MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 172503 bp
Accession: NZ_CP113486        Location: 1853982..2026484         Organism: Escherichia coli strain GTEN_23       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FG550_RS08895 (1850000) 1850000..1850524 + 525 WP_000537018.1 ProQ/FinO family protein -
FG550_RS08900 (1850706) 1850706..1850900 + 195 WP_072023354.1 hypothetical protein -
FG550_RS08905 (1851446) 1851446..1851679 - 234 WP_032144604.1 AlpA family transcriptional regulator -
FG550_RS08910 (1851734) 1851734..1851936 - 203 Protein_1745 hypothetical protein -
FG550_RS08915 (1852130) 1852130..1852540 - 411 WP_001013304.1 putative zinc ribbon protein -
FG550_RS08920 (1852537) 1852537..1852920 - 384 WP_000271012.1 putative zinc ribbon protein -
FG550_RS08925 (1853088) 1853088..1853657 - 570 WP_000221478.1 inovirus Gp2 family protein -
FG550_RS08930 (1853853) 1853853..1854047 + 195 WP_000236758.1 hypothetical protein -
FG550_RS08935 (1854327) 1854327..1854450 - 124 Protein_1750 Hha/YmoA family nucleoid-associated regulatory protein -
FG550_RS08940 (1855385) 1855385..1855591 + 207 WP_001095912.1 AlpA family transcriptional regulator -
FG550_RS08945 (1855677) 1855677..1856249 + 573 WP_001170560.1 hypothetical protein -
FG550_RS08950 (1856458) 1856458..1856565 + 108 Protein_1753 IS1 family transposase -
FG550_RS08955 (1857744) 1857744..1858763 + 1020 WP_001330680.1 hypothetical protein -
FG550_RS08960 (1858873) 1858873..1859745 + 873 WP_001069724.1 GTPase family protein -
FG550_RS08965 (1860080) 1860080..1863199 + 3120 WP_061089878.1 autotransporter adhesin Ag43 -
FG550_RS08970 (1863320) 1863320..1865836 + 2517 WP_268101396.1 hypothetical protein -
FG550_RS08975 (1865913) 1865913..1866368 + 456 WP_000581493.1 IrmA family protein -
FG550_RS08980 (1866488) 1866488..1868026 - 1539 WP_021545098.1 IS66 family transposase ISEc22 Transposase
FG550_RS08985 (1868075) 1868075..1868422 - 348 WP_000612617.1 IS66 family transposase ISKpn24 Transposase
FG550_RS08990 (1868419) 1868419..1868823 - 405 WP_001539664.1 IS66 family transposase ISEc22 Transposase
FG550_RS08995 (1868909) 1868909..1869142 + 234 WP_001119719.1 DUF905 family protein -
FG550_RS09000 (1869242) 1869242..1870060 + 819 WP_001234642.1 DUF932 domain-containing protein -
FG550_RS09005 (1870115) 1870115..1870600 + 486 WP_000849596.1 antirestriction protein -
FG550_RS09010 (1870616) 1870616..1871092 + 477 WP_001186788.1 RadC family protein -
FG550_RS09015 (1871179) 1871179..1871400 + 222 WP_000692349.1 DUF987 domain-containing protein -
FG550_RS09020 (1871480) 1871480..1871848 + 369 WP_001539669.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
FG550_RS09025 (1871938) 1871938..1872315 + 378 WP_000854720.1 TA system toxin CbtA family protein Toxin Detail
FG550_RS09030 (1872312) 1872312..1872800 + 489 WP_021535504.1 DUF5983 family protein -
FG550_RS09035 (1872812) 1872812..1873009 + 198 WP_000839238.1 DUF957 domain-containing protein -
FG550_RS09040 (1873102) 1873102..1873968 + 867 WP_001290180.1 DUF4942 domain-containing protein -
FG550_RS09045 (1874040) 1874040..1874303 + 264 WP_001143297.1 type II toxin-antitoxin system ParD family antitoxin -
FG550_RS09050 (1874300) 1874300..1874626 + 327 WP_000779482.1 type II toxin-antitoxin system RelE/ParE family toxin -
FG550_RS09055 (1875090) 1875090..1876355 + 1266 WP_001218869.1 Prophage integrase IntS ; Integrase Integrase
FG550_RS09060 (1876611) 1876611..1877654 + 1044 WP_000147018.1 hypothetical protein -
FG550_RS09065 (1878184) 1878184..1878881 + 698 WP_224181008.1 IS1 family transposase IS1A Transposase
FG550_RS09070 (1878898) 1878898..1879689 + 792 Protein_1777 IS3 family transposase -
FG550_RS09075 (1879856) 1879856..1880407 + 552 WP_001447126.1 Transcriptional repressor MprA VF
FG550_RS09085 (1881714) 1881714..1883213 - 1500 WP_001331567.1 basic amino acid/polyamine antiporter -
FG550_RS09090 (1883288) 1883288..1885657 - 2370 WP_000671170.1 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein -
FG550_RS09095 (1885762) 1885762..1887231 - 1470 WP_001331566.1 basic amino acid/polyamine antiporter -
FG550_RS09100 (1887484) 1887484..1888177 + 694 Protein_1783 IS1 family transposase IS1N Transposase
FG550_RS09105 (1888796) 1888796..1889140 + 345 Protein_1784 alcohol dehydrogenase catalytic domain-containing protein -
FG550_RS09110 (1889213) 1889213..1889470 + 258 Protein_1785 IS3 family transposase IS911 Transposase
FG550_RS09115 (1889483) 1889483..1889656 - 174 Protein_1786 hypothetical protein -
FG550_RS09120 (1889668) 1889668..1890147 - 480 Protein_1787 IS3 family transposase IS629 Transposase
FG550_RS09125 (1890231) 1890231..1891739 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
FG550_RS09130 (1892412) 1892412..1892795 - 384 Protein_1789 IS3 family transposase -
FG550_RS09135 (1892796) 1892796..1893587 + 792 Protein_1790 ATP-dependent helicase -
FG550_RS09140 (1893635) 1893635..1893958 - 324 WP_001564033.1 hypothetical protein -
FG550_RS09145 (1894023) 1894023..1894667 - 645 WP_001564034.1 hypothetical protein -
FG550_RS09150 (1894688) 1894688..1894957 - 270 WP_000226517.1 PerC family transcriptional regulator -
FG550_RS09155 (1895036) 1895036..1895674 - 639 WP_001564035.1 ParB N-terminal domain-containing protein -
FG550_RS09160 (1895659) 1895659..1896891 - 1233 WP_001564037.1 phosphoadenosine phosphosulfate reductase -
FG550_RS09165 (1897032) 1897032..1897676 - 645 WP_024196335.1 hypothetical protein -
FG550_RS09170 (1897793) 1897793..1899140 - 1348 Protein_1797 type VI secretion system ImpA family N-terminal domain-containing protein -
FG550_RS09175 (1899192) 1899192..1899378 - 187 Protein_1798 hypothetical protein -
FG550_RS09180 (1899534) 1899534..1901279 - 1746 WP_001564039.1 NERD domain-containing protein/DEAD/DEAH box helicase -
FG550_RS09185 (1901422) 1901422..1901682 - 261 Protein_1800 IS3 family transposase ISLad1 Transposase
FG550_RS09190 (1901827) 1901827..1901955 - 129 WP_001364398.1 hypothetical protein -
FG550_RS09195 (1902403) 1902403..1902594 + 192 WP_001287883.1 DUF4222 domain-containing protein -
FG550_RS09200 (1902647) 1902647..1902880 - 234 WP_000124185.1 hypothetical protein -
FG550_RS09205 (1902976) 1902976..1903476 - 501 Protein_1804 DNA-binding protein -
FG550_RS09210 (1903833) 1903833..1904951 + 1119 WP_000135343.1 NAD-dependent methanol dehydrogenase VF
FG550_RS09215 (1905091) 1905091..1905777 + 687 WP_001109982.1 propanediol utilization system phosphotransacylase GrpB -
FG550_RS09220 (1905832) 1905832..1906590 + 759 WP_001332070.1 propanediol utilization system chaperone GrpC -
FG550_RS09225 (1906574) 1906574..1907299 + 726 WP_001329683.1 propanediol utilization system flavoprotein GrpD -
FG550_RS09230 (1907311) 1907311..1907580 + 270 WP_001564041.1 propanediol utilization microcompartment vertex protein GrpE -
FG550_RS09235 (1907608) 1907608..1908105 + 498 WP_001564042.1 propanediol utilization system heme-binding protein GrpF -
FG550_RS09240 (1908134) 1908134..1909330 + 1197 WP_001362987.1 propanediol utilization system propionate kinase GrpG -
FG550_RS09245 (1909615) 1909615..1909896 + 282 WP_001301171.1 propanediol utilization system shell hexameric protein GrpH -
FG550_RS09250 (1909918) 1909918..1910703 + 786 WP_001205499.1 propanediol utilization microcompartment protein GrpI -
FG550_RS09255 (1910764) 1910764..1912281 + 1518 WP_000997839.1 N-succinylglutamate 5-semialdehyde dehydrogenase VF
FG550_RS09260 (1912305) 1912305..1912604 + 300 WP_000746009.1 propanediol utilization system shell hexameric protein GrpK -
FG550_RS09265 (1912615) 1912615..1913190 + 576 WP_000722279.1 propanediol utilization system protease GrpL -
FG550_RS09270 (1913239) 1913239..1915791 + 2553 WP_000890295.1 glycyl radical diol dehydratase GrpM -
FG550_RS09275 (1915900) 1915900..1916817 + 918 WP_001564043.1 glycyl radical diol dehydratase-activating enzyme GrpN -
FG550_RS09280 (1916954) 1916954..1917859 + 906 WP_001564044.1 propanediol utilization system permease GrpO -
FG550_RS09285 (1918345) 1918345..1918884 + 540 WP_001564045.1 hypothetical protein -
FG550_RS09290 (1918912) 1918912..1919433 + 522 WP_000237741.1 reverse transcriptase domain-containing protein -
FG550_RS09295 (1920049) 1920049..1921311 + 1263 WP_001329690.1 propanediol utilization sensor histidine kinase GrpP -
FG550_RS09300 (1921328) 1921328..1922383 + 1056 WP_001564046.1 HTH-type transcriptional activator RhaR VF
FG550_RS09305 (1922512) 1922512..1923663 + 1152 WP_001001003.1 propanediol utilization system methionine adenosyltransferase GrpR -
FG550_RS09310 (1923708) 1923708..1924253 + 546 WP_001564047.1 propanediol utilization system shell hexameric protein GrpS -
FG550_RS09315 (1924610) 1924610..1924795 - 186 WP_223349228.1 helix-turn-helix domain-containing protein -
FG550_RS09320 (1924926) 1924926..1925597 - 672 WP_223350500.1 TetR/AcrR family transcriptional regulator -
FG550_RS09325 (1925697) 1925697..1926854 - 1158 Protein_1828 Multidrug resistance protein MexB VF
FG550_RS09330 (1926945) 1926945..1927211 + 267 Protein_1829 IS3 family transposase IS2 Transposase
FG550_RS09335 (1927197) 1927197..1927259 - 63 Protein_1830 IS3 family transposase IS2 Transposase
FG550_RS09340 (1927388) 1927388..1927513 - 126 WP_001342704.1 hypothetical protein -
FG550_RS09345 (1927510) 1927510..1927743 - 234 WP_000958492.1 AlpA family transcriptional regulator -
FG550_RS09350 (1927812) 1927812..1928387 - 576 WP_001564054.1 hypothetical protein -
FG550_RS09355 (1928645) 1928645..1929211 - 567 WP_001126810.1 inovirus-type Gp2 protein -
FG550_RS09360 (1930512) 1930512..1931606 + 1095 WP_000370278.1 sugar kinase -
FG550_RS09365 (1931625) 1931625..1932875 - 1251 WP_001328687.1 NupC/NupG family nucleoside CNT transporter -
FG550_RS09370 (1932959) 1932959..1933894 - 936 WP_001290195.1 pseudouridine-5'-phosphate glycosidase -
FG550_RS09375 (1933887) 1933887..1934822 - 936 WP_000332862.1 pseudouridine kinase -
FG550_RS09380 (1935358) 1935358..1935810 - 453 WP_000558152.1 acyltransferase -
FG550_RS09385 (1936331) 1936331..1937062 - 732 WP_001075495.1 inovirus Gp2 family protein -
FG550_RS09390 (1937732) 1937732..1938262 + 531 WP_000778605.1 hypothetical protein -
FG550_RS09395 (1939425) 1939425..1940648 - 1224 WP_001107219.1 hypothetical protein -
FG550_RS09400 (1940749) 1940749..1941633 + 885 WP_001564055.1 YfjP family GTPase -
FG550_RS09405 (1941836) 1941836..1942516 + 681 WP_001278649.1 WYL domain-containing protein -
FG550_RS09410 (1942667) 1942667..1943344 + 678 WP_001564058.1 hypothetical protein -
FG550_RS09415 (1943350) 1943350..1943583 + 234 WP_001278293.1 DUF905 family protein -
FG550_RS09420 (1943673) 1943673..1944491 + 819 WP_001564059.1 DUF932 domain-containing protein -
FG550_RS09425 (1944757) 1944757..1945236 + 480 WP_001564060.1 antirestriction protein -
FG550_RS09430 (1945252) 1945252..1945728 + 477 WP_021553055.1 RadC family protein -
FG550_RS09435 (1945793) 1945793..1946014 + 222 WP_000692345.1 DUF987 domain-containing protein -
FG550_RS09440 (1946177) 1946177..1946545 + 369 WP_021553056.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
FG550_RS09445 (1946635) 1946635..1947012 + 378 WP_001564063.1 TA system toxin CbtA family protein Toxin Detail
FG550_RS09450 (1947009) 1947009..1947158 + 150 Protein_1853 DUF5983 family protein -
FG550_RS09455 (1947237) 1947237..1947431 + 195 WP_024181941.1 DUF957 domain-containing protein -
FG550_RS09460 (1947516) 1947516..1948358 + 843 Protein_1855 DUF4942 domain-containing protein -
FG550_RS09465 (1948701) 1948701..1948871 + 171 Protein_1856 IS110 family transposase ISEc32 Transposase
FG550_RS09470 (1949681) 1949681..1950664 + 984 WP_001296394.1 Arabinose 5-phosphate isomerase KpsF VF
FG550_RS09475 (1950736) 1950736..1951884 + 1149 WP_000905920.1 hypothetical protein VF
FG550_RS09480 (1951908) 1951908..1953584 + 1677 WP_001564067.1 Polysialic acid transport protein KpsD VF
FG550_RS09485 (1953594) 1953594..1954334 + 741 WP_000030749.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
FG550_RS09490 (1954331) 1954331..1956358 + 2028 WP_000579513.1 hypothetical protein VF
FG550_RS09495 (1956393) 1956393..1957562 + 1170 WP_001161856.1 hypothetical protein VF
FG550_RS09500 (1957901) 1957901..1959079 - 1179 WP_001305084.1 UDP-glucose 6-dehydrogenase VF
FG550_RS09505 (1959121) 1959121..1960683 - 1563 WP_001305085.1 hypothetical protein VF
FG550_RS09510 (1960844) 1960844..1961878 + 1035 Protein_1865 IS481 family transposase -
FG550_RS09515 (1961975) 1961975..1963666 - 1692 WP_001332750.1 hypothetical protein VF
FG550_RS09520 (1964098) 1964098..1964814 - 717 WP_000634338.1 K5 polysaccharide biosynthesis alpha-UDP-GlcNAc glycosyltransferase KfiA -
FG550_RS09525 (1965265) 1965265..1965467 - 203 Protein_1868 transposase -
FG550_RS09530 (1965799) 1965799..1966473 - 675 WP_000590243.1 Polysialic acid transport ATP-binding protein KpsT VF
FG550_RS09535 (1966470) 1966470..1967246 - 777 WP_000124291.1 Polysialic acid transport protein KpsM VF
FG550_RS09540 (1968304) 1968304..1968840 - 537 WP_000942771.1 Type II secretion system protein M VF
FG550_RS09545 (1968842) 1968842..1970020 - 1179 WP_000095005.1 hypothetical protein VF
FG550_RS09550 (1970017) 1970017..1970994 - 978 WP_000633242.1 Putative type II secretion system protein K VF
FG550_RS09555 (1970991) 1970991..1971596 - 606 WP_001254776.1 Type II secretion system protein J VF
FG550_RS09560 (1971593) 1971593..1971964 - 372 WP_000820092.1 hypothetical protein VF
FG550_RS09565 (1971961) 1971961..1972524 - 564 WP_001115117.1 Type II secretion system protein H VF
FG550_RS09570 (1972528) 1972528..1972983 - 456 WP_001087296.1 Type II secretion system protein G VF
FG550_RS09575 (1973000) 1973000..1974208 - 1209 WP_268101397.1 Type II secretion system protein F VF
FG550_RS09580 (1974208) 1974208..1975701 - 1494 WP_000249375.1 Type II secretion system protein E VF
FG550_RS09585 (1975701) 1975701..1977761 - 2061 WP_001468189.1 Secretin GspD 2 VF
FG550_RS09590 (1977791) 1977791..1978750 - 960 WP_024189718.1 Type II secretion system protein C 2 VF
FG550_RS09595 (1978768) 1978768..1979178 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
FG550_RS09600 (1979244) 1979244..1980053 - 810 WP_001305093.1 Prepilin peptidase PppA VF
FG550_RS09605 (1980183) 1980183..1984748 - 4566 WP_016247683.1 hypothetical protein VF
FG550_RS09610 (1985231) 1985231..1986913 - 1683 WP_000259302.1 glycolate permease GlcA -
FG550_RS09615 (1987268) 1987268..1989439 - 2172 WP_001551642.1 malate synthase G -
FG550_RS09620 (1989461) 1989461..1989865 - 405 WP_000853256.1 GlcG family protein -
FG550_RS09625 (1989870) 1989870..1991093 - 1224 WP_001194653.1 glycolate oxidase subunit GlcF -
FG550_RS09630 (1991104) 1991104..1992156 - 1053 WP_000943083.1 glycolate oxidase subunit GlcE -
FG550_RS09635 (1992156) 1992156..1993655 - 1500 WP_000026123.1 glycolate oxidase subunit GlcD -
FG550_RS09640 (1993906) 1993906..1994670 + 765 WP_001308944.1 transcriptional regulator GlcC -
FG550_RS09645 (1994677) 1994677..1995819 - 1143 WP_001551643.1 protein YghO -
FG550_RS09650 (1996190) 1996190..1997911 + 1722 WP_155104772.1 2-succinylbenzoate--CoA ligase VF
FG550_RS09655 (1997908) 1997908..1998822 + 915 WP_001551645.1 NAD-dependent epimerase/dehydratase family protein -
FG550_RS09660 (1998854) 1998854..1999102 + 249 WP_000248097.1 acyl carrier protein -
FG550_RS09665 (1999102) 1999102..2000274 + 1173 WP_000524940.1 8-amino-7-oxononanoate synthase VF
FG550_RS09670 (2000309) 2000309..2001388 - 1080 WP_001315007.1 LPS export ABC transporter permease LptG -
FG550_RS09675 (2001385) 2001385..2002455 - 1071 WP_000779651.1 LPS export ABC transporter permease LptF -
FG550_RS09680 (2002486) 2002486..2003046 - 561 WP_001551646.1 YtfJ family protein -
FG550_RS09685 (2003046) 2003046..2003882 - 837 WP_001551647.1 hypothetical protein -
FG550_RS09690 (2003882) 2003882..2005231 - 1350 WP_000896889.1 lipopolysaccharide biosynthesis protein -
FG550_RS09695 (2005277) 2005277..2006035 - 759 WP_001551649.1 hypothetical protein -
FG550_RS09700 (2006067) 2006067..2006780 - 714 WP_001076239.1 dTMP kinase -
FG550_RS09705 (2006954) 2006954..2007646 + 693 WP_001190784.1 dTMP kinase -
FG550_RS09710 (2007695) 2007695..2009194 - 1500 WP_000933277.1 inorganic phosphate transporter PitB -
FG550_RS09715 (2009486) 2009486..2011345 - 1860 WP_001295514.1 bifunctional glutathionylspermidine amidase/synthase -
FG550_RS09720 (2011550) 2011550..2012416 + 867 WP_001400742.1 glutathione-dependent disulfide-bond oxidoreductase -
FG550_RS09725 (2012486) 2012486..2012734 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
FG550_RS09730 (2012747) 2012747..2013088 - 342 WP_001551651.1 hydrogenase maturation nickel metallochaperone HypA -
FG550_RS09735 (2013081) 2013081..2013569 - 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
FG550_RS09740 (2013562) 2013562..2014056 - 495 WP_001221954.1 HyaD/HybD family hydrogenase maturation endopeptidase -
FG550_RS09745 (2014056) 2014056..2015759 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
FG550_RS09750 (2015756) 2015756..2016934 - 1179 WP_000017694.1 Ni/Fe-hydrogenase cytochrome b subunit -
FG550_RS09755 (2016924) 2016924..2017910 - 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
FG550_RS09760 (2017913) 2017913..2019031 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
FG550_RS09765 (2019220) 2019220..2019507 - 288 WP_001059139.1 DUF2623 family protein YghW -
FG550_RS09770 (2019626) 2019626..2020513 - 888 WP_001551652.1 YghX family hydrolase -
FG550_RS09775 (2020670) 2020670..2021710 + 1041 WP_000262171.1 L-glyceraldehyde 3-phosphate reductase -
FG550_RS09780 (2021750) 2021750..2022244 - 495 WP_000439331.1 TIGR00645 family protein -
FG550_RS09785 (2022435) 2022435..2023319 + 885 WP_000018777.1 NADP(+)-dependent aldehyde reductase -
FG550_RS09790 (2023358) 2023358..2023783 - 426 WP_001240712.1 TonB system transport protein ExbD -
FG550_RS09795 (2023790) 2023790..2024524 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
FG550_RS09800 (2024776) 2024776..2025963 + 1188 WP_001551653.1 cystathionine beta-lyase -
FG550_RS09805 (2026103) 2026103..2026762 + 660 WP_000268426.1 DedA family general envelope maintenance protein YghB -
FG550_RS09810 (2026802) 2026802..2027701 - 900 WP_001329635.1 DNA-binding transcriptional regulator YqhC -
FG550_RS09815 (2027895) 2027895..2029058 + 1164 WP_001058802.1 alcohol dehydrogenase -
FG550_RS09820 (2029163) 2029163..2029990 + 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
FG550_RS09825 (2030190) 2030190..2031116 + 927 WP_001551654.1 YbjP/YqhG family protein -
FG550_RS09830 (2031167) 2031167..2031424 + 258 WP_000848523.1 lipoprotein YqhH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance