 | Protein_2586 | arsenic transporter | - |
| OXV07_RS13210 () | 2688084..2688264 | + | 181 | Protein_2587 | IS3 family transposase | - |
| OXV07_RS13215 () | 2688654..2688854 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| OXV07_RS13220 () | 2688951..2689421 | - | 471 | Protein_2589 | tail fiber assembly protein | - |
| OXV07_RS13225 () | 2689431..2689775 | - | 345 | Protein_2590 | macro domain-containing protein | - |
| OXV07_RS13230 () | 2689990..2690250 | - | 261 | Protein_2591 | DUF1441 family protein | - |
| OXV07_RS13235 () | 2690305..2690493 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| OXV07_RS13240 () | 2690558..2690725 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| OXV07_RS13245 () | 2690982..2691515 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| OXV07_RS13250 () | 2691569..2691760 | - | 192 | Protein_2595 | glycoside hydrolase family 19 protein | - |
| OXV07_RS13255 () | 2691749..2692210 | + | 462 | Protein_2596 | DNA breaking-rejoining protein | - |
| OXV07_RS13260 () | 2692474..2693397 | + | 924 | Protein_2597 | hypothetical protein ; Integrase | Integrase |
| - | 2693526..2693671 | + | 146 | - | - | Antitoxin Detail |
| - | 2693528..2693631 | - | 104 | - | - | Toxin Detail |
| OXV07_RS13265 () | 2693771..2694124 | - | 354 | WP_000722368.1 | YebY family protein | - |
| OXV07_RS13270 () | 2694141..2695016 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| OXV07_RS13275 () | 2695017..2695391 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OXV07_RS13280 () | 2695529..2695759 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OXV07_RS13285 () | 2695867..2696523 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| OXV07_RS13290 () | 2696547..2697245 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| OXV07_RS13295 () | 2697280..2699331 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| OXV07_RS13300 () | 2699544..2700203 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| OXV07_RS13305 () | 2700297..2700650 | - | 354 | WP_001042119.1 | protein YebF | - |
| OXV07_RS13310 () | 2700718..2701008 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OXV07_RS13315 () | 2701139..2702317 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OXV07_RS13320 () | 2702417..2703058 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OXV07_RS13325 () | 2703096..2704907 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| OXV07_RS13330 () | 2705142..2706617 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| OXV07_RS13335 () | 2706959..2707828 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| OXV07_RS13340 () | 2707952..2709394 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| OXV07_RS13345 () | 2709467..2710438 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| OXV07_RS13350 () | 2710555..2711874 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| OXV07_RS13355 () | 2711890..2712834 | - | 945 | WP_023139272.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| OXV07_RS13360 () | 2712913..2713668 | + | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| OXV07_RS13365 () | 2713665..2714450 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| OXV07_RS13370 () | 2714529..2715539 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| OXV07_RS13375 () | 2715548..2716159 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| OXV07_RS13380 () | 2716579..2717474 | + | 896 | Protein_2621 | DUF4034 domain-containing protein | - |
| OXV07_RS13385 () | 2718101..2718700 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| OXV07_RS13390 () | 2718702..2719223 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| OXV07_RS13395 () | 2719260..2720000 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| OXV07_RS13400 () | 2720030..2720482 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.003 |