MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49544 bp
Accession: NZ_CP110935 Location: 1..49544 Organism: Salmonella enterica strain CVCC 519 Replicon: plasmid unnamed
Accession: NZ_CP110935 Location: 1..49544 Organism: Salmonella enterica strain CVCC 519 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORG43_RS23265 (ORG43_23265) | 1..602 | + | 602 | Protein_0 | DUF2913 family protein | - |
| ORG43_RS23270 (ORG43_23270) | 599..1540 | - | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| ORG43_RS23275 (ORG43_23275) | 1955..3160 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| ORG43_RS23280 (ORG43_23280) | 3160..4134 | + | 975 | WP_000064274.1 | ParB family protein | - |
| ORG43_RS23285 (ORG43_23285) | 4216..5490 | - | 1275 | WP_001541560.1 | Y-family DNA polymerase | - |
| ORG43_RS23290 (ORG43_23290) | 5490..5912 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ORG43_RS23295 (ORG43_23295) | 6214..6915 | + | 702 | WP_148201696.1 | hypothetical protein | - |
| ORG43_RS23300 (ORG43_23300) | 6912..7154 | + | 243 | WP_024131413.1 | hypothetical protein | - |
| ORG43_RS23305 (ORG43_23305) | 7457..8188 | + | 732 | WP_001541558.1 | conjugal transfer complement resistance protein TraT | - |
| ORG43_RS23310 (ORG43_23310) | 8560..10749 | + | 2190 | WP_079961212.1 | type IV conjugative transfer system coupling protein TraD | - |
| ORG43_RS23315 (ORG43_23315) | 10758..11156 | - | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ORG43_RS23320 (ORG43_23320) | 11156..11383 | - | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| ORG43_RS23325 (ORG43_23325) | 11465..13955 | + | 2491 | Protein_12 | Multifunctional conjugation protein TraI | Relaxase |
| ORG43_RS23330 (ORG43_23330) | 13975..14715 | + | 741 | WP_000177630.1 | conjugal transfer pilus acetylase TraX | - |
| ORG43_RS23335 (ORG43_23335) | 14770..15333 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| ORG43_RS23340 (ORG43_23340) | 15450..15723 | + | 274 | Protein_15 | disulfide bond formation protein DsbA | - |
| ORG43_RS23345 (ORG43_23345) | 15715..15894 | + | 180 | WP_223163853.1 | disulfide bond formation protein DsbA | - |
| ORG43_RS23350 (ORG43_23350) | 15945..16114 | + | 170 | Protein_17 | phospholipase | - |
| ORG43_RS23355 (ORG43_23355) | 16225..16491 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| ORG43_RS23360 (ORG43_23360) | 16741..16818 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| ORG43_RS23365 (ORG43_23365) | 16799..17680 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| ORG43_RS23370 (ORG43_23370) | 18144..18320 | - | 177 | WP_162299956.1 | hypothetical protein | - |
| ORG43_RS23375 (ORG43_23375) | 18338..19030 | - | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| ORG43_RS23380 (ORG43_23380) | 19023..21431 | - | 2409 | WP_001541550.1 | Outer membrane usher protein FimD | VF |
| ORG43_RS23385 (ORG43_23385) | 21658..22176 | - | 519 | WP_079961207.1 | hypothetical protein | VF |
| ORG43_RS23390 (ORG43_23390) | 22451..22753 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| ORG43_RS23395 (ORG43_23395) | 23459..23845 | + | 387 | WP_001541549.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| ORG43_RS23400 (ORG43_23400) | 23898..24017 | + | 120 | Protein_27 | recombinase | - |
| ORG43_RS23405 (ORG43_23405) | 24348..25337 | - | 990 | WP_000461383.1 | RepB family plasmid replication initiator protein | - |
| ORG43_RS23410 (ORG43_23410) | 25831..26126 | - | 296 | Protein_29 | cytoplasmic protein | - |
| ORG43_RS23415 (ORG43_23415) | 26138..26566 | + | 429 | Protein_30 | hypothetical protein | - |
| ORG43_RS23420 (ORG43_23420) | 26610..27131 | - | 522 | WP_079961209.1 | hypothetical protein | - |
| ORG43_RS23425 (ORG43_23425) | 27807..28025 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ORG43_RS23430 (ORG43_23430) | 28027..28332 | + | 306 | WP_001541545.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ORG43_RS23435 (ORG43_23435) | 28334..28624 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| ORG43_RS23440 (ORG43_23440) | 28621..29142 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| ORG43_RS23445 (ORG43_23445) | 29177..29959 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| ORG43_RS23450 (ORG43_23450) | 29968..30519 | + | 552 | WP_000545754.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| ORG43_RS23455 (ORG43_23455) | 30747..31172 | + | 426 | WP_001134680.1 | CaiF/GrlA family transcriptional regulator | - |
| ORG43_RS23460 (ORG43_23460) | 31166..31651 | + | 486 | WP_000905606.1 | membrane protein | - |
| ORG43_RS23465 (ORG43_23465) | 31904..32491 | + | 588 | WP_001541543.1 | LysM peptidoglycan-binding domain-containing protein | - |
| ORG43_RS23470 (ORG43_23470) | 32386..32930 | + | 545 | Protein_41 | Invasin | VF |
| ORG43_RS23475 (ORG43_23475) | 32997..33347 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| ORG43_RS23480 (ORG43_23480) | 33404..33829 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| ORG43_RS23485 (ORG43_23485) | 33956..34606 | - | 651 | WP_001541540.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| ORG43_RS23490 (ORG43_23490) | 34867..35592 | - | 726 | WP_079961210.1 | MAPK phosphothreonine lyase | VF |
| ORG43_RS23495 (ORG43_23495) | 35873..37648 | - | 1776 | WP_079961211.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| ORG43_RS23500 (ORG43_23500) | 37700..37867 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| ORG43_RS23505 (ORG43_23505) | 37830..38597 | - | 768 | WP_001541537.1 | virulence protein SpvA | - |
| ORG43_RS23510 (ORG43_23510) | 38771..38935 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| ORG43_RS23515 (ORG43_23515) | 39109..40002 | - | 894 | WP_001541536.1 | virulence genes transcriptional activator SpvR | - |
| ORG43_RS23520 (ORG43_23520) | 40611..41648 | + | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| ORG43_RS23525 (ORG43_23525) | 41837..42862 | - | 1026 | WP_077905935.1 | ExeA family protein | - |
| ORG43_RS23530 (ORG43_23530) | 42795..44459 | - | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| ORG43_RS23535 (ORG43_23535) | 44443..45003 | - | 561 | WP_010904491.1 | Tn3 family transposase ISPsy42 | Transposase |
| ORG43_RS23540 (ORG43_23540) | 45210..45950 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| ORG43_RS23545 (ORG43_23545) | 46605..47093 | - | 489 | Protein_56 | cytoplasmic protein | - |
| ORG43_RS23550 (ORG43_23550) | 47352..48467 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| ORG43_RS23555 (ORG43_23555) | 48553..48969 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| ORG43_RS23560 (ORG43_23560) | 49072..49488 | + | 417 | WP_010904490.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|