MGE detailed information
MGE type: Prophage MGE length: 30062 bp
Accession: NZ_CP113015 Location: 1553676..1583737 Organism: Staphylococcus aureus strain Zed Replicon: chromosome
Accession: NZ_CP113015 Location: 1553676..1583737 Organism: Staphylococcus aureus strain Zed Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OS078_RS07840 (1548795) | 1548795..1551578 | + | 2784 | WP_001056227.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| OS078_RS07845 (1551799) | 1551799..1553325 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| OS078_RS07850 (1553676) | 1553676..1554698 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| OS078_RS07855 (1555033) | 1555033..1555503 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| OS078_RS07860 (1555844) | 1555844..1556530 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| OS078_RS07865 (1556887) | 1556887..1557087 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| OS078_RS07870 (1557583) | 1557583..1557801 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| OS078_RS07875 (1557863) | 1557863..1558147 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| OS078_RS07880 (1558235) | 1558235..1558804 | - | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
| OS078_RS07885 (1558992) | 1558992..1559180 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| OS078_RS07890 (1559209) | 1559209..1559469 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| OS078_RS07895 (1559810) | 1559810..1560013 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| OS078_RS07900 (1560010) | 1560010..1560246 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| OS078_RS07905 (1560471) | 1560471..1561052 | + | 582 | WP_001140686.1 | histidine phosphatase family protein | - |
| OS078_RS07910 (1561125) | 1561125..1561742 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| OS078_RS07915 (1561897) | 1561897..1562391 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| OS078_RS07920 (1562790) | 1562790..1563212 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| OS078_RS07925 (1563360) | 1563360..1564076 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| OS078_RS07930 (1564159) | 1564159..1564698 | + | 540 | WP_000422909.1 | nitroreductase | - |
| OS078_RS07935 (1564848) | 1564848..1565168 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| OS078_RS07940 (1565312) | 1565312..1565668 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| OS078_RS07945 (1565826) | 1565826..1566206 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| OS078_RS07950 (1566385) | 1566385..1567263 | + | 879 | WP_000932216.1 | YwqG family protein | - |
| OS078_RS07955 (1568005) | 1568005..1568391 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| OS078_RS07960 (1568384) | 1568384..1568680 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| OS078_RS07965 (1568930) | 1568930..1569955 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| OS078_RS07970 (1569948) | 1569948..1570643 | + | 696 | WP_023180111.1 | methionine ABC transporter permease | - |
| OS078_RS07975 (1570661) | 1570661..1571482 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| OS078_RS07980 (1571626) | 1571626..1572846 | - | 1221 | WP_000264182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OS078_RS07985 (1572934) | 1572934..1573662 | - | 729 | WP_000733773.1 | hypothetical protein | VF |
| OS078_RS07990 (1573686) | 1573686..1574414 | - | 729 | WP_001033317.1 | hypothetical protein | VF |
| OS078_RS07995 (1574589) | 1574589..1575323 | - | 735 | WP_000142630.1 | helix-turn-helix transcriptional regulator | - |
| OS078_RS08000 (1575473) | 1575473..1575685 | + | 213 | WP_001063624.1 | ISNCY family transposase ISH7A | Transposase |
| OS078_RS08005 (1575686) | 1575686..1575958 | + | 273 | WP_001138298.1 | helix-turn-helix domain-containing protein | - |
| OS078_RS08010 (1575970) | 1575970..1576116 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| OS078_RS08015 (1576109) | 1576109..1576318 | + | 210 | WP_001058492.1 | hypothetical protein | Antitoxin Detail |
| OS078_RS08020 (1576321) | 1576321..1576614 | + | 294 | WP_001103946.1 | DUF1474 family protein | Toxin Detail |
| OS078_RS08025 (1576702) | 1576702..1577571 | + | 870 | WP_001002691.1 | primase alpha helix C-terminal domain-containing protein | - |
| OS078_RS08030 (1577588) | 1577588..1579045 | + | 1458 | WP_000432707.1 | virulence-associated E family protein | - |
| OS078_RS08035 (1579347) | 1579347..1579709 | + | 363 | WP_001039172.1 | hypothetical protein | - |
| OS078_RS08040 (1579711) | 1579711..1579995 | + | 285 | WP_000998180.1 | hypothetical protein | - |
| OS078_RS08045 (1579992) | 1579992..1580633 | + | 642 | WP_267793744.1 | pathogenicity island protein | - |
| OS078_RS08050 (1581082) | 1581082..1581423 | + | 342 | WP_001190616.1 | hypothetical protein | - |
| OS078_RS08055 (1581435) | 1581435..1582013 | + | 579 | WP_000846279.1 | hypothetical protein | - |
| OS078_RS08060 (1582031) | 1582031..1582249 | + | 219 | WP_000448776.1 | capsid morphogenesis B protein | - |
| OS078_RS08065 (1582300) | 1582300..1582827 | + | 528 | WP_000771365.1 | spore coat protein | - |
| OS078_RS08070 (1582959) | 1582959..1583171 | + | 213 | WP_025174984.1 | hypothetical protein | - |
| OS078_RS08075 (1583168) | 1583168..1583737 | + | 570 | WP_001281786.1 | terminase small subunit | - |
| OS078_RS08080 (1584166) | 1584166..1584684 | + | 519 | WP_000624990.1 | hypothetical protein | - |
| OS078_RS08085 (1584681) | 1584681..1585109 | + | 429 | WP_267836447.1 | hypothetical protein | - |
| OS078_RS08090 (1585096) | 1585096..1585875 | + | 780 | WP_000705255.1 | hypothetical protein | - |
| OS078_RS08095 (1586398) | 1586398..1586592 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| OS078_RS08100 (1586825) | 1586825..1587676 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|