MGE detailed information
MGE type: Conjugative plasmid MGE length: 83623 bp
Accession: NZ_CP110513 Location: 1..83623 Organism: Escherichia coli strain ws5-3 Replicon: plasmid pRWS532
Accession: NZ_CP110513 Location: 1..83623 Organism: Escherichia coli strain ws5-3 Replicon: plasmid pRWS532
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM087_RS23835 (46) | 46..1077 | + | 1032 | WP_000907868.1 | plasmid replication initiator RepA | - |
| OM087_RS23840 (1988) | 1988..2257 | + | 270 | WP_000079931.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| OM087_RS23845 (2257) | 2257..2535 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| OM087_RS23850 (2731) | 2731..3027 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| OM087_RS23855 (3372) | 3372..3959 | + | 588 | WP_032274974.1 | serine acetyltransferase | - |
| OM087_RS23860 (4241) | 4241..4834 | - | 594 | WP_069200664.1 | ProQ/FINO family protein | - |
| OM087_RS23865 (5056) | 5056..5331 | - | 276 | WP_072034596.1 | hypothetical protein | - |
| OM087_RS23870 (5435) | 5435..6025 | - | 591 | WP_047649953.1 | hypothetical protein | - |
| OM087_RS23875 (6025) | 6025..6282 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| OM087_RS23880 (6852) | 6852..7166 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| OM087_RS23885 (7228) | 7228..7998 | + | 771 | WP_223349459.1 | hypothetical protein | - |
| OM087_RS23890 (8043) | 8043..8828 | + | 786 | WP_277716311.1 | site-specific integrase | - |
| OM087_RS23895 (8966) | 8966..9241 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| OM087_RS23900 (9235) | 9235..9879 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| OM087_RS23905 (10108) | 10108..11079 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| OM087_RS23910 (11084) | 11084..11476 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| OM087_RS23915 (11481) | 11481..12752 | - | 1272 | WP_054170942.1 | Y-family DNA polymerase | - |
| OM087_RS23920 (12752) | 12752..13189 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OM087_RS23925 (13186) | 13186..13434 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| OM087_RS23930 (13852) | 13852..14754 | + | 903 | WP_077877352.1 | DUF1281 domain-containing protein | - |
| OM087_RS23935 (14751) | 14751..15062 | + | 312 | WP_032260789.1 | hypothetical protein | - |
| OM087_RS23940 (15138) | 15138..15821 | + | 684 | WP_000086148.1 | DNA methylase | - |
| OM087_RS23945 (15822) | 15822..16043 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| OM087_RS23950 (16024) | 16024..16491 | + | 468 | WP_014640312.1 | DUF1380 family protein | - |
| OM087_RS23955 (16537) | 16537..17313 | + | 777 | WP_001005028.1 | hypothetical protein | - |
| OM087_RS23960 (17724) | 17724..18149 | + | 426 | WP_001198902.1 | antirestriction protein | - |
| OM087_RS23965 (18196) | 18196..18618 | + | 423 | WP_001629087.1 | DUF1380 family protein | - |
| OM087_RS23970 (18615) | 18615..18806 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| OM087_RS23975 (18877) | 18877..19191 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| OM087_RS23980 (19575) | 19575..20102 | + | 528 | WP_277716312.1 | single-stranded DNA-binding protein | - |
| OM087_RS23985 (20159) | 20159..20392 | + | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| OM087_RS23990 (20454) | 20454..22412 | + | 1959 | WP_000117799.1 | ParB/RepB/Spo0J family partition protein | - |
| OM087_RS23995 (22467) | 22467..22901 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| OM087_RS24000 (22898) | 22898..23617 | + | 720 | WP_109850823.1 | plasmid SOS inhibition protein A | - |
| OM087_RS24005 (23614) | 23614..24210 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| OM087_RS24010 (24673) | 24673..25173 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| OM087_RS24015 (25902) | 25902..26336 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| OM087_RS24020 (26430) | 26430..26696 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| OM087_RS24025 (26761) | 26761..27675 | + | 915 | WP_000038401.1 | ISNCY family transposase ISRor2 | VF |
| OM087_RS24030 (27698) | 27698..27895 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| OM087_RS24035 (27926) | 27926..28177 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| OM087_RS24040 (28757) | 28757..29605 | + | 849 | WP_277716313.1 | DUF4942 domain-containing protein | - |
| OM087_RS24045 (29691) | 29691..30026 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| OM087_RS24050 (30260) | 30260..30592 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| OM087_RS24055 (30603) | 30603..33302 | + | 2700 | WP_089079273.1 | hypothetical protein | Relaxase |
| OM087_RS24060 (33339) | 33339..35630 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| OM087_RS24065 (35623) | 35623..36693 | - | 1071 | WP_000151580.1 | IncI1-type conjugal transfer protein TrbB | - |
| OM087_RS24070 (36712) | 36712..37920 | - | 1209 | WP_001303305.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (38100) | 38100..38157 | - | 58 | NuclAT_0 | - | - |
| - (38100) | 38100..38157 | - | 58 | NuclAT_0 | - | - |
| - (38100) | 38100..38157 | - | 58 | NuclAT_0 | - | - |
| - (38100) | 38100..38157 | - | 58 | NuclAT_0 | - | - |
| OM087_RS24075 (38212) | 38212..38364 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| OM087_RS24080 (38436) | 38436..38687 | - | 252 | WP_001291967.1 | hypothetical protein | - |
| OM087_RS24085 (39186) | 39186..39281 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| OM087_RS24090 (39346) | 39346..39522 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| OM087_RS24095 (39854) | 39854..40063 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| OM087_RS24100 (40135) | 40135..40797 | - | 663 | WP_160453039.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| OM087_RS24105 (40868) | 40868..43036 | - | 2169 | WP_257122961.1 | DotA/TraY family protein | - |
| OM087_RS24110 (43133) | 43133..43717 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| OM087_RS24115 (43746) | 43746..44948 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| OM087_RS24120 (44915) | 44915..45529 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| OM087_RS24125 (45529) | 45529..48573 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| OM087_RS24130 (48663) | 48663..49463 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| OM087_RS24135 (49447) | 49447..49635 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| OM087_RS24140 (49699) | 49699..50103 | - | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| OM087_RS24145 (50154) | 50154..50681 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| OM087_RS24150 (50681) | 50681..51385 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| OM087_RS24155 (51385) | 51385..52674 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| OM087_RS24160 (52677) | 52677..53660 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| OM087_RS24165 (53671) | 53671..54363 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| OM087_RS24170 (54360) | 54360..54707 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| OM087_RS24175 (54725) | 54725..58492 | - | 3768 | WP_266164679.1 | DUF5710 domain-containing protein | - |
| OM087_RS24180 (58582) | 58582..59133 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| OM087_RS24185 (59148) | 59148..59438 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| OM087_RS24190 (59435) | 59435..60583 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| OM087_RS24195 (60580) | 60580..61398 | - | 819 | WP_032220737.1 | hypothetical protein | VF |
| OM087_RS24200 (61395) | 61395..61853 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| OM087_RS24205 (62248) | 62248..62832 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| OM087_RS24210 (62892) | 62892..64094 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| OM087_RS24215 (64180) | 64180..65004 | - | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| OM087_RS24220 (65155) | 65155..66309 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| OM087_RS24225 (66308) | 66308..66592 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| OM087_RS24230 (67943) | 67943..69379 | - | 1437 | WP_015058206.1 | hypothetical protein | VF |
| OM087_RS24235 (69367) | 69367..70023 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| OM087_RS24240 (70008) | 70008..70568 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| OM087_RS24245 (70578) | 70578..71192 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| OM087_RS24250 (71209) | 71209..72294 | - | 1086 | WP_266164680.1 | hypothetical protein | VF |
| OM087_RS24255 (72307) | 72307..73860 | - | 1554 | WP_000362206.1 | hypothetical protein | VF |
| OM087_RS24260 (73871) | 73871..74323 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| OM087_RS24265 (74310) | 74310..75605 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| OM087_RS24270 (75598) | 75598..77280 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| OM087_RS24275 (77294) | 77294..77731 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| OM087_RS24280 (77731) | 77731..78798 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| OM087_RS24285 (79770) | 79770..80189 | - | 420 | WP_072115345.1 | PilI type IV pilus biogenesis protein | - |
| OM087_RS24290 (80316) | 80316..80999 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| OM087_RS24295 (81253) | 81253..81786 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| OM087_RS24300 (82228) | 82228..82515 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| OM087_RS24305 (82553) | 82553..82711 | - | 159 | Protein_94 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|