MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP110201 Location: 2441335..2453420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Accession: NZ_CP110201 Location: 2441335..2453420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCK73_RS11895 (2437256) | 2437256..2438458 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| OCK73_RS11900 (2438471) | 2438471..2439922 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| OCK73_RS11905 (2440066) | 2440066..2441073 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| OCK73_RS11910 (2441332) | 2441332..2442798 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| OCK73_RS11915 (2443606) | 2443606..2444320 | + | 715 | Protein_2330 | helix-turn-helix domain-containing protein | - |
| OCK73_RS11920 (2444376) | 2444376..2445284 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| OCK73_RS11925 (2445427) | 2445427..2445759 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| OCK73_RS11930 (2445749) | 2445749..2445964 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| OCK73_RS11935 (2446116) | 2446116..2446364 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OCK73_RS11940 (2446354) | 2446354..2446638 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OCK73_RS11945 (2446809) | 2446809..2447198 | + | 390 | WP_000194089.1 | RidA family protein | - |
| OCK73_RS11950 (2447250) | 2447250..2448329 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| OCK73_RS11955 (2448522) | 2448522..2449010 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| OCK73_RS11960 (2449055) | 2449055..2450563 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| OCK73_RS11965 (2450553) | 2450553..2451794 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| OCK73_RS11970 (2451864) | 2451864..2453420 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| OCK73_RS11975 (2453597) | 2453597..2454883 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| OCK73_RS11980 (2454858) | 2454858..2455883 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| OCK73_RS11985 (2455942) | 2455942..2456733 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| OCK73_RS11990 (2456779) | 2456779..2457870 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |