MGE detailed information
MGE type: Prophage MGE length: 38400 bp
Accession: NZ_CP113007 Location: 2441072..2479471 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Accession: NZ_CP113007 Location: 2441072..2479471 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OS082_RS12390 (2437133) | 2437133..2437984 | + | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| OS082_RS12395 (2438217) | 2438217..2438411 | - | 195 | WP_000752917.1 | CsbD family protein | - |
| OS082_RS12400 (2438934) | 2438934..2439713 | - | 780 | WP_000705255.1 | hypothetical protein | - |
| OS082_RS12405 (2439700) | 2439700..2440128 | - | 429 | WP_267810024.1 | hypothetical protein | - |
| OS082_RS12410 (2440125) | 2440125..2440643 | - | 519 | WP_000624990.1 | hypothetical protein | - |
| OS082_RS12415 (2441072) | 2441072..2441641 | - | 570 | WP_001281786.1 | terminase small subunit | - |
| OS082_RS12420 (2441638) | 2441638..2441850 | - | 213 | WP_025174984.1 | hypothetical protein | - |
| OS082_RS12425 (2441982) | 2441982..2442509 | - | 528 | WP_000771365.1 | spore coat protein | - |
| OS082_RS12430 (2442560) | 2442560..2442778 | - | 219 | WP_000448776.1 | capsid morphogenesis B protein | - |
| OS082_RS12435 (2442796) | 2442796..2443374 | - | 579 | WP_000846279.1 | hypothetical protein | - |
| OS082_RS12440 (2443386) | 2443386..2443727 | - | 342 | WP_001190616.1 | hypothetical protein | - |
| OS082_RS12445 (2444176) | 2444176..2444817 | - | 642 | WP_267793744.1 | pathogenicity island protein | - |
| OS082_RS12450 (2444814) | 2444814..2445098 | - | 285 | WP_000998180.1 | hypothetical protein | - |
| OS082_RS12455 (2445100) | 2445100..2445462 | - | 363 | WP_001039172.1 | hypothetical protein | - |
| OS082_RS12460 (2445764) | 2445764..2447221 | - | 1458 | WP_000432707.1 | virulence-associated E family protein | - |
| OS082_RS12465 (2447238) | 2447238..2448107 | - | 870 | WP_001002691.1 | primase alpha helix C-terminal domain-containing protein | - |
| OS082_RS12470 (2448195) | 2448195..2448488 | - | 294 | WP_001103946.1 | DUF1474 family protein | Toxin Detail |
| OS082_RS12475 (2448491) | 2448491..2448700 | - | 210 | WP_001058492.1 | hypothetical protein | Antitoxin Detail |
| OS082_RS12480 (2448693) | 2448693..2448839 | - | 147 | WP_000784885.1 | hypothetical protein | - |
| OS082_RS12485 (2448851) | 2448851..2449123 | - | 273 | WP_001138298.1 | helix-turn-helix domain-containing protein | - |
| OS082_RS12490 (2449124) | 2449124..2449336 | - | 213 | WP_001063624.1 | ISNCY family transposase ISH7A | Transposase |
| OS082_RS12495 (2449486) | 2449486..2450220 | + | 735 | WP_000142630.1 | helix-turn-helix transcriptional regulator | - |
| OS082_RS12500 (2450395) | 2450395..2451123 | + | 729 | WP_001033317.1 | hypothetical protein | VF |
| OS082_RS12505 (2451147) | 2451147..2451875 | + | 729 | WP_000733773.1 | hypothetical protein | VF |
| OS082_RS12510 (2451963) | 2451963..2453183 | + | 1221 | WP_000264182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OS082_RS12515 (2453327) | 2453327..2454148 | - | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| OS082_RS12520 (2454166) | 2454166..2454861 | - | 696 | WP_023180111.1 | methionine ABC transporter permease | - |
| OS082_RS12525 (2454854) | 2454854..2455879 | - | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| OS082_RS12530 (2456129) | 2456129..2456425 | - | 297 | WP_001065801.1 | thioredoxin family protein | - |
| OS082_RS12535 (2456418) | 2456418..2456804 | - | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| OS082_RS12540 (2457546) | 2457546..2458424 | - | 879 | WP_000932216.1 | YwqG family protein | - |
| OS082_RS12545 (2458603) | 2458603..2458983 | - | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| OS082_RS12550 (2459141) | 2459141..2459497 | - | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| OS082_RS12555 (2459641) | 2459641..2459961 | + | 321 | WP_001190695.1 | thioredoxin family protein | - |
| OS082_RS12560 (2460111) | 2460111..2460650 | - | 540 | WP_000422909.1 | nitroreductase | - |
| OS082_RS12565 (2460733) | 2460733..2461449 | - | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| OS082_RS12570 (2461597) | 2461597..2462019 | + | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| OS082_RS12575 (2462418) | 2462418..2462912 | + | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| OS082_RS12580 (2463067) | 2463067..2463684 | + | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| OS082_RS12585 (2463757) | 2463757..2464338 | - | 582 | WP_001140686.1 | histidine phosphatase family protein | - |
| OS082_RS12590 (2464563) | 2464563..2464799 | + | 237 | WP_000368687.1 | hypothetical protein | - |
| OS082_RS12595 (2464796) | 2464796..2464999 | - | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| OS082_RS12600 (2465340) | 2465340..2465600 | + | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| OS082_RS12605 (2465629) | 2465629..2465817 | + | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| OS082_RS12610 (2466005) | 2466005..2466574 | + | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
| OS082_RS12615 (2466662) | 2466662..2466946 | + | 285 | WP_001004395.1 | hypothetical protein | - |
| OS082_RS12620 (2467008) | 2467008..2467226 | + | 219 | WP_000005886.1 | hypothetical protein | - |
| OS082_RS12625 (2467723) | 2467723..2467923 | - | 201 | WP_001059082.1 | cold-shock protein | - |
| OS082_RS12630 (2468280) | 2468280..2468966 | - | 687 | WP_001548082.1 | thermonuclease family protein | - |
| OS082_RS12635 (2469307) | 2469307..2469777 | - | 471 | WP_000824472.1 | hypothetical protein | VF |
| OS082_RS12640 (2470112) | 2470112..2471134 | - | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| OS082_RS12645 (2471485) | 2471485..2473011 | - | 1527 | WP_000791729.1 | Staphylocoagulase | VF |
| OS082_RS12650 (2473232) | 2473232..2476015 | - | 2784 | WP_001056227.1 | Clumping factor A | VF |
| OS082_RS12655 (2476278) | 2476278..2476808 | - | 531 | WP_001167175.1 | N-acetyltransferase | - |
| OS082_RS12660 (2476947) | 2476947..2477468 | - | 522 | WP_000608179.1 | hypothetical protein | - |
| OS082_RS12665 (2477476) | 2477476..2477631 | - | 156 | WP_001790158.1 | hypothetical protein | - |
| OS082_RS12670 (2478067) | 2478067..2478794 | + | 728 | Protein_2472 | DUF5067 domain-containing protein | - |
| OS082_RS12675 (2478986) | 2478986..2479132 | + | 147 | WP_001057759.1 | hypothetical protein | - |
| OS082_RS12680 (2479148) | 2479148..2479471 | + | 324 | WP_001058299.1 | hypothetical protein | - |
| OS082_RS12690 (2480793) | 2480793..2481257 | - | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| OS082_RS12695 (2481279) | 2481279..2483651 | - | 2373 | WP_267810025.1 | ribonuclease R | - |
| OS082_RS12700 (2483685) | 2483685..2484425 | - | 741 | WP_001165952.1 | carboxylesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|