MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP110201 Location: 1027642..1038068 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Accession: NZ_CP110201 Location: 1027642..1038068 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCK73_RS04925 (1022755) | 1022755..1023135 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| OCK73_RS04930 (1023191) | 1023191..1025758 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| OCK73_RS04935 (1025917) | 1025917..1026438 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| OCK73_RS04940 (1026610) | 1026610..1027266 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| OCK73_RS04945 (1027613) | 1027613..1027818 | + | 206 | Protein_970 | IS5 family transposase ISEcl3 | Transposase |
| OCK73_RS04950 (1027891) | 1027891..1028418 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OCK73_RS04955 (1028415) | 1028415..1028705 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OCK73_RS04960 (1028975) | 1028975..1029153 | - | 179 | Protein_973 | IS3 family transposase | - |
| OCK73_RS04965 (1029394) | 1029394..1029720 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| OCK73_RS04970 (1029993) | 1029993..1030340 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| OCK73_RS04975 (1030325) | 1030325..1030774 | - | 450 | WP_000381610.1 | membrane protein | - |
| OCK73_RS04980 (1031205) | 1031205..1031648 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| OCK73_RS04985 (1032105) | 1032105..1032755 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| OCK73_RS04990 (1032752) | 1032752..1034440 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| OCK73_RS04995 (1034437) | 1034437..1035555 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| OCK73_RS05000 (1035580) | 1035580..1037637 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| OCK73_RS05005 (1037661) | 1037661..1038068 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| OCK73_RS05010 (1038065) | 1038065..1039360 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| OCK73_RS05015 (1039338) | 1039338..1039781 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| OCK73_RS05020 (1039781) | 1039781..1040791 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| OCK73_RS05025 (1040791) | 1040791..1041702 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| OCK73_RS05030 (1041692) | 1041692..1042366 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| OCK73_RS05035 (1042392) | 1042392..1042652 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |