MGE detailed information
MGE type: Prophage MGE length: 45800 bp
Accession: NZ_CP111004 Location: 3511955..3557754 Organism: Escherichia coli strain J53-p131 Replicon: chromosome
Accession: NZ_CP111004 Location: 3511955..3557754 Organism: Escherichia coli strain J53-p131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORI86_RS17280 (3507149) | 3507149..3508531 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| ORI86_RS17285 (3508758) | 3508758..3510725 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| ORI86_RS17290 (3510740) | 3510740..3511648 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| ORI86_RS17295 (3511943) | 3511943..3513097 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| ORI86_RS17300 (3513112) | 3513112..3513177 | + | 66 | Protein_3384 | hypothetical protein | - |
| ORI86_RS17305 (3513191) | 3513191..3513541 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| ORI86_RS17310 (3513564) | 3513564..3513812 | + | 249 | Protein_3386 | IS3 family transposase ISEhe3 | Transposase |
| ORI86_RS17315 (3513822) | 3513822..3513995 | - | 174 | Protein_3387 | IS30 family transposase | - |
| ORI86_RS17320 (3514051) | 3514051..3514748 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| ORI86_RS17325 (3514765) | 3514765..3515112 | + | 348 | Protein_3389 | ABC transporter permease subunit | - |
| ORI86_RS17330 (3515124) | 3515124..3516170 | + | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| ORI86_RS17335 (3516279) | 3516279..3517211 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| ORI86_RS17340 (3517198) | 3517198..3518601 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| ORI86_RS17345 (3518845) | 3518845..3519825 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| ORI86_RS17350 (3520044) | 3520044..3521099 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| ORI86_RS17355 (3521138) | 3521138..3521539 | - | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| - (3522257) | 3522257..3522337 | - | 81 | NuclAT_12 | - | - |
| - (3522257) | 3522257..3522337 | - | 81 | NuclAT_12 | - | - |
| - (3522257) | 3522257..3522337 | - | 81 | NuclAT_12 | - | - |
| - (3522257) | 3522257..3522337 | - | 81 | NuclAT_12 | - | - |
| ORI86_RS17360 (3521597) | 3521597..3522841 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| ORI86_RS17365 (3522933) | 3522933..3523391 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| ORI86_RS17370 (3523652) | 3523652..3525109 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| ORI86_RS17375 (3525166) | 3525166..3525687 | - | 522 | Protein_3399 | peptide chain release factor H | - |
| ORI86_RS17380 (3525683) | 3525683..3525889 | - | 207 | Protein_3400 | RtcB family protein | - |
| ORI86_RS17385 (3526207) | 3526207..3526659 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| ORI86_RS17390 (3526669) | 3526669..3527067 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ORI86_RS17395 (3527070) | 3527070..3527363 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ORI86_RS17400 (3527415) | 3527415..3528470 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| ORI86_RS17405 (3528541) | 3528541..3529326 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| ORI86_RS17410 (3529298) | 3529298..3531010 | + | 1713 | Protein_3406 | hypothetical protein | VF |
| ORI86_RS17415 (3531234) | 3531234..3531731 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| ORI86_RS17420 (3531907) | 3531907..3532656 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| ORI86_RS17425 (3532866) | 3532866..3533126 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| ORI86_RS17430 (3533129) | 3533129..3533407 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| ORI86_RS17435 (3533563) | 3533563..3534303 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| ORI86_RS17440 (3534274) | 3534274..3535041 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| ORI86_RS17445 (3535247) | 3535247..3535825 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| ORI86_RS17450 (3536065) | 3536065..3538509 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| ORI86_RS17455 (3538552) | 3538552..3538998 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| ORI86_RS17460 (3539179) | 3539179..3539949 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| ORI86_RS17465 (3539990) | 3539990..3540268 | - | 279 | Protein_3417 | ISAs1 family transposase | - |
| ORI86_RS17470 (3540266) | 3540266..3540622 | + | 357 | Protein_3418 | hypothetical protein | - |
| ORI86_RS17475 (3540632) | 3540632..3541111 | + | 480 | WP_001236645.1 | protein YkfM | - |
| ORI86_RS17480 (3541248) | 3541248..3542033 | - | 786 | WP_001086141.1 | lipoprotein | - |
| ORI86_RS17490 (3542570) | 3542570..3543301 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| ORI86_RS17495 (3543366) | 3543366..3543833 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| ORI86_RS17500 (3543830) | 3543830..3544552 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| ORI86_RS17505 (3544586) | 3544586..3545341 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| ORI86_RS17510 (3545413) | 3545413..3546771 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| ORI86_RS17515 (3546819) | 3546819..3547415 | - | 597 | Protein_3426 | methyltransferase domain-containing protein | - |
| ORI86_RS17520 (3547446) | 3547446..3548246 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| ORI86_RS17525 (3548487) | 3548487..3549401 | + | 915 | WP_000648572.1 | HTH-type transcriptional regulator ArgP | VF |
| ORI86_RS17530 (3549398) | 3549398..3550201 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| ORI86_RS17565 (3555960) | 3555960..3556535 | - | 576 | WP_001140187.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| ORI86_RS17570 (3556723) | 3556723..3557754 | + | 1032 | WP_000594006.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| ORI86_RS17575 (3557747) | 3557747..3558400 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| ORI86_RS17580 (3558440) | 3558440..3559255 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| ORI86_RS17585 (3559373) | 3559373..3559777 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| ORI86_RS17590 (3559774) | 3559774..3560481 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| ORI86_RS17595 (3560593) | 3560593..3562311 | + | 1719 | WP_001260717.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|