MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42431 bp
Accession: NZ_CP110241 Location: 1..42431 Organism: Vagococcus sp. STAA25 Replicon: plasmid unnamed4
Accession: NZ_CP110241 Location: 1..42431 Organism: Vagococcus sp. STAA25 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OL235_RS10680 (OL235_10680) | 186..593 | + | 408 | WP_275470187.1 | hypothetical protein | - |
| OL235_RS10685 (OL235_10685) | 699..914 | + | 216 | WP_275470188.1 | hypothetical protein | - |
| OL235_RS10690 (OL235_10690) | 1000..1257 | + | 258 | WP_275470189.1 | hypothetical protein | - |
| OL235_RS10695 (OL235_10695) | 1257..1964 | + | 708 | WP_275470190.1 | ERF family protein | - |
| OL235_RS10700 (OL235_10700) | 1975..2706 | + | 732 | WP_275470191.1 | putative HNHc nuclease | - |
| OL235_RS10705 (OL235_10705) | 2725..3633 | + | 909 | WP_275470192.1 | phage replisome organizer N-terminal domain-containing protein | - |
| OL235_RS10710 (OL235_10710) | 3646..3840 | + | 195 | WP_275470193.1 | hypothetical protein | - |
| OL235_RS10715 (OL235_10715) | 3818..4267 | + | 450 | WP_275470194.1 | DUF1064 domain-containing protein | - |
| OL235_RS10720 (OL235_10720) | 4276..4461 | + | 186 | WP_275470322.1 | hypothetical protein | - |
| OL235_RS10725 (OL235_10725) | 4463..4660 | + | 198 | WP_275470196.1 | hypothetical protein | - |
| OL235_RS10730 (OL235_10730) | 4676..5089 | + | 414 | WP_275470323.1 | hypothetical protein | - |
| OL235_RS10745 (OL235_10745) | 5628..5819 | + | 192 | WP_275470198.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OL235_RS10750 (OL235_10750) | 5861..6247 | + | 387 | WP_275470199.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OL235_RS10755 (OL235_10755) | 6488..6769 | + | 282 | WP_275470200.1 | hypothetical protein | - |
| OL235_RS10760 (OL235_10760) | 6805..7569 | + | 765 | WP_275470201.1 | terminase small subunit | - |
| OL235_RS10765 (OL235_10765) | 7554..8849 | + | 1296 | WP_275470202.1 | PBSX family phage terminase large subunit | - |
| OL235_RS10770 (OL235_10770) | 8860..10248 | + | 1389 | WP_275470203.1 | phage portal protein | - |
| OL235_RS10775 (OL235_10775) | 10373..10681 | + | 309 | WP_275470205.1 | ribosomal-processing cysteine protease Prp | - |
| OL235_RS10780 (OL235_10780) | 10771..11613 | + | 843 | WP_275470206.1 | hypothetical protein | - |
| OL235_RS10785 (OL235_10785) | 11800..12714 | + | 915 | WP_275470324.1 | minor capsid protein | - |
| OL235_RS10790 (OL235_10790) | 12924..13298 | + | 375 | WP_275470325.1 | polymorphic toxin type 50 domain-containing protein | - |
| OL235_RS10795 (OL235_10795) | 13295..13495 | + | 201 | WP_275470209.1 | hypothetical protein | - |
| OL235_RS10800 (OL235_10800) | 13821..14387 | + | 567 | WP_275470210.1 | DUF4355 domain-containing protein | - |
| OL235_RS10805 (OL235_10805) | 14403..15335 | + | 933 | WP_275470211.1 | phage major capsid protein | - |
| OL235_RS10810 (OL235_10810) | 15413..15730 | + | 318 | WP_275470212.1 | phage head-tail connector protein | - |
| OL235_RS10815 (OL235_10815) | 15727..16062 | + | 336 | WP_275470213.1 | hypothetical protein | - |
| OL235_RS10820 (OL235_10820) | 16064..16609 | + | 546 | WP_275470214.1 | HK97 gp10 family phage protein | - |
| OL235_RS10825 (OL235_10825) | 16609..16971 | + | 363 | WP_275470215.1 | hypothetical protein | - |
| OL235_RS10830 (OL235_10830) | 16983..17450 | + | 468 | WP_275470216.1 | phage tail tube protein | - |
| OL235_RS10835 (OL235_10835) | 17543..17728 | + | 186 | WP_275470217.1 | hypothetical protein | - |
| OL235_RS10840 (OL235_10840) | 17782..18156 | + | 375 | WP_275470218.1 | DUF6096 family protein | - |
| OL235_RS10845 (OL235_10845) | 18186..18530 | + | 345 | WP_275470219.1 | hypothetical protein | - |
| OL235_RS10850 (OL235_10850) | 18548..24112 | + | 5565 | WP_275470220.1 | transglycosylase SLT domain-containing protein | - |
| OL235_RS10855 (OL235_10855) | 24124..24486 | + | 363 | WP_275470163.1 | hypothetical protein | - |
| OL235_RS10860 (OL235_10860) | 24499..29061 | + | 4563 | WP_275470164.1 | hypothetical protein | - |
| OL235_RS10865 (OL235_10865) | 29018..29224 | + | 207 | WP_275470165.1 | hypothetical protein | - |
| OL235_RS10870 (OL235_10870) | 29224..29478 | + | 255 | WP_275470166.1 | hypothetical protein | - |
| OL235_RS10875 (OL235_10875) | 29509..29919 | + | 411 | WP_275470167.1 | phage holin family protein | - |
| OL235_RS10880 (OL235_10880) | 29952..30737 | + | 786 | WP_275470320.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OL235_RS10885 (OL235_10885) | 30893..31114 | + | 222 | WP_275470170.1 | DUF6290 family protein | Antitoxin Detail |
| OL235_RS10890 (OL235_10890) | 31111..31386 | + | 276 | WP_275470171.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OL235_RS10895 (OL235_10895) | 31752..32051 | + | 300 | WP_275470321.1 | hypothetical protein | - |
| OL235_RS10900 (OL235_10900) | 32517..33101 | - | 585 | WP_275470173.1 | ISNCY family transposase ISH7A | Transposase |
| OL235_RS10905 (OL235_10905) | 33629..33829 | + | 201 | WP_275470174.1 | cold-shock protein | - |
| OL235_RS10910 (OL235_10910) | 33887..34102 | + | 216 | WP_275470175.1 | hypothetical protein | - |
| OL235_RS10915 (OL235_10915) | 34202..34633 | - | 432 | WP_275470176.1 | helix-turn-helix transcriptional regulator | - |
| OL235_RS10920 (OL235_10920) | 34949..35302 | + | 354 | WP_275470177.1 | hypothetical protein | - |
| OL235_RS10925 (OL235_10925) | 35422..36525 | - | 1104 | WP_275470178.1 | helix-turn-helix domain-containing protein | - |
| OL235_RS10930 (OL235_10930) | 36702..36917 | - | 216 | WP_275470179.1 | hypothetical protein | - |
| OL235_RS10935 (OL235_10935) | 37047..37685 | - | 639 | WP_275470180.1 | hypothetical protein | - |
| OL235_RS10940 (OL235_10940) | 37733..38833 | - | 1101 | WP_275470181.1 | RepB family plasmid replication initiator protein | - |
| OL235_RS10945 (OL235_10945) | 39396..39839 | - | 444 | WP_275470182.1 | hypothetical protein | - |
| OL235_RS10950 (OL235_10950) | 39873..40583 | - | 711 | WP_275470183.1 | hypothetical protein | - |
| OL235_RS10955 (OL235_10955) | 40727..41434 | - | 708 | WP_275470184.1 | XRE family transcriptional regulator | - |
| OL235_RS10960 (OL235_10960) | 41612..41869 | + | 258 | WP_275470185.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|