MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 135317 bp
Accession: NZ_CP110345 Location: 2775080..2910396 Organism: Pseudomonas aeruginosa strain PALA30 Replicon: chromosome
Accession: NZ_CP110345 Location: 2775080..2910396 Organism: Pseudomonas aeruginosa strain PALA30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA30_RS13290 (PALA30_02629) | 2770396..2771544 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA30_RS13295 (PALA30_02630) | 2771886..2772530 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA30_RS13300 (PALA30_02631) | 2772531..2774357 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA30_RS13305 (PALA30_02632) | 2774391..2774951 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA30_RS13315 (PALA30_02634) | 2775323..2777257 | + | 1935 | WP_023098512.1 | hypothetical protein ; Integrase | Integrase |
| PALA30_RS13320 | 2777363..2777668 | + | 306 | WP_153995462.1 | LysR substrate-binding domain-containing protein | - |
| PALA30_RS13325 (PALA30_02635) | 2777799..2780918 | - | 3120 | WP_023098513.1 | efflux RND transporter permease subunit | - |
| PALA30_RS13330 (PALA30_02636) | 2780915..2782432 | - | 1518 | WP_023098514.1 | hypothetical protein | VF |
| PALA30_RS13335 (PALA30_02637) | 2782448..2783755 | - | 1308 | WP_010791747.1 | TolC family protein | - |
| PALA30_RS13340 (PALA30_02638) | 2783831..2784142 | - | 312 | WP_006226245.1 | hypothetical protein | - |
| PALA30_RS13345 | 2784429..2785070 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA30_RS13350 | 2785178..2785483 | + | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA30_RS13355 (PALA30_02640) | 2785488..2786378 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA30_RS13360 (PALA30_02641) | 2786612..2786896 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA30_RS13365 (PALA30_02642) | 2787025..2787951 | - | 927 | WP_023098515.1 | copper homeostasis membrane protein CopD | - |
| PALA30_RS13370 (PALA30_02643) | 2787956..2788342 | - | 387 | WP_023098516.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA30_RS13375 (PALA30_02644) | 2788484..2790790 | - | 2307 | WP_228846310.1 | heavy metal translocating P-type ATPase | - |
| PALA30_RS13380 (PALA30_02645) | 2791078..2791350 | - | 273 | WP_003097518.1 | DUF2933 domain-containing protein | - |
| PALA30_RS13385 (PALA30_02646) | 2791384..2791869 | - | 486 | WP_023098517.1 | DUF411 domain-containing protein | - |
| PALA30_RS13390 (PALA30_02647) | 2791907..2792887 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA30_RS13395 (PALA30_02648) | 2792913..2794814 | - | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| PALA30_RS13400 (PALA30_02649) | 2795069..2795761 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA30_RS13405 (PALA30_02650) | 2795733..2797169 | + | 1437 | WP_003097498.1 | Sensor histidine kinase CusS | VF |
| PALA30_RS13410 (PALA30_02651) | 2797804..2798130 | + | 327 | WP_003090285.1 | DUF2933 domain-containing protein | - |
| PALA30_RS13415 (PALA30_02652) | 2798149..2798448 | + | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA30_RS13420 (PALA30_02653) | 2798457..2800124 | + | 1668 | WP_023098518.1 | DUF3141 domain-containing protein | - |
| PALA30_RS13425 (PALA30_02654) | 2800420..2801553 | + | 1134 | WP_003090282.1 | acetate/propionate family kinase | - |
| PALA30_RS13430 (PALA30_02655) | 2801771..2802223 | + | 453 | WP_009516039.1 | MerR family DNA-binding protein | - |
| PALA30_RS13435 (PALA30_02656) | 2802378..2803706 | + | 1329 | WP_023098519.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA30_RS13440 (PALA30_02657) | 2803813..2806242 | + | 2430 | WP_023098520.1 | hypothetical protein | - |
| PALA30_RS13445 (PALA30_02658) | 2806420..2807022 | - | 603 | WP_023098521.1 | hypothetical protein | VF |
| PALA30_RS13450 (PALA30_02659) | 2807128..2807958 | + | 831 | WP_023098522.1 | hypothetical protein | VF |
| PALA30_RS13455 (PALA30_02660) | 2807967..2809229 | - | 1263 | WP_023098523.1 | MgtC/SapB family protein | - |
| PALA30_RS13460 (PALA30_02661) | 2809226..2810281 | - | 1056 | WP_023098524.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA30_RS13465 (PALA30_02662) | 2810309..2811931 | - | 1623 | WP_033986479.1 | AarF/UbiB family protein | - |
| PALA30_RS13470 (PALA30_02663) | 2811928..2812959 | - | 1032 | WP_023098526.1 | hydroxyacid dehydrogenase | - |
| PALA30_RS13475 (PALA30_02664) | 2812956..2813210 | - | 255 | WP_023098527.1 | hypothetical protein | - |
| PALA30_RS13480 (PALA30_02665) | 2813207..2813851 | - | 645 | WP_003121541.1 | hypothetical protein | - |
| PALA30_RS13485 (PALA30_02666) | 2813905..2814804 | - | 900 | WP_023098528.1 | ribose-phosphate pyrophosphokinase | - |
| PALA30_RS13490 (PALA30_02667) | 2814801..2816354 | - | 1554 | WP_023098529.1 | thymidine phosphorylase family protein | - |
| PALA30_RS13495 (PALA30_02668) | 2816351..2817712 | - | 1362 | WP_003090261.1 | MBL fold metallo-hydrolase | - |
| PALA30_RS13500 (PALA30_02669) | 2817738..2818235 | - | 498 | WP_003121538.1 | TPM domain-containing protein | - |
| PALA30_RS13505 (PALA30_02670) | 2818237..2819142 | - | 906 | WP_023098530.1 | TPM domain-containing protein | - |
| PALA30_RS13510 (PALA30_02671) | 2819144..2819755 | - | 612 | WP_009516025.1 | LemA family protein | - |
| PALA30_RS13515 (PALA30_02672) | 2819752..2821059 | - | 1308 | WP_170954377.1 | MFS transporter | - |
| PALA30_RS13520 (PALA30_02673) | 2821091..2823556 | - | 2466 | WP_058176482.1 | heavy metal translocating P-type ATPase | - |
| PALA30_RS13525 (PALA30_02674) | 2823589..2824452 | - | 864 | WP_003090242.1 | polyphosphate kinase 2 | - |
| PALA30_RS13530 (PALA30_02675) | 2824463..2824621 | - | 159 | WP_010791738.1 | hypothetical protein | - |
| PALA30_RS13535 (PALA30_02676) | 2824623..2825273 | - | 651 | WP_003090238.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA30_RS13540 (PALA30_02677) | 2825270..2825509 | - | 240 | WP_003090237.1 | DUF2933 domain-containing protein | - |
| PALA30_RS13545 (PALA30_02678) | 2825521..2825922 | - | 402 | WP_003090236.1 | hypothetical protein | - |
| PALA30_RS13550 | 2826077..2826511 | - | 435 | WP_079279895.1 | hypothetical protein | - |
| PALA30_RS13555 (PALA30_02679) | 2826655..2827077 | + | 423 | WP_003090234.1 | MerR family DNA-binding protein | - |
| PALA30_RS13560 (PALA30_02680) | 2827312..2827764 | - | 453 | WP_023098533.1 | IS607 family transposase ISLhe9 | Transposase |
| PALA30_RS13565 | 2827845..2828164 | + | 320 | Protein_2680 | superoxide dismutase [Mn] | - |
| PALA30_RS13570 (PALA30_02681) | 2828266..2829399 | - | 1134 | WP_197913143.1 | MFS transporter | - |
| PALA30_RS13575 (PALA30_02682) | 2829578..2831032 | - | 1455 | WP_023098535.1 | Toluene efflux pump outer membrane protein TtgI | VF |
| PALA30_RS13580 (PALA30_02683) | 2831163..2832464 | - | 1302 | Protein_2683 | Multidrug resistance protein MexB | VF |
| PALA30_RS13585 (PALA30_02684) | 2832499..2835465 | - | 2967 | WP_023098537.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PALA30_RS13590 (PALA30_02685) | 2835468..2836028 | - | 561 | WP_003124096.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PALA30_RS13595 (PALA30_02686) | 2836159..2837148 | - | 990 | WP_003132006.1 | hypothetical protein | VF |
| PALA30_RS13600 (PALA30_02687) | 2837145..2837381 | - | 237 | WP_003132004.1 | broad-spectrum mercury transporter MerE | - |
| PALA30_RS13605 (PALA30_02688) | 2837378..2837743 | - | 366 | WP_000995360.1 | mercury resistance co-regulator MerD | - |
| PALA30_RS13610 (PALA30_02689) | 2837761..2839446 | - | 1686 | WP_023098538.1 | mercury(II) reductase | - |
| PALA30_RS13615 (PALA30_02690) | 2839518..2839793 | - | 276 | WP_003131987.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA30_RS13620 (PALA30_02691) | 2839806..2840156 | - | 351 | WP_003131974.1 | mercuric ion transporter MerT | - |
| PALA30_RS13625 (PALA30_02692) | 2840228..2840662 | + | 435 | WP_003131969.1 | mercury resistance transcriptional regulator MerR | - |
| PALA30_RS13630 (PALA30_02693) | 2840700..2842085 | - | 1386 | Protein_2693 | Efflux pump membrane transporter BepE | VF |
| PALA30_RS13635 (PALA30_02694) | 2842222..2843133 | + | 912 | WP_023098540.1 | NAD(P)H-binding protein | - |
| PALA30_RS13640 | 2843282..2843428 | + | 147 | WP_023098541.1 | MerR family DNA-binding transcriptional regulator | - |
| PALA30_RS13645 (PALA30_02696) | 2843410..2845227 | - | 1818 | WP_023098542.1 | MobH family relaxase | - |
| PALA30_RS13650 (PALA30_02697) | 2845527..2845844 | + | 318 | WP_023098543.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| PALA30_RS13655 (PALA30_02698) | 2845844..2846302 | + | 459 | WP_009518525.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| PALA30_RS13660 (PALA30_02699) | 2846329..2846706 | + | 378 | WP_009518524.1 | DUF3742 family protein | - |
| PALA30_RS13665 (PALA30_02700) | 2846722..2848239 | - | 1518 | WP_009518523.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA30_RS13670 (PALA30_02701) | 2848254..2848613 | - | 360 | WP_009518522.1 | hypothetical protein | - |
| PALA30_RS13675 (PALA30_02702) | 2848610..2850004 | - | 1395 | WP_009518521.1 | integrating conjugative element protein | - |
| PALA30_RS13680 (PALA30_02703) | 2850014..2850961 | - | 948 | WP_009518520.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA30_RS13685 (PALA30_02704) | 2850958..2851404 | - | 447 | WP_009518519.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA30_RS13690 (PALA30_02705) | 2851568..2852062 | - | 495 | WP_009518518.1 | DNA repair protein RadC | - |
| PALA30_RS13695 (PALA30_02706) | 2852238..2853002 | - | 765 | WP_023098544.1 | thioredoxin domain-containing protein | - |
| PALA30_RS13700 (PALA30_02707) | 2853027..2855918 | - | 2892 | WP_023098545.1 | conjugative transfer ATPase | - |
| PALA30_RS13705 (PALA30_02708) | 2855918..2856367 | - | 450 | WP_023098546.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA30_RS13710 (PALA30_02709) | 2856348..2857766 | - | 1419 | WP_023100422.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA30_RS13715 (PALA30_02710) | 2857756..2858667 | - | 912 | WP_023100423.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA30_RS13720 (PALA30_02711) | 2858664..2859356 | - | 693 | WP_023100424.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA30_RS13725 (PALA30_02712) | 2859353..2859751 | - | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| PALA30_RS13730 (PALA30_02713) | 2859763..2860122 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA30_RS13735 (PALA30_02714) | 2860139..2860372 | - | 234 | WP_003090170.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA30_RS13740 (PALA30_02715) | 2860369..2860752 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA30_RS13745 (PALA30_02716) | 2860956..2861426 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA30_RS13750 (PALA30_02717) | 2861423..2861998 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA30_RS13755 (PALA30_02718) | 2862016..2862930 | + | 915 | WP_016852809.1 | AAA family ATPase | - |
| PALA30_RS13760 (PALA30_02719) | 2862927..2863397 | + | 471 | WP_003090160.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA30_RS13765 (PALA30_02720) | 2863394..2863894 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA30_RS13770 (PALA30_02721) | 2863894..2864796 | + | 903 | WP_003090158.1 | CBASS oligonucleotide cyclase | - |
| PALA30_RS13775 (PALA30_02722) | 2864835..2865560 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA30_RS13780 (PALA30_02723) | 2865570..2868194 | + | 2625 | WP_023085359.1 | AAA family ATPase | - |
| PALA30_RS13785 (PALA30_02724) | 2868235..2868984 | - | 750 | WP_006226024.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA30_RS13790 (PALA30_02725) | 2868981..2871173 | - | 2193 | WP_006226023.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA30_RS13795 (PALA30_02726) | 2871178..2871726 | - | 549 | WP_006226022.1 | integrating conjugative element protein | - |
| PALA30_RS13800 (PALA30_02727) | 2871723..2872325 | - | 603 | WP_006226021.1 | transglycosylase SLT domain-containing protein | - |
| PALA30_RS13805 (PALA30_02728) | 2872307..2873032 | - | 726 | WP_003120008.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA30_RS13810 (PALA30_02729) | 2873045..2873689 | - | 645 | WP_003120009.1 | hypothetical protein | - |
| PALA30_RS13815 (PALA30_02730) | 2873686..2874264 | - | 579 | WP_016852812.1 | hypothetical protein | VF |
| PALA30_RS13820 (PALA30_02731) | 2874433..2874753 | + | 321 | WP_003120011.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA30_RS13825 (PALA30_02732) | 2874756..2875250 | + | 495 | WP_006226020.1 | arsenate reductase ArsC | - |
| PALA30_RS13830 (PALA30_02733) | 2875262..2876338 | + | 1077 | WP_006226019.1 | ACR3 family arsenite efflux transporter | - |
| PALA30_RS13835 (PALA30_02734) | 2876355..2876777 | + | 423 | WP_006217715.1 | arsenate reductase (glutaredoxin) | - |
| PALA30_RS13840 (PALA30_02735) | 2876770..2877492 | + | 723 | WP_003120015.1 | arsenical resistance protein ArsH | - |
| PALA30_RS13845 (PALA30_02736) | 2877551..2879830 | - | 2280 | WP_006226018.1 | helicase-related protein | - |
| PALA30_RS13850 (PALA30_02737) | 2879967..2880274 | - | 308 | Protein_2737 | hypothetical protein | - |
| PALA30_RS13855 (PALA30_02738) | 2880364..2880684 | - | 321 | WP_003120017.1 | hypothetical protein | - |
| PALA30_RS13860 (PALA30_02739) | 2880735..2881844 | - | 1110 | WP_006226016.1 | DUF6094 domain-containing protein | - |
| PALA30_RS13865 (PALA30_02740) | 2881909..2882559 | - | 651 | WP_006226015.1 | hypothetical protein | - |
| PALA30_RS13870 (PALA30_02741) | 2882664..2883005 | - | 342 | WP_016852814.1 | hypothetical protein | - |
| PALA30_RS13875 (PALA30_02742) | 2883108..2883434 | - | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA30_RS13880 (PALA30_02743) | 2883529..2884218 | - | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA30_RS13885 (PALA30_02744) | 2884277..2885206 | - | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA30_RS13890 (PALA30_02745) | 2885573..2885926 | - | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA30_RS13895 (PALA30_02746) | 2886068..2886880 | - | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA30_RS13900 (PALA30_02747) | 2887168..2887446 | - | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA30_RS13905 (PALA30_02748) | 2887543..2888280 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA30_RS13910 (PALA30_02749) | 2888494..2888886 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA30_RS13915 (PALA30_02750) | 2888908..2889120 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA30_RS13920 | 2889458..2889763 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA30_RS13925 (PALA30_02751) | 2890106..2890606 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA30_RS13930 (PALA30_02752) | 2890610..2893522 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA30_RS13935 (PALA30_02753) | 2893614..2894012 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA30_RS13940 | 2894467..2894670 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA30_RS13945 (PALA30_02754) | 2895088..2895723 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA30_RS13950 | 2896466..2896600 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA30_RS13955 (PALA30_02755) | 2896540..2898477 | - | 1938 | Protein_2758 | DNA topoisomerase III | - |
| PALA30_RS13960 (PALA30_02756) | 2898761..2899201 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA30_RS13965 (PALA30_02757) | 2899275..2899802 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA30_RS13970 (PALA30_02758) | 2899799..2900590 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA30_RS13975 (PALA30_02759) | 2901020..2902258 | - | 1239 | WP_006226008.1 | STY4528 family pathogenicity island replication protein | - |
| PALA30_RS13980 (PALA30_02760) | 2902262..2902822 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA30_RS13985 (PALA30_02761) | 2902837..2904516 | - | 1680 | WP_006226007.1 | ParB family protein | - |
| PALA30_RS13990 (PALA30_02762) | 2904509..2904778 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA30_RS13995 (PALA30_02763) | 2904762..2905637 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA30_RS14000 (PALA30_02764) | 2905680..2905892 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA30_RS14005 (PALA30_02765) | 2906011..2906757 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA30_RS14010 (PALA30_02766) | 2907208..2907708 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA30_RS14015 (PALA30_02767) | 2908847..2909707 | - | 861 | WP_223677416.1 | fimbrial protein | - |
| PALA30_RS14020 (PALA30_02768) | 2910539..2913517 | + | 2979 | WP_034048731.1 | transporter substrate-binding domain-containing protein | - |
| PALA30_RS14025 (PALA30_02769) | 2913608..2914141 | + | 534 | WP_003090076.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|