MGE detailed information
MGE type: Prophage MGE length: 57524 bp
Accession: NZ_CP113007 Location: 1197465..1254988 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Accession: NZ_CP113007 Location: 1197465..1254988 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OS082_RS05990 (1192563) | 1192563..1192697 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| OS082_RS05995 (1193294) | 1193294..1194079 | - | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| OS082_RS06000 (1194440) | 1194440..1195066 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| OS082_RS06005 (1195263) | 1195263..1196522 | + | 1260 | WP_000120305.1 | SdrH family protein | - |
| OS082_RS06010 (1196547) | 1196547..1197290 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| OS082_RS06015 (1197465) | 1197465..1197749 | + | 285 | WP_000917288.1 | co-chaperone GroES | - |
| OS082_RS06020 (1197825) | 1197825..1199441 | + | 1617 | WP_000240653.1 | 60 kDa chaperonin | VF |
| OS082_RS06025 (1199536) | 1199536..1200082 | - | 547 | Protein_1188 | site-specific integrase | - |
| OS082_RS06030 (1200143) | 1200143..1200355 | + | 213 | WP_000128898.1 | hypothetical protein | - |
| OS082_RS06035 (1200352) | 1200352..1200942 | + | 591 | WP_001293058.1 | terminase small subunit | - |
| OS082_RS06040 (1201260) | 1201260..1201696 | + | 437 | Protein_1191 | hypothetical protein | - |
| OS082_RS06045 (1201802) | 1201802..1202245 | + | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| OS082_RS06050 (1203098) | 1203098..1204426 | - | 1329 | WP_108630811.1 | TrkH family potassium uptake protein | - |
| OS082_RS06055 (1204566) | 1204566..1205477 | + | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| OS082_RS06060 (1205539) | 1205539..1206382 | + | 844 | Protein_1195 | class I SAM-dependent methyltransferase | - |
| OS082_RS06065 (1206754) | 1206754..1207977 | - | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| OS082_RS06070 (1208412) | 1208412..1209467 | + | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| OS082_RS06075 (1209489) | 1209489..1210505 | + | 1017 | WP_267788002.1 | putative leukocidin-like protein 1 | VF |
| OS082_RS06080 (1210743) | 1210743..1211570 | - | 828 | Protein_1199 | Phospholipase C | VF |
| OS082_RS06085 (1211624) | 1211624..1212661 | - | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OS082_RS06090 (1212720) | 1212720..1213184 | - | 465 | WP_000825947.1 | hypothetical protein | - |
| OS082_RS06095 (1213284) | 1213284..1213466 | - | 183 | WP_000705248.1 | hypothetical protein | - |
| OS082_RS06100 (1213670) | 1213670..1214011 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| OS082_RS06105 (1214017) | 1214017..1214949 | - | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| OS082_RS06110 (1214965) | 1214965..1215678 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| OS082_RS06115 (1215641) | 1215641..1215814 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| OS082_RS06120 (1215811) | 1215811..1216074 | + | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| OS082_RS06125 (1216090) | 1216090..1216305 | + | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| OS082_RS06130 (1216294) | 1216294..1216623 | - | 330 | WP_000180411.1 | hypothetical protein | - |
| OS082_RS06135 (1216674) | 1216674..1217423 | + | 750 | WP_001148653.1 | phage antirepressor KilAC domain-containing protein | - |
| OS082_RS06140 (1217439) | 1217439..1217636 | + | 198 | WP_001148861.1 | hypothetical protein | - |
| OS082_RS06145 (1217667) | 1217667..1217807 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| OS082_RS06150 (1217822) | 1217822..1218454 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| OS082_RS06155 (1218513) | 1218513..1218833 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| OS082_RS06160 (1218830) | 1218830..1218991 | + | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| OS082_RS06165 (1219081) | 1219081..1219410 | + | 330 | WP_000138304.1 | hypothetical protein | - |
| OS082_RS06170 (1219391) | 1219391..1219651 | + | 261 | WP_001814567.1 | DUF1108 family protein | - |
| OS082_RS06175 (1219660) | 1219660..1219923 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| OS082_RS06180 (1219932) | 1219932..1221875 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| OS082_RS06185 (1221877) | 1221877..1222797 | + | 921 | WP_000180598.1 | recombinase RecT | - |
| OS082_RS06190 (1222878) | 1222878..1223495 | + | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| OS082_RS06195 (1223496) | 1223496..1223966 | + | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| OS082_RS06200 (1223996) | 1223996..1224889 | + | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| OS082_RS06205 (1224896) | 1224896..1225114 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| OS082_RS06210 (1225123) | 1225123..1225527 | + | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OS082_RS06215 (1225540) | 1225540..1225912 | + | 373 | Protein_1226 | SA1788 family PVL leukocidin-associated protein | - |
| OS082_RS06220 (1225912) | 1225912..1226169 | + | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| OS082_RS06225 (1226166) | 1226166..1226414 | + | 249 | WP_000178986.1 | SAV1978 family virulence-associated passenger protein | - |
| OS082_RS06230 (1226479) | 1226479..1226928 | + | 450 | WP_000982711.1 | YopX family protein | - |
| OS082_RS06235 (1226925) | 1226925..1227209 | + | 285 | WP_001105604.1 | hypothetical protein | - |
| OS082_RS06240 (1227202) | 1227202..1227327 | + | 126 | Protein_1231 | DUF1024 family protein | - |
| OS082_RS06245 (1227684) | 1227684..1228094 | + | 411 | WP_000197967.1 | hypothetical protein | - |
| OS082_RS06250 (1228087) | 1228087..1228623 | + | 537 | WP_001066444.1 | dUTPase | - |
| OS082_RS06255 (1228660) | 1228660..1228866 | + | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| OS082_RS06260 (1228863) | 1228863..1229249 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| OS082_RS06265 (1229246) | 1229246..1229395 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| OS082_RS06270 (1229395) | 1229395..1229595 | + | 201 | WP_000265039.1 | DUF1514 family protein | - |
| OS082_RS06275 (1229623) | 1229623..1230039 | + | 417 | WP_000590126.1 | hypothetical protein | - |
| OS082_RS06280 (1230271) | 1230271..1230570 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| OS082_RS06285 (1230701) | 1230701..1231045 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| OS082_RS06290 (1231042) | 1231042..1232703 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| OS082_RS06295 (1232719) | 1232719..1233906 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| OS082_RS06300 (1233890) | 1233890..1234627 | + | 738 | WP_000861914.1 | Clp protease ClpP | - |
| OS082_RS06305 (1234651) | 1234651..1235796 | + | 1146 | WP_000154555.1 | phage major capsid protein | - |
| OS082_RS06310 (1235816) | 1235816..1236100 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| OS082_RS06315 (1236090) | 1236090..1236374 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| OS082_RS06320 (1236358) | 1236358..1236720 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| OS082_RS06325 (1236717) | 1236717..1237121 | + | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| OS082_RS06330 (1237118) | 1237118..1237525 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| OS082_RS06335 (1237526) | 1237526..1238170 | + | 645 | WP_000268741.1 | phage tail protein | - |
| OS082_RS06340 (1238206) | 1238206..1238436 | + | 231 | Protein_1251 | Ig-like domain-containing protein | - |
| OS082_RS06345 (1238486) | 1238486..1238836 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| OS082_RS06350 (1238890) | 1238890..1239024 | + | 135 | WP_000364140.1 | hypothetical protein | - |
| OS082_RS06355 (1239081) | 1239081..1243610 | + | 4530 | WP_001795393.1 | phage tail tape measure protein | - |
| OS082_RS06360 (1243607) | 1243607..1245091 | + | 1485 | WP_267786538.1 | phage tail family protein | - |
| OS082_RS06365 (1245107) | 1245107..1248889 | + | 3783 | WP_000582173.1 | phage tail spike protein | - |
| OS082_RS06370 (1248882) | 1248882..1249034 | + | 153 | WP_001000059.1 | hypothetical protein | - |
| OS082_RS06375 (1249080) | 1249080..1249367 | + | 288 | WP_001262621.1 | hypothetical protein | - |
| OS082_RS06380 (1249423) | 1249423..1249797 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| OS082_RS06385 (1250170) | 1250170..1250943 | + | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| OS082_RS06390 (1251052) | 1251052..1251228 | + | 177 | WP_072482930.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - (1251220) | 1251220..1251359 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1251220) | 1251220..1251359 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1251220) | 1251220..1251359 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1251220) | 1251220..1251359 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| OS082_RS06395 (1251281) | 1251281..1251388 | - | 108 | Protein_1262 | hypothetical protein | - |
| OS082_RS06400 (1251440) | 1251440..1251694 | + | 255 | WP_000611512.1 | phage holin | - |
| OS082_RS06405 (1251706) | 1251706..1252461 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| OS082_RS06410 (1252652) | 1252652..1253143 | + | 492 | WP_000920041.1 | Staphylokinase | VF |
| OS082_RS06415 (1253793) | 1253793..1254128 | + | 336 | Protein_1266 | SH3 domain-containing protein | - |
| OS082_RS06420 (1254638) | 1254638..1254988 | + | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| OS082_RS06425 (1255041) | 1255041..1255301 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| OS082_RS06430 (1255612) | 1255612..1255791 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| OS082_RS06435 (1256163) | 1256163..1256360 | - | 198 | WP_000239610.1 | phospholipase | - |
| OS082_RS06440 (1256749) | 1256749..1258804 | + | 2056 | Protein_1271 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|